Miyakogusa Predicted Gene

Lj0g3v0192759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0192759.1 Non Characterized Hit- tr|B9FW46|B9FW46_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,71.67,5e-19,DDOST_48kD,Oligosaccharyl transferase complex,
subunit Wbp1;
DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROT,
NODE_22952_length_561_cov_219.115860.path2.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g069240.1 | oligosaccharyltransferase 48 kDa subunit beta ...   264   3e-71

>Medtr4g069240.1 | oligosaccharyltransferase 48 kDa subunit beta |
           HC | chr4:26027820-26022692 | 20130731
          Length = 434

 Score =  264 bits (675), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 129/145 (88%), Positives = 137/145 (94%)

Query: 29  ILVLLDDFALKSSHSIFLNSLQSRGFDLDFKLADDPKIALQRYGQYLYDGLILFCPTIER 88
           ILVLLDDFA+KSSHS++  SLQSRGFDLDFKLADDPKIALQRYGQYLYD L+LF PTIER
Sbjct: 30  ILVLLDDFAIKSSHSLYFKSLQSRGFDLDFKLADDPKIALQRYGQYLYDALVLFSPTIER 89

Query: 89  FGGSIDAAAVLDFVDSGHDLIVAADSNASDLIREIATECGVDFDEDLSAMVVDHSGYAVS 148
           FGGSIDAAA+L FVDSGHDLIVAADSNASDLIREIATECGVDFDED  A+VVDH+GYAVS
Sbjct: 90  FGGSIDAAAILAFVDSGHDLIVAADSNASDLIREIATECGVDFDEDYGAVVVDHAGYAVS 149

Query: 149 STEGDHTLIASDDLIKSDVILGSKK 173
           +TEGDHTLIASDD IKSDVILGSKK
Sbjct: 150 ATEGDHTLIASDDFIKSDVILGSKK 174