Miyakogusa Predicted Gene

Lj0g3v0192069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0192069.1 tr|Q9LFB9|Q9LFB9_ARATH At5g01170 OS=Arabidopsis
thaliana GN=F7J8_150 PE=2 SV=1,29.4,0.000000000000002,seg,NULL;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF740,Uncharacterised ,27867_g.1
         (307 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g462680.1 | DUF740 family protein | HC | chr3:25062281-250...   297   7e-81
Medtr7g066730.1 | DUF740 family protein | HC | chr7:24313566-243...   152   5e-37

>Medtr3g462680.1 | DUF740 family protein | HC |
           chr3:25062281-25064443 | 20130731
          Length = 560

 Score =  297 bits (761), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 187/323 (57%), Positives = 207/323 (64%), Gaps = 28/323 (8%)

Query: 1   MTSKTPRLTTCHRHPSQPLTGFCASCLRERLAGIESTSSASSPKLRRTKSCSGSGPDPHS 60
           MTSKT RLTTCHRHPSQP+TGFCASCL ERL+GIES  +   P+LRR+KSCSGS     +
Sbjct: 1   MTSKTRRLTTCHRHPSQPITGFCASCLTERLSGIESADA--EPELRRSKSCSGSRAGDQA 58

Query: 61  SSTAVLEPRRKSCAAAVPP---RNTLWDLFSRDD-----KPPRNVDLGNSGQ----EIRD 108
           SS+AV EPRR+SC    PP   R TL DLF+ DD     KP  N  L N  +    EI D
Sbjct: 59  SSSAV-EPRRRSCEILAPPEQNRGTLSDLFNIDDEKKKQKPGFNRCLENESRKSRFEIID 117

Query: 109 CDGVGEGIRVCVEDD---EETKTMKEFIDLELKSKKSSGRDFREIAGSFWDAASVFSKRL 165
            DG  +  RV VED+   EETKTMKEFIDLE++S K++GRD      SFWDAASVFSKRL
Sbjct: 118 FDGGCDIGRVLVEDENDEEETKTMKEFIDLEIRSGKNAGRDSSRT--SFWDAASVFSKRL 175

Query: 166 MKRRRKQSLKRNLA-----XXXXXXXXLTSVEVANQGGRNLRETQSEVGEYGFSLGRRSC 220
            K +RKQ LKRN A             L S+EV  Q  RNLRETQSEVGEYG SL RRSC
Sbjct: 176 RKWKRKQKLKRNNADCEGGVVTGNGGGLRSMEVEKQRRRNLRETQSEVGEYGLSLCRRSC 235

Query: 221 DTDPRLSVDDPRFSFEAPRASWDGYLIGKTYPRLSPMVPFNG--VVDGMVXXXXXXXXXX 278
           DTDPRLSVDD RFSF+APRASWDGYLIGKT  R SPMV  N   V+              
Sbjct: 236 DTDPRLSVDDSRFSFDAPRASWDGYLIGKTCSRFSPMVAINDDRVLVEEEEDEEGEEEVV 295

Query: 279 XXXXXXXXXXHCPGGSAETMHYY 301
                     H PG SAET HYY
Sbjct: 296 ENLESSGGGLH-PGDSAETKHYY 317


>Medtr7g066730.1 | DUF740 family protein | HC |
           chr7:24313566-24310624 | 20130731
          Length = 746

 Score =  152 bits (383), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 114/208 (54%), Gaps = 22/208 (10%)

Query: 119 CVEDDEETKTMKEFIDLELKSKKSSGRDFREIAGSFWDAASVFSKRLMKRRRKQSLKRNL 178
            V  +E  K MKE +DL+ + KK+SGRD +EIAGSFW AASVFSK+L K R+KQ  K+  
Sbjct: 239 LVFTEESLKPMKEHMDLDSQPKKNSGRDLKEIAGSFWSAASVFSKKLQKWRQKQKAKKRG 298

Query: 179 AXXXXXXXXLTSVEVANQGGRNLRETQSEVGEYGFSLGRRSCDTDPRLSVD--------D 230
                     T + V    GR  RETQSE+ +YGF  GRRSCDTDPR S+D        D
Sbjct: 299 PRNGSVSGSSTLLPVEKPIGRQFRETQSEIADYGF--GRRSCDTDPRFSLDIARMSFDND 356

Query: 231 PRFSFEAPRASWDGYLIGKTYPRLSPMVPFNGVVDGMVXXXXXXXXX--------XXXXX 282
           PR+SF+ PRASWDGYLIGKT+PR+ P+     VV+                         
Sbjct: 357 PRYSFDEPRASWDGYLIGKTFPRV-PLPTMLSVVEDAPAVHVQRTDSLIPVEEPPVLNEN 415

Query: 283 XXXXXXHCPGGSAETMHYYSD---RRRR 307
                 + PG   +T  YYSD   RRR+
Sbjct: 416 GEEINVNFPGNQTQTKEYYSDSSTRRRK 443