Miyakogusa Predicted Gene

Lj0g3v0191689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0191689.1 tr|B9HUR3|B9HUR3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_884079 PE=4
SV=1,61.96,7e-19,Chlorophyllase,Chlorophyllase; no description,NULL;
alpha/beta-Hydrolases,NULL,CUFF.12137.1
         (110 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g041385.1 | chlorophyllase | HC | chr1:15444100-15442540 |...    99   1e-21
Medtr1g041390.1 | chlorophyllase enzyme | HC | chr1:15449689-154...    97   4e-21
Medtr6g082500.1 | chlorophyllase enzyme | HC | chr6:30840003-308...    70   5e-13

>Medtr1g041385.1 | chlorophyllase | HC | chr1:15444100-15442540 |
           20130731
          Length = 306

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 70/84 (83%), Gaps = 3/84 (3%)

Query: 20  STALTNVFDSGKYTTKFQRIESNSCNGTHPDPPPPKSLLIATPLEGGEFPVLLFLHGYLL 79
           S+ +TNVF++GKYTT+ Q + S S        PPP+SLLIATP+EGGEFP+LLFLH YLL
Sbjct: 2   SSFVTNVFETGKYTTQLQMVGSGSYTQY---VPPPRSLLIATPIEGGEFPLLLFLHAYLL 58

Query: 80  YNSFYSQLIQHIASHGFIVIAPQV 103
           YNSFYSQLIQH+ASHGFIVIAPQ+
Sbjct: 59  YNSFYSQLIQHVASHGFIVIAPQL 82


>Medtr1g041390.1 | chlorophyllase enzyme | HC |
           chr1:15449689-15448384 | 20130731
          Length = 306

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/83 (69%), Positives = 72/83 (86%), Gaps = 3/83 (3%)

Query: 21  TALTNVFDSGKYTTKFQRIESNSCNGTHPDPPPPKSLLIATPLEGGEFPVLLFLHGYLLY 80
           ++++NVF++G YTTK  R++S  C+    + PPPKSLLIATP+EGGEFP+LLFLHGYLL 
Sbjct: 3   SSVSNVFETGNYTTKLLRVDS--CSHAQ-NVPPPKSLLIATPIEGGEFPLLLFLHGYLLL 59

Query: 81  NSFYSQLIQHIASHGFIVIAPQV 103
           NSFYSQLIQH+ASHGFIVIAPQ+
Sbjct: 60  NSFYSQLIQHVASHGFIVIAPQL 82


>Medtr6g082500.1 | chlorophyllase enzyme | HC |
           chr6:30840003-30842369 | 20130731
          Length = 314

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 11/85 (12%)

Query: 19  ASTALTNVFDSGKYTTKFQRIESNSCNGTHPDPPPPKSLLIATPLEGGEFPVLLFLHGYL 78
           ++T  T+VF+SG    K   ++++           PK LL+ TP   G +PV+LF HG+ 
Sbjct: 10  STTIGTDVFESGNIKWKQFNVDTS-----------PKPLLVFTPTVEGTYPVILFYHGFA 58

Query: 79  LYNSFYSQLIQHIASHGFIVIAPQV 103
           ++NS+Y +L+ HI SHGFIV+APQ+
Sbjct: 59  IWNSYYHKLLGHITSHGFIVVAPQL 83