Miyakogusa Predicted Gene

Lj0g3v0191599.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0191599.1 Non Characterized Hit- tr|C5WVI2|C5WVI2_SORBI
Putative uncharacterized protein Sb01g031577
(Fragment,34.27,0.000000000000002,seg,NULL,CUFF.12124.1
         (366 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g017920.1 | hypothetical protein | HC | chr1:5113230-51118...   400   e-112

>Medtr1g017920.1 | hypothetical protein | HC | chr1:5113230-5111821
           | 20130731
          Length = 366

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/375 (62%), Positives = 257/375 (68%), Gaps = 32/375 (8%)

Query: 1   MIKTLSPYSNPAKTAEIMSRYRPIAPKPET-XXXXXXXXXXXXXXXXXXXXXXXPYLRNL 59
           MIKTL+PY NPAKTAEIMSRYRPIAPKPET                        PYLRNL
Sbjct: 1   MIKTLNPYPNPAKTAEIMSRYRPIAPKPETCSSNNSTSDGSSSSNSLSQKIKQSPYLRNL 60

Query: 60  WPQLQARPTRTRKRGRAPIALPSSLKRQKTTQILGFCPPCHVTSPVKNLSFQ-SFASPSQ 118
           WPQLQARPTRTRKRGRAPI+LPSSLKRQK T +LGFC P HVTSP+KNL+ Q +F  PS 
Sbjct: 61  WPQLQARPTRTRKRGRAPISLPSSLKRQK-THVLGFCQPLHVTSPIKNLTLQGNFVPPSS 119

Query: 119 LPQLPLTNHGIGVLNCTLEK-TNPGXXXX-----XXXXXXXXXXXKLELTNIEVIDL-NT 171
           LPQLPL NHG+GVLNC     TNP                     K EL   EVIDL NT
Sbjct: 120 LPQLPLPNHGVGVLNCNKNSTTNPNLVTLPLLPCSPNSPNNNNALKFEL---EVIDLNNT 176

Query: 172 KAEIPQERDLLQQLQKPASS------VIAPHPIRPIGSFISVGCISKDSTTMSNVALAQN 225
           K E+PQERDLLQQLQKPASS      VI+P PIRPIGS I+VGCIS+ S       + + 
Sbjct: 177 KVEVPQERDLLQQLQKPASSTNNVINVISPQPIRPIGSCINVGCISEVSAIP---CVTKT 233

Query: 226 PKKXXXXXXXXXXXXXXXXISDSKNRVRVANSAYKEMVGQPECPWLESMVQCASSSCKSK 285
           PKK                ISDS NRVR+ANSAYKEMVGQPECPWLE  +QC SS    K
Sbjct: 234 PKKPEELEQEVESEELPAVISDSNNRVRMANSAYKEMVGQPECPWLE--IQCGSS---CK 288

Query: 286 RISGEVTLHLCDSS-IPISSNGFSCWVRIEWQSE-QRKSCVSAFCDVVKLCCD-SRDYLF 342
           RISGEVTL L DSS IPISSNGFSCWVRIEW++  Q+K+CV+AFCDVVKLCCD SRDY+F
Sbjct: 289 RISGEVTLQLSDSSNIPISSNGFSCWVRIEWENNGQKKNCVNAFCDVVKLCCDQSRDYVF 348

Query: 343 TWRFHT--KEGSQSS 355
           TWRFHT  +E SQSS
Sbjct: 349 TWRFHTRSREASQSS 363