Miyakogusa Predicted Gene

Lj0g3v0191559.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0191559.1 tr|Q26C76|Q26C76_FLABB Ribosomal RNA large
subunit methyltransferase H OS=Flavobacteria bacterium
(s,42.71,1e-18,SPOUT_MTase,SPOUT methyltransferase, predicted; no
description,NULL; alpha/beta knot,NULL,CUFF.12125.1
         (96 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g010000.1 | SPOUT methyltransferase, putative | HC | chr1:...    65   1e-11

>Medtr1g010000.1 | SPOUT methyltransferase, putative | HC |
           chr1:1665925-1667788 | 20130731
          Length = 212

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 36/50 (72%)

Query: 1   MNIIRSDDWVVMLDERGQDIGSEQMAELVGGASNTGASRLSFCIGGPYGH 50
           MN+IRSDDWVVMLDERGQD+ SEQMAELV  A NT  +  S  I   + H
Sbjct: 123 MNLIRSDDWVVMLDERGQDLRSEQMAELVADAGNTQCTFKSQTIEASWVH 172