Miyakogusa Predicted Gene

Lj0g3v0190769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0190769.1 Non Characterized Hit- tr|F4JHF7|F4JHF7_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At4,51.52,3e-19,UNKNOWN PROTEIN,NULL; GAMMA TUBULIN COMPLEX
PROTEIN,Spc97/Spc98,CUFF.12086.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g011490.1 | Spc97/Spc98 family of spindle pole body (SBP) ...   193   3e-50
Medtr8g011490.2 | Spc97/Spc98 family of spindle pole body (SBP) ...   183   4e-47
Medtr8g011490.3 | Spc97/Spc98 family of spindle pole body (SBP) ...   183   4e-47

>Medtr8g011490.1 | Spc97/Spc98 family of spindle pole body (SBP)
           component, putative | HC | chr8:3119418-3115042 |
           20130731
          Length = 168

 Score =  193 bits (491), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/139 (70%), Positives = 115/139 (82%), Gaps = 5/139 (3%)

Query: 1   MVELDNSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIDCKELANKFDLKMLRVI 60
            +E D  +ETRV+DVAWLCSLSESEIDMLISLKLLII+RA+ I CK LANKFDLKMLR I
Sbjct: 14  FIEGDKITETRVQDVAWLCSLSESEIDMLISLKLLIIKRAEWIGCKNLANKFDLKMLRAI 73

Query: 61  AFVLMEHLKAEVKDSSLIPDVVKSTAFLEACNLLQCNNEVAASIDELSMNVGADIQTFLR 120
           A VLME+LKAEVKD+SL+PD+VKSTAFL+ CNLL CN+EV+A+I+ELS +VGADIQ  L+
Sbjct: 74  ALVLMENLKAEVKDASLVPDMVKSTAFLDVCNLLNCNSEVSATIEELSTSVGADIQPILQ 133

Query: 121 R-----PPTSKRKKQKVVS 134
                  P+ KRKKQKV  
Sbjct: 134 GSSLYCSPSPKRKKQKVAG 152


>Medtr8g011490.2 | Spc97/Spc98 family of spindle pole body (SBP)
           component, putative | HC | chr8:3119418-3115057 |
           20130731
          Length = 137

 Score =  183 bits (464), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 90/120 (75%), Positives = 106/120 (88%)

Query: 1   MVELDNSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIDCKELANKFDLKMLRVI 60
            +E D  +ETRV+DVAWLCSLSESEIDMLISLKLLII+RA+ I CK LANKFDLKMLR I
Sbjct: 14  FIEGDKITETRVQDVAWLCSLSESEIDMLISLKLLIIKRAEWIGCKNLANKFDLKMLRAI 73

Query: 61  AFVLMEHLKAEVKDSSLIPDVVKSTAFLEACNLLQCNNEVAASIDELSMNVGADIQTFLR 120
           A VLME+LKAEVKD+SL+PD+VKSTAFL+ CNLL CN+EV+A+I+ELS +VGADIQ  L+
Sbjct: 74  ALVLMENLKAEVKDASLVPDMVKSTAFLDVCNLLNCNSEVSATIEELSTSVGADIQPILQ 133


>Medtr8g011490.3 | Spc97/Spc98 family of spindle pole body (SBP)
           component, putative | HC | chr8:3119418-3115519 |
           20130731
          Length = 137

 Score =  183 bits (464), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 90/120 (75%), Positives = 106/120 (88%)

Query: 1   MVELDNSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIDCKELANKFDLKMLRVI 60
            +E D  +ETRV+DVAWLCSLSESEIDMLISLKLLII+RA+ I CK LANKFDLKMLR I
Sbjct: 14  FIEGDKITETRVQDVAWLCSLSESEIDMLISLKLLIIKRAEWIGCKNLANKFDLKMLRAI 73

Query: 61  AFVLMEHLKAEVKDSSLIPDVVKSTAFLEACNLLQCNNEVAASIDELSMNVGADIQTFLR 120
           A VLME+LKAEVKD+SL+PD+VKSTAFL+ CNLL CN+EV+A+I+ELS +VGADIQ  L+
Sbjct: 74  ALVLMENLKAEVKDASLVPDMVKSTAFLDVCNLLNCNSEVSATIEELSTSVGADIQPILQ 133