Miyakogusa Predicted Gene
- Lj0g3v0190229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0190229.1 tr|F6HAA6|F6HAA6_VITVI Ubiquitin
carboxyl-terminal hydrolase OS=Vitis vinifera GN=VIT_06s0009g00890
,81.63,4e-17,Cysteine proteinases,NULL; UCH,Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2; SUBFAMILY NOT,TC64823.path1.1
(52 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g087710.1 | ubiquitin carboxyl-terminal hydrolase | HC | c... 107 2e-24
Medtr7g106570.1 | ubiquitin carboxyl-terminal hydrolase | HC | c... 68 2e-12
Medtr7g088760.2 | ubiquitin carboxyl-terminal hydrolase-like pro... 57 5e-09
Medtr7g088760.1 | ubiquitin carboxyl-terminal hydrolase-like pro... 57 5e-09
Medtr1g077980.1 | ubiquitin carboxyl-terminal hydrolase-like pro... 56 7e-09
Medtr1g077980.2 | ubiquitin carboxyl-terminal hydrolase-like pro... 56 7e-09
Medtr4g111860.1 | ubiquitin carboxyl-terminal hydrolase | HC | c... 48 3e-06
Medtr6g022300.1 | ubiquitin carboxyl-terminal hydrolase-like pro... 48 3e-06
Medtr6g022310.1 | ubiquitin carboxyl-terminal hydrolase-like pro... 47 3e-06
Medtr8g471100.1 | ubiquitin carboxyl-terminal hydrolase | LC | c... 47 6e-06
Medtr8g067060.1 | ubiquitin carboxyl-terminal hydrolase | LC | c... 47 6e-06
>Medtr2g087710.1 | ubiquitin carboxyl-terminal hydrolase | HC |
chr2:36896258-36906346 | 20130731
Length = 894
Score = 107 bits (268), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/48 (97%), Positives = 47/48 (97%)
Query: 1 MGGGHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRRVFE 48
MGGGHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRRV E
Sbjct: 817 MGGGHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRRVSE 864
>Medtr7g106570.1 | ubiquitin carboxyl-terminal hydrolase | HC |
chr7:43382337-43390245 | 20130731
Length = 899
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 5 HYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRRV 46
HYTAFV +G D+WY+FDDSRV P +E IK+ AAYVLFY++V
Sbjct: 847 HYTAFVRYGHDKWYEFDDSRVAPADEETIKTPAAYVLFYKKV 888
>Medtr7g088760.2 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr7:34635406-34624173 | 20130731
Length = 929
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 1 MGGGHYTAFVHH-GGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRRV 46
MG GHYTA + ++WY+FDDS + IS++ + ++AAYVLFYRRV
Sbjct: 872 MGSGHYTAHIKLLDENRWYNFDDSHISLISEDDVNTAAAYVLFYRRV 918
>Medtr7g088760.1 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr7:34635406-34624173 | 20130731
Length = 912
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 1 MGGGHYTAFVHH-GGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRRV 46
MG GHYTA + ++WY+FDDS + IS++ + ++AAYVLFYRRV
Sbjct: 855 MGSGHYTAHIKLLDENRWYNFDDSHISLISEDDVNTAAAYVLFYRRV 901
>Medtr1g077980.1 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr1:34854787-34865759 | 20130731
Length = 922
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 5 HYTAFVHHGGD-QWYDFDDSRVYPISKEKIKSSAAYVLFYRRV 46
HYTA+ D +WY FDDS V P+S+ +IKSSAAYVLFY+RV
Sbjct: 869 HYTAYAKLIDDNKWYHFDDSHVSPVSEGEIKSSAAYVLFYQRV 911
>Medtr1g077980.2 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr1:34854807-34865759 | 20130731
Length = 922
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 5 HYTAFVHHGGD-QWYDFDDSRVYPISKEKIKSSAAYVLFYRRV 46
HYTA+ D +WY FDDS V P+S+ +IKSSAAYVLFY+RV
Sbjct: 869 HYTAYAKLIDDNKWYHFDDSHVSPVSEGEIKSSAAYVLFYQRV 911
>Medtr4g111860.1 | ubiquitin carboxyl-terminal hydrolase | HC |
chr4:46237212-46230938 | 20130731
Length = 443
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 4 GHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRR 45
GHY +V GDQWY D+ V +S+E + S AY+LFY R
Sbjct: 349 GHYICYVRCVGDQWYSMSDTVVTKVSEEAVMSKEAYLLFYLR 390
>Medtr6g022300.1 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr6:7772847-7774745 | 20130731
Length = 632
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 4 GHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRR 45
GHY FV D W+ DDS V +S+E + S AY+LFY R
Sbjct: 324 GHYFCFVRTAPDTWHKLDDSMVTKVSEETVLSQEAYILFYAR 365
>Medtr6g022310.1 | ubiquitin carboxyl-terminal hydrolase-like
protein | HC | chr6:7777502-7779490 | 20130731
Length = 662
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 4 GHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFYRR 45
GHY +FV D W+ DDS V +S+E + S AY+LFY R
Sbjct: 384 GHYFSFVRTAPDTWHKLDDSMVTMVSEETVLSQEAYILFYAR 425
>Medtr8g471100.1 | ubiquitin carboxyl-terminal hydrolase | LC |
chr8:28044025-28040669 | 20130731
Length = 572
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 4 GHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFY 43
GHY +FV D+WY DD +V +S+E++ + AY+LFY
Sbjct: 465 GHYFSFVRSAPDKWYLMDDDKVSSVSEEEVLNRKAYILFY 504
>Medtr8g067060.1 | ubiquitin carboxyl-terminal hydrolase | LC |
chr8:27986696-27983367 | 20130731
Length = 563
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 4 GHYTAFVHHGGDQWYDFDDSRVYPISKEKIKSSAAYVLFY 43
GHY +FV D+WY DD +V +S+E++ + AY+LFY
Sbjct: 456 GHYFSFVRSAPDKWYLMDDDKVSSVSEEEVLNRKAYILFY 495