Miyakogusa Predicted Gene

Lj0g3v0190219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0190219.1 Non Characterized Hit- tr|I3S155|I3S155_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,96.57,0,YABBY,YABBY protein; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,High mobility g,CUFF.12065.1
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g087740.1 | plant-specific transcription factor YABBY fami...   281   2e-76
Medtr4g050300.1 | plant-specific transcription factor YABBY fami...   218   2e-57
Medtr4g114730.1 | plant-specific transcription factor YABBY fami...   198   2e-51
Medtr4g025900.1 | plant-specific transcription factor YABBY fami...   169   9e-43
Medtr4g101660.1 | plant-specific transcription factor YABBY fami...   163   6e-41
Medtr5g034030.1 | YABBY transcription factor | HC | chr5:1470182...   152   2e-37
Medtr5g046230.1 | YABBY-like transcription factor CRABS CLAW-lik...   127   7e-30

>Medtr2g087740.1 | plant-specific transcription factor YABBY family
           protein | HC | chr2:36921389-36915323 | 20130731
          Length = 195

 Score =  281 bits (719), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/194 (77%), Positives = 160/194 (82%), Gaps = 20/194 (10%)

Query: 1   MSMDMMGT-ERVCYVHCNFCNTTLAVSVPCSSMLTVVTVRCGHCANLLSVNMGA-SLQTL 58
           M M+MM T ERVCYVHCNFCNTTLAVSVPCSS+LT+VTVRCGHCANLLSVNMGA SLQ+ 
Sbjct: 3   MDMNMMATNERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGATSLQSF 62

Query: 59  PPQD--PQH------FQEPSRKEL--------GSSSRCKAFEPVSHEQPRNIPPIRPPEK 102
            PQ   PQ        QE SRKE+         SSS+CKAF+P+ HEQPR  PPIRPPEK
Sbjct: 63  TPQQDHPQKQQLINCHQEASRKEVVGSSSSSSSSSSKCKAFQPLVHEQPRT-PPIRPPEK 121

Query: 103 RQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLD 162
           RQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLD
Sbjct: 122 RQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLD 181

Query: 163 QQ-GDATQKSNGLY 175
              G+ATQKSNG Y
Sbjct: 182 HGVGEATQKSNGFY 195


>Medtr4g050300.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:17796569-17804302 | 20130731
          Length = 179

 Score =  218 bits (556), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 117/187 (62%), Positives = 130/187 (69%), Gaps = 20/187 (10%)

Query: 1   MSMDMMGTERVCYVHCNFCNTTLAVSVPCSSMLTVVTVRCGHCANLLSVNMGASLQTLPP 60
           MSMDM+ TERVCYVHCNFCNT LAV+VP SS+LT+VTVRCGHCANLLSVNM A L    P
Sbjct: 1   MSMDMIATERVCYVHCNFCNTILAVNVPYSSLLTIVTVRCGHCANLLSVNMVAPLLQPFP 60

Query: 61  Q------------DPQHFQEPSRKELGSSSRCKAFEPVSHEQPRNIPPIRPPEKRQRVPS 108
                        D +   +         ++  +FE V H  PR IPPIRP EKR RVPS
Sbjct: 61  PPQLPQPQKQHIIDEEASSKEIGSSSSKCNKIASFEAVEH--PR-IPPIRPIEKRHRVPS 117

Query: 109 AYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLDQQGDAT 168
           AYNRFIKEEIQRIKASNPDISHREAFS+AAKNWAHFPHIHF     G +QAKLD      
Sbjct: 118 AYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHF-----GKQQAKLDHGEGTR 172

Query: 169 QKSNGLY 175
           +K+NG Y
Sbjct: 173 EKTNGFY 179


>Medtr4g114730.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:47236664-47232867 | 20130731
          Length = 191

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/169 (58%), Positives = 118/169 (69%), Gaps = 10/169 (5%)

Query: 7   GTERVCYVHCNFCNTTLAVSVPCSSMLTVVTVRCGHCANLLSVNMGASLQTLPPQD---P 63
             E++CY+ CNFCN  LAVSVPCSS+  +VTVRCGHC NL SVNM A+ Q+L  QD   P
Sbjct: 12  AAEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQAP 71

Query: 64  QHFQEPS-RKELGSSSRCKA-----FEPVSHEQPRNIPPIRPPEKRQRVPSAYNRFIKEE 117
            H   P  R    S+ +C         P +H     +   RPPEKRQRVPSAYN+FIKEE
Sbjct: 72  SHCMNPEYRIRTSSTPKCNDRIAMRSAPTTHVTEERVVN-RPPEKRQRVPSAYNQFIKEE 130

Query: 118 IQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGSKQAKLDQQGD 166
           IQRIKA+NPDISHREAFSTAAKNWAHFPHIHFGL L+ + QA+++   +
Sbjct: 131 IQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQAQIENVSE 179


>Medtr4g025900.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:8885604-8888552 | 20130731
          Length = 221

 Score =  169 bits (429), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 100/187 (53%), Positives = 115/187 (61%), Gaps = 22/187 (11%)

Query: 11  VCYVHCNFCNTTLAVSVPCSSMLTVVTVRCGHCANLLSVNMGASLQTLPPQ--------D 62
           +CYVHCNFC+T LAVSVPC+S+   VTVRCGHC NLLSVNM A L   P Q        +
Sbjct: 25  LCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRALLLPAPNQLHLGHTYFN 84

Query: 63  PQHFQEPSRKELGSSSRCK-----------AFEPVSHEQ-PRNIPPIRPPEKRQRVPSAY 110
           PQ   E  R    ++                     HE+ P+  P  RPPEKRQRVPSAY
Sbjct: 85  PQTLMEEIRNAPSTNMMMNQLPNPNDLMMNTMRGGHHEEIPKPPPANRPPEKRQRVPSAY 144

Query: 111 NRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGS--KQAKLDQQGDAT 168
           NRFIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHFGL  D    K+A + Q  +  
Sbjct: 145 NRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQDSEDV 204

Query: 169 QKSNGLY 175
              +G +
Sbjct: 205 LMKDGFF 211


>Medtr4g101660.1 | plant-specific transcription factor YABBY family
           protein | HC | chr4:42026521-42023461 | 20130731
          Length = 218

 Score =  163 bits (413), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/202 (48%), Positives = 114/202 (56%), Gaps = 44/202 (21%)

Query: 8   TERVCYVHCNFCNTTLAVSVPCSSMLTVVTVRCGHCANLLSVNMGASLQTLPPQDPQHFQ 67
           +E++CYVHC  C+T LAVSVPC+S+   VTVRCGHC NLL VNM A L  LP        
Sbjct: 17  SEQLCYVHCTICDTILAVSVPCTSLFKTVTVRCGHCTNLLPVNMRALL--LP-------- 66

Query: 68  EPSRKELGSSSRCKAFEPVSHEQPR----------------NIPPIRP------------ 99
            P++  LG S        +  E P                 ++PP R             
Sbjct: 67  SPNQFHLGHSFFSPTHHNLLEEMPNPAPNFMMNHINAPNDFSMPPTRTVADELPRPPIIN 126

Query: 100 --PEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGS- 156
             PEKRQRVPSAYNRFIK+EIQRIK+ NPDI+HREAFS AAKNWAHFPHIHFGL  D + 
Sbjct: 127 RPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTM 186

Query: 157 -KQAKLDQQGD--ATQKSNGLY 175
            K     Q+GD     K  G Y
Sbjct: 187 KKTNVCQQEGDDQILMKDGGFY 208


>Medtr5g034030.1 | YABBY transcription factor | HC |
           chr5:14701820-14703695 | 20130731
          Length = 217

 Score =  152 bits (384), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/151 (53%), Positives = 98/151 (64%), Gaps = 14/151 (9%)

Query: 9   ERVCYVHCNFCNTTLAVSVPCSSMLTVVTVRCGHCANLLSVNMG----------ASLQTL 58
           E++CYV C FCNT L VSVPCSS+  VVTVRCGHC +LLSVNM           ASL  L
Sbjct: 12  EQICYVQCGFCNTILMVSVPCSSLTMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLTHL 71

Query: 59  PPQDPQHFQEPSRKELGSSSRCKAFEPVSHEQPRNIPPI----RPPEKRQRVPSAYNRFI 114
             ++     E + K L S++          E+   IP      +PPEKRQR PSAYNRFI
Sbjct: 72  EQKESSSPDEDANKTLNSNTSASMMTYSDCEEDDVIPISNVVNKPPEKRQRTPSAYNRFI 131

Query: 115 KEEIQRIKASNPDISHREAFSTAAKNWAHFP 145
           KEEI+R+KA NPD++H+EAFSTAAKNWA+ P
Sbjct: 132 KEEIKRLKAKNPDMAHKEAFSTAAKNWANCP 162


>Medtr5g046230.1 | YABBY-like transcription factor CRABS CLAW-like
           protein | HC | chr5:20267886-20271029 | 20130731
          Length = 216

 Score =  127 bits (318), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 72/157 (45%), Positives = 92/157 (58%), Gaps = 21/157 (13%)

Query: 1   MSMDMM--GTERVCYVHCNFCNTTLAVSVPCSSMLTVVTVRCGHCANLLSVNMGASLQTL 58
           ++MD++    + +CYV CNFCNT LAV +PC  +L  VTV+CGHC+NL      + L T 
Sbjct: 7   VTMDLVPPSDQHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNL------SFLTTR 60

Query: 59  PPQDPQHFQEPSRKELG--------SSSRCKAFEPVSHEQPRNIPP---IRPPEKRQRVP 107
           PP       + +    G         SS            PR  PP   ++PPEK+ R+P
Sbjct: 61  PPSSKNQTVDHTLSLQGIYSSKKGQPSSSSSPTTSTESLSPR--PPPFVVKPPEKKHRLP 118

Query: 108 SAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHF 144
           SAYNRF+KEEIQRIK +NP I HREAFS AAKNWA +
Sbjct: 119 SAYNRFMKEEIQRIKVANPQIPHREAFSAAAKNWARY 155