Miyakogusa Predicted Gene

Lj0g3v0190089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0190089.1 Non Characterized Hit- tr|I1JGQ7|I1JGQ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40037
PE,43.53,0.000000007, ,CUFF.12059.1
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g045840.1 | C2H2 type zf-met: zinc-finger protein | LC | c...    65   2e-11
Medtr4g130690.1 | C2H2 type zf-met: zinc-finger protein | LC | c...    64   5e-11
Medtr4g129690.1 | C2H2 type zf-met: zinc-finger protein | LC | c...    54   7e-08

>Medtr3g045840.1 | C2H2 type zf-met: zinc-finger protein | LC |
           chr3:15040153-15037599 | 20130731
          Length = 543

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 3/64 (4%)

Query: 91  NQDEVIPPAKPDTDLYDAKRKA---EAPAVNDSQICLIQKPKKEWACMLCRVTASDENSL 147
           N+D++I  AKPD  LY AKRKA   + P+   S I L +K K+EW+C LCR+ A+ EN L
Sbjct: 95  NKDKIILLAKPDMSLYSAKRKAVTQDVPSDEPSAIGLNKKLKEEWSCELCRINATSENGL 154

Query: 148 NVHL 151
           N HL
Sbjct: 155 NDHL 158


>Medtr4g130690.1 | C2H2 type zf-met: zinc-finger protein | LC |
           chr4:54456352-54460500 | 20130731
          Length = 486

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 87  PAEINQDEVIPPAKPDTDLYDAKRKA---EAPAVNDSQICLIQKPKKEWACMLCRVTASD 143
           P   ++D+VI  AKPD DLY AKRKA   +AP  +   I + +KPK+EW+C LC++ A+ 
Sbjct: 138 PQTSDKDKVILLAKPDPDLYGAKRKALTLDAPNDDPYAIGMKKKPKEEWSCELCQIKATS 197

Query: 144 ENSLNVHL 151
           E+ LN HL
Sbjct: 198 ESGLNAHL 205


>Medtr4g129690.1 | C2H2 type zf-met: zinc-finger protein | LC |
           chr4:54056214-54059208 | 20130731
          Length = 369

 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 91  NQDEVIPPAKPDTDLYDAKRKAEAP--AVND--SQICLIQKPKKEWACMLCRVTASDENS 146
           ++D+VI  AKPD  L  AKRKA      ++D  S I   +K KKEW+C LC++ AS EN 
Sbjct: 103 DKDKVILLAKPDLGLDSAKRKAVTHDIVLDDEPSAIGSNKKLKKEWSCELCQIKASSENG 162

Query: 147 LNVHL 151
           LN HL
Sbjct: 163 LNDHL 167