Miyakogusa Predicted Gene

Lj0g3v0189609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0189609.1 Non Characterized Hit- tr|I1N1Q8|I1N1Q8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,87.36,0,no
description,Ribonuclease II/R; RNB,Ribonuclease II/R; RIBONUCLEASE
II,NULL; RIBONUCLEASE,NULL,CUFF.12049.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g021750.1 | ribonuclease II | HC | chr4:7207202-7191578 | ...   620   e-178
Medtr4g021750.2 | ribonuclease II | HC | chr4:7203751-7191578 | ...   619   e-177
Medtr4g021750.3 | ribonuclease II | HC | chr4:7207197-7191693 | ...   619   e-177

>Medtr4g021750.1 | ribonuclease II | HC | chr4:7207202-7191578 |
           20130731
          Length = 787

 Score =  620 bits (1599), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 303/349 (86%), Positives = 332/349 (95%)

Query: 1   MRRGTSVFLPTATYSMFPEKLAMEAMSLRQGEICNAVTVSVVLHKDGSIAECSVLNSLIK 60
           MRRGTSVFLPTATYSMFPE LAM AMSLRQGE+CNAVTVSVVLH DGSIAECSV NS+IK
Sbjct: 439 MRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVVLHDDGSIAECSVFNSVIK 498

Query: 61  PTYMLTYESASELLHLNLKEEVELRILSEAATLRLNWRRQQGAVETASLETRIKVSNPED 120
           PTYMLTYESASELL+LNL+EEVELRILSEAA LRLNWRRQQGAVETA+LE RIKVSNPED
Sbjct: 499 PTYMLTYESASELLNLNLEEEVELRILSEAANLRLNWRRQQGAVETATLEARIKVSNPED 558

Query: 121 AEPSINLYVESQADPAMRLVSEMMILCGEAMATFGSRNEIPLPYRGQPQSDINLSEFSHL 180
            EPSINLYVE+QADPAMRLVSEMMILCGEA+ATFGSRN IPLPYRGQPQSDINLSEFSHL
Sbjct: 559 PEPSINLYVENQADPAMRLVSEMMILCGEAIATFGSRNNIPLPYRGQPQSDINLSEFSHL 618

Query: 181 PEGPVRSLALVKVMRAAEIDFRKPARHGVLGLPGYVQFTSPIRRYLDLLAHYQVKAFLRG 240
           PEGPVRS ALVK+MRAAEIDFRKPARHGVLG+PGYVQFTSPIRRYLDLLAHYQ+KAFLRG
Sbjct: 619 PEGPVRSFALVKIMRAAEIDFRKPARHGVLGIPGYVQFTSPIRRYLDLLAHYQIKAFLRG 678

Query: 241 EPLPFSPGKLEGIAAVVNDRFRTVRKLCNSSLRYWILEYLRRQPKEKKYRALVLRFLKDR 300
           EP PF+ G LEG+A+ VN++ R VRKL NSSLRYWILEYLR+QPKE++YRALVL+FLKDR
Sbjct: 679 EPPPFTSGNLEGLASGVNEKVRAVRKLSNSSLRYWILEYLRKQPKERRYRALVLKFLKDR 738

Query: 301 IAALLLVEVGFQASAWVSLGAQIGDEVMVKVEEAHPRDDVIFLKEVVKG 349
           IAALLLVEVGFQA+AWVS+G+QIGDEV+VKVE++HPRDD+I++KEV +G
Sbjct: 739 IAALLLVEVGFQATAWVSVGSQIGDEVVVKVEQSHPRDDIIYVKEVARG 787


>Medtr4g021750.2 | ribonuclease II | HC | chr4:7203751-7191578 |
           20130731
          Length = 555

 Score =  619 bits (1596), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 303/349 (86%), Positives = 332/349 (95%)

Query: 1   MRRGTSVFLPTATYSMFPEKLAMEAMSLRQGEICNAVTVSVVLHKDGSIAECSVLNSLIK 60
           MRRGTSVFLPTATYSMFPE LAM AMSLRQGE+CNAVTVSVVLH DGSIAECSV NS+IK
Sbjct: 207 MRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVVLHDDGSIAECSVFNSVIK 266

Query: 61  PTYMLTYESASELLHLNLKEEVELRILSEAATLRLNWRRQQGAVETASLETRIKVSNPED 120
           PTYMLTYESASELL+LNL+EEVELRILSEAA LRLNWRRQQGAVETA+LE RIKVSNPED
Sbjct: 267 PTYMLTYESASELLNLNLEEEVELRILSEAANLRLNWRRQQGAVETATLEARIKVSNPED 326

Query: 121 AEPSINLYVESQADPAMRLVSEMMILCGEAMATFGSRNEIPLPYRGQPQSDINLSEFSHL 180
            EPSINLYVE+QADPAMRLVSEMMILCGEA+ATFGSRN IPLPYRGQPQSDINLSEFSHL
Sbjct: 327 PEPSINLYVENQADPAMRLVSEMMILCGEAIATFGSRNNIPLPYRGQPQSDINLSEFSHL 386

Query: 181 PEGPVRSLALVKVMRAAEIDFRKPARHGVLGLPGYVQFTSPIRRYLDLLAHYQVKAFLRG 240
           PEGPVRS ALVK+MRAAEIDFRKPARHGVLG+PGYVQFTSPIRRYLDLLAHYQ+KAFLRG
Sbjct: 387 PEGPVRSFALVKIMRAAEIDFRKPARHGVLGIPGYVQFTSPIRRYLDLLAHYQIKAFLRG 446

Query: 241 EPLPFSPGKLEGIAAVVNDRFRTVRKLCNSSLRYWILEYLRRQPKEKKYRALVLRFLKDR 300
           EP PF+ G LEG+A+ VN++ R VRKL NSSLRYWILEYLR+QPKE++YRALVL+FLKDR
Sbjct: 447 EPPPFTSGNLEGLASGVNEKVRAVRKLSNSSLRYWILEYLRKQPKERRYRALVLKFLKDR 506

Query: 301 IAALLLVEVGFQASAWVSLGAQIGDEVMVKVEEAHPRDDVIFLKEVVKG 349
           IAALLLVEVGFQA+AWVS+G+QIGDEV+VKVE++HPRDD+I++KEV +G
Sbjct: 507 IAALLLVEVGFQATAWVSVGSQIGDEVVVKVEQSHPRDDIIYVKEVARG 555


>Medtr4g021750.3 | ribonuclease II | HC | chr4:7207197-7191693 |
           20130731
          Length = 614

 Score =  619 bits (1595), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 303/349 (86%), Positives = 332/349 (95%)

Query: 1   MRRGTSVFLPTATYSMFPEKLAMEAMSLRQGEICNAVTVSVVLHKDGSIAECSVLNSLIK 60
           MRRGTSVFLPTATYSMFPE LAM AMSLRQGE+CNAVTVSVVLH DGSIAECSV NS+IK
Sbjct: 266 MRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVVLHDDGSIAECSVFNSVIK 325

Query: 61  PTYMLTYESASELLHLNLKEEVELRILSEAATLRLNWRRQQGAVETASLETRIKVSNPED 120
           PTYMLTYESASELL+LNL+EEVELRILSEAA LRLNWRRQQGAVETA+LE RIKVSNPED
Sbjct: 326 PTYMLTYESASELLNLNLEEEVELRILSEAANLRLNWRRQQGAVETATLEARIKVSNPED 385

Query: 121 AEPSINLYVESQADPAMRLVSEMMILCGEAMATFGSRNEIPLPYRGQPQSDINLSEFSHL 180
            EPSINLYVE+QADPAMRLVSEMMILCGEA+ATFGSRN IPLPYRGQPQSDINLSEFSHL
Sbjct: 386 PEPSINLYVENQADPAMRLVSEMMILCGEAIATFGSRNNIPLPYRGQPQSDINLSEFSHL 445

Query: 181 PEGPVRSLALVKVMRAAEIDFRKPARHGVLGLPGYVQFTSPIRRYLDLLAHYQVKAFLRG 240
           PEGPVRS ALVK+MRAAEIDFRKPARHGVLG+PGYVQFTSPIRRYLDLLAHYQ+KAFLRG
Sbjct: 446 PEGPVRSFALVKIMRAAEIDFRKPARHGVLGIPGYVQFTSPIRRYLDLLAHYQIKAFLRG 505

Query: 241 EPLPFSPGKLEGIAAVVNDRFRTVRKLCNSSLRYWILEYLRRQPKEKKYRALVLRFLKDR 300
           EP PF+ G LEG+A+ VN++ R VRKL NSSLRYWILEYLR+QPKE++YRALVL+FLKDR
Sbjct: 506 EPPPFTSGNLEGLASGVNEKVRAVRKLSNSSLRYWILEYLRKQPKERRYRALVLKFLKDR 565

Query: 301 IAALLLVEVGFQASAWVSLGAQIGDEVMVKVEEAHPRDDVIFLKEVVKG 349
           IAALLLVEVGFQA+AWVS+G+QIGDEV+VKVE++HPRDD+I++KEV +G
Sbjct: 566 IAALLLVEVGFQATAWVSVGSQIGDEVVVKVEQSHPRDDIIYVKEVARG 614