Miyakogusa Predicted Gene

Lj0g3v0189459.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0189459.1 Non Characterized Hit- tr|I1K1T0|I1K1T0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.07,0,SUBFAMILY NOT
NAMED,NULL; AUTOPHAGY PROTEIN 16-LIKE,NULL; seg,NULL,gene.g14698.t1.1
         (476 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g079820.1 | transducin/WD40 repeat protein | HC | chr8:342...   719   0.0  
Medtr5g017800.1 | transducin/WD40 repeat protein | HC | chr5:657...   629   e-180

>Medtr8g079820.1 | transducin/WD40 repeat protein | HC |
            chr8:34235279-34253775 | 20130731
          Length = 1616

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/478 (78%), Positives = 394/478 (82%), Gaps = 3/478 (0%)

Query: 1    MYGAADGSSSDEEGVSK-KKIHIKIRD-PISSSTVDVNKIKEATRQLKLGEGLPPPTRTR 58
            MYGAADGSSSDEEG SK K+IHIKIRD PISSSTVDVNKIKEAT+Q KLGEGLPPP RTR
Sbjct: 1140 MYGAADGSSSDEEGASKIKRIHIKIRDKPISSSTVDVNKIKEATKQFKLGEGLPPPMRTR 1199

Query: 59   SSISGNQDLGQILSLXXXXXXXXXXXXXXXXDPFGTDAFTQPDSTSQPTIGVVSGGAKAG 118
            S+ SG+QDLGQILSL                D FGTDA TQP+  SQPT G V GG   G
Sbjct: 1200 SN-SGSQDLGQILSLPPVTTGIPTATVSTPVDLFGTDASTQPEMISQPTTGAVGGGVAIG 1258

Query: 119  PIPEDFFQHTVSSLQVAASLPPAGTFLSRFTPGGPISNTTPNQVSVSEADVGFXXXXXXX 178
            PIPEDFFQ+T+SS+ VAASLPPAGTFLS+FTPG   SNTTPNQ S +EA  G        
Sbjct: 1259 PIPEDFFQNTISSVHVAASLPPAGTFLSKFTPGIQTSNTTPNQASATEAGFGLQGGVSNQ 1318

Query: 179  XXXXXXXXXESIGLPDGGVPPQSSAQAVVMPXXXXXXXXXXXXXXPLDLSVLGVPNSADS 238
                     ESIGLPDGGVPPQS  QAVV P              PLDLSVLGVPNSADS
Sbjct: 1319 AIQQPVVPMESIGLPDGGVPPQSMPQAVVTPQPQLQPAQPQISSQPLDLSVLGVPNSADS 1378

Query: 239  GKPSQSSSAPVSVHPGQVPRGAAASVCFKIGLAHLELNNLSDALSCFDEAFLALAKEQSR 298
            GK  QS SAPVSVHPGQVPRGA ASVCFK GLAHLELN+LSDALSCFDE+FLALAKEQSR
Sbjct: 1379 GKLPQSGSAPVSVHPGQVPRGAPASVCFKTGLAHLELNHLSDALSCFDESFLALAKEQSR 1438

Query: 299  GSDIKAQATICAQYKLAVTLLREIGRLQKVHGPSAISAKDEMARLSRHLGSLPLLAKHRI 358
            GSDIKAQATICAQYK+AVTLLREIGRLQ+VHGPSAISAKDEMARLSRHLGSLPLLAKHRI
Sbjct: 1439 GSDIKAQATICAQYKIAVTLLREIGRLQRVHGPSAISAKDEMARLSRHLGSLPLLAKHRI 1498

Query: 359  NCIRTAIKRNMEVQNYAYSKQMLELLFTKAPPSKQEEFRTLIDLCVQRGLTNKSIDPLED 418
            NCIRTAIKRNMEVQNYAYSKQMLELL +KAP +KQEEFR+L+DLCVQRGLTNKSIDPLED
Sbjct: 1499 NCIRTAIKRNMEVQNYAYSKQMLELLLSKAPSNKQEEFRSLVDLCVQRGLTNKSIDPLED 1558

Query: 419  PSQFCSATLSRLSTIGYDVCDLCGAKFSAVTAPGCIVCGMGSIKRSDAVAGPVSSPFG 476
            PSQFCSATLSRLSTIGYDVCDLCGAKFSAVTAPGCIVCGMGSIKRSDA+A  V SPFG
Sbjct: 1559 PSQFCSATLSRLSTIGYDVCDLCGAKFSAVTAPGCIVCGMGSIKRSDAIAASVPSPFG 1616


>Medtr5g017800.1 | transducin/WD40 repeat protein | HC |
           chr5:6575427-6569090 | 20130731
          Length = 889

 Score =  629 bits (1622), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 335/481 (69%), Positives = 369/481 (76%), Gaps = 23/481 (4%)

Query: 1   MYGAA-DGSSSDEEGVSK-KKIHIKIRDPISSSTVDVNKIKEATRQLKLGEGLPPPTRTR 58
           MYGAA DGSSSDEEGVSK KKIH++IRD    S+VDVNKIKEA  + KL  GL P +R+R
Sbjct: 427 MYGAAGDGSSSDEEGVSKIKKIHVRIRDKPIDSSVDVNKIKEAASKFKLAGGLTP-SRSR 485

Query: 59  SSISGNQDLGQILSLXXXXXXXXXXXXXXXXDPFGTDAFTQPDSTSQPTIGVVSGGAKAG 118
           S  SG QD GQ L+L                D FGT+  T+P+S+SQP    ++G    G
Sbjct: 486 SLTSGPQDFGQFLALPPVTTGMAARTVSTPGDVFGTETLTRPESSSQP----ITGAVGRG 541

Query: 119 PIPEDFFQHTVSSLQVAASLPPAGTFLSRFTPGGPISNTTPNQVSVSEADVGFXXXXXXX 178
           PIPEDFFQ+TVSSLQVAA+L PAG++LS+ TPG   S  T NQ + SEADVG        
Sbjct: 542 PIPEDFFQNTVSSLQVAATLRPAGSYLSKLTPGVESSKETANQFNTSEADVG------DV 595

Query: 179 XXXXXXXXXESIGLPDGGVPPQSSAQAVVMPXXXXXXXXXXXXXXPLDLSVLGVPNSADS 238
                    E IGLPDGG+PPQSS QA  +P              PLDLS+LGVPNSAD 
Sbjct: 596 QPKSVVVSNEHIGLPDGGLPPQSSDQAAGIPPSQLQASTQ-----PLDLSILGVPNSAD- 649

Query: 239 GKPSQSSSAPVSVHPGQVPRGAAASVCFKIGLAHLELNNLSDALSCFDEAFLALAKEQSR 298
            KP+Q+ S+P SV PGQVP+GA ASVCFK GLAHLELNNLSDALSCFDEAFLALAKE SR
Sbjct: 650 -KPAQAGSSPSSVRPGQVPQGAEASVCFKTGLAHLELNNLSDALSCFDEAFLALAKEVSR 708

Query: 299 GSDIKAQATICAQYKLAVTLLREIGRLQKVHGPSAISAKDEMARLSRHLGSLPLLAKHRI 358
           GSDIKAQATICAQYK+ VTLL+EIGRLQKV G  AISAKDEMARLSRHLGSLPLLAKHRI
Sbjct: 709 GSDIKAQATICAQYKITVTLLQEIGRLQKVLGSRAISAKDEMARLSRHLGSLPLLAKHRI 768

Query: 359 NCIRTAIKRNMEVQNYAYSKQMLELLFTKAPPSKQEEFRTLIDLCVQRGLTNKSIDPLED 418
           NCIRTAIKRNMEVQNYAYSKQMLELL +KAPPSKQEEFR+L+DLCVQRGL NKSIDP ED
Sbjct: 769 NCIRTAIKRNMEVQNYAYSKQMLELLLSKAPPSKQEEFRSLMDLCVQRGLNNKSIDPQED 828

Query: 419 PSQFCSATLSRLSTIGYDVCDLCGAKFSAVTAPGCIVCGMGSIKRSDAVA---GPVSSPF 475
           PSQFC+ATLSRLSTIGYDVCDLCG+KFSAV APGC +CGMGSIKRSDA A   GPV SPF
Sbjct: 829 PSQFCAATLSRLSTIGYDVCDLCGSKFSAVNAPGCTICGMGSIKRSDAHAGSVGPVPSPF 888

Query: 476 G 476
           G
Sbjct: 889 G 889