Miyakogusa Predicted Gene

Lj0g3v0189389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0189389.1 Non Characterized Hit- tr|Q9ZRW4|Q9ZRW4_CICAR
Putative uncharacterized protein (Fragment) OS=Cicer
a,71.79,0.00000007, ,NODE_44033_length_122_cov_642.786865.path2.1
         (50 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g064040.1 | transmembrane protein, putative | HC | chr3:28...    58   2e-09

>Medtr3g064040.1 | transmembrane protein, putative | HC |
           chr3:28794619-28795716 | 20130731
          Length = 191

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/40 (72%), Positives = 34/40 (85%), Gaps = 2/40 (5%)

Query: 1   MYLVWSVFSARYDYRAAVYGDLSDDEEVDSPKKT-GYVKI 39
           MYLVWSVF+AR++ RAA YGD SDD E++SPKK  GYVKI
Sbjct: 135 MYLVWSVFTARHELRAAAYGDFSDD-EIESPKKMGGYVKI 173