Miyakogusa Predicted Gene

Lj0g3v0188989.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0188989.1 Non Characterized Hit- tr|I1ISY6|I1ISY6_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,40.31,3e-18,POZ
domain,BTB/POZ fold; BTB,BTB/POZ; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Broad-Complex,CUFF.12044.1
         (172 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC | chr8:105286...   197   4e-51
Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC | chr8:105286...   182   2e-46
Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC | chr8:105286...   182   2e-46
Medtr4g088460.1 | BTB/POZ domain protein | LC | chr4:35082007-35...   139   2e-33

>Medtr8g028190.1 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524289 | 20130731
          Length = 551

 Score =  197 bits (501), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/234 (52%), Positives = 136/234 (58%), Gaps = 67/234 (28%)

Query: 5   SCESSFSFAFNDTRFSDKLLRIEIMNDPI-------------------KRRR-------- 37
           S ++ F FAFND+ FSD++LRIEIM DP+                   KRRR        
Sbjct: 25  SSDADFGFAFNDSNFSDRVLRIEIMADPVDPQPDSENCTSIADWARHRKRRREDIKKENV 84

Query: 38  ---------------------CEN--------------GDEAANNNDSI-WTMDYSGATV 61
                                 EN              GDEA N+ND     MDYS   V
Sbjct: 85  GDLPDEQILNGNQPDMDDCVASENQEEEVVAMVEESPSGDEAVNDNDEPNLGMDYSEPAV 144

Query: 62  VRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITLRINASEEAGLMELLKFMYSNTL 121
           VRVKTLHISS ILAAKSPFFYKLFSNGM ESE R +TLRINASEEA LMELL FMYSNTL
Sbjct: 145 VRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTLRINASEEAALMELLNFMYSNTL 204

Query: 122 NISATPALLDVLMAADKFDVPSCMKY----LLNPPMTLDSALLYLELPYTVVAA 171
           +I   P LLDVLMAADKF+V SCM+Y    L N  MT +SALLYLELP +V+ A
Sbjct: 205 SIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTPESALLYLELPSSVLMA 258


>Medtr8g028190.3 | BTB/POZ domain protein POB1 | HC |
           chr8:10528673-10524338 | 20130731
          Length = 559

 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/136 (72%), Positives = 106/136 (77%), Gaps = 5/136 (3%)

Query: 41  GDEAANNNDSI-WTMDYSGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITL 99
           GDEA N+ND     MDYS   VVRVKTLHISS ILAAKSPFFYKLFSNGM ESE R +TL
Sbjct: 131 GDEAVNDNDEPNLGMDYSEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTL 190

Query: 100 RINASEEAGLMELLKFMYSNTLNISATPALLDVLMAADKFDVPSCMKY----LLNPPMTL 155
           RINASEEA LMELL FMYSNTL+I   P LLDVLMAADKF+V SCM+Y    L N  MT 
Sbjct: 191 RINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTP 250

Query: 156 DSALLYLELPYTVVAA 171
           +SALLYLELP +V+ A
Sbjct: 251 ESALLYLELPSSVLMA 266


>Medtr8g028190.2 | BTB/POZ domain protein POB1 | HC |
           chr8:10528628-10524338 | 20130731
          Length = 591

 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/136 (72%), Positives = 106/136 (77%), Gaps = 5/136 (3%)

Query: 41  GDEAANNNDSI-WTMDYSGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITL 99
           GDEA N+ND     MDYS   VVRVKTLHISS ILAAKSPFFYKLFSNGM ESE R +TL
Sbjct: 163 GDEAVNDNDEPNLGMDYSEPAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESELRHVTL 222

Query: 100 RINASEEAGLMELLKFMYSNTLNISATPALLDVLMAADKFDVPSCMKY----LLNPPMTL 155
           RINASEEA LMELL FMYSNTL+I   P LLDVLMAADKF+V SCM+Y    L N  MT 
Sbjct: 223 RINASEEAALMELLNFMYSNTLSIKTAPGLLDVLMAADKFEVASCMRYCSRLLRNMQMTP 282

Query: 156 DSALLYLELPYTVVAA 171
           +SALLYLELP +V+ A
Sbjct: 283 ESALLYLELPSSVLMA 298


>Medtr4g088460.1 | BTB/POZ domain protein | LC |
           chr4:35082007-35083494 | 20130731
          Length = 362

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/170 (48%), Positives = 110/170 (64%), Gaps = 14/170 (8%)

Query: 4   DSCESSFSFAFNDTRFSDKLLRIEIMNDPIKRRRCENGDEAANNNDSIWTMDYSGATVVR 63
           D        AF+   F  + L I+IM         ENG EAAN +D+   MD S A  V+
Sbjct: 10  DGASEDVGSAFDYNIFLGRTLHIDIMG--------ENGGEAANADDANLQMDSSIA--VK 59

Query: 64  VKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITLRINASEEAGLMELLKFMYSNTLNI 123
           V T+ ISS ILAAKSP F+KLFSNGM ES+Q  +TLRI ASEEA ++ LLKFM +N LN+
Sbjct: 60  VITMQISSAILAAKSPLFFKLFSNGMRESDQTHVTLRITASEEAPVIALLKFMNTNILNV 119

Query: 124 SATPALLDVLMAADKFDVPSCMKY----LLNPPMTLDSALLYLELPYTVV 169
           ++    L+VL+AADKF+V SC+++    LL+  MTL+  L YL+LP +V+
Sbjct: 120 TSPLVFLEVLVAADKFEVASCLRHCNQLLLSISMTLEFVLPYLDLPSSVL 169