Miyakogusa Predicted Gene

Lj0g3v0188299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0188299.1 Non Characterized Hit- tr|K4AEL9|K4AEL9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si037326,50,3e-19,SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN,SSXT;
SSXT,SSXT; seg,NULL,CUFF.12013.1
         (189 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g024650.3 | GRF1-interacting factor-like protein | HC | ch...   164   7e-41
Medtr8g024650.1 | GRF1-interacting factor-like protein | HC | ch...   164   7e-41
Medtr8g024650.2 | GRF1-interacting factor-like protein | HC | ch...   164   7e-41
Medtr1g080590.1 | GRF1-interacting factor-like protein | HC | ch...    82   2e-16
Medtr7g115410.1 | SSXT protein (amine-terminal region) protein |...    70   8e-13
Medtr3g092260.1 | SSXT protein (amine-terminal region) protein |...    60   1e-09
Medtr8g072930.1 | SSXT protein (amine-terminal region) protein |...    53   2e-07

>Medtr8g024650.3 | GRF1-interacting factor-like protein | HC |
           chr8:9109643-9113372 | 20130731
          Length = 213

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 96/148 (64%), Gaps = 12/148 (8%)

Query: 13  SFPSQ-NITTEQIQKFLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADSX 71
           SFP Q NITTEQIQK+LDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIAD+ 
Sbjct: 13  SFPQQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQ 72

Query: 72  XXXXXXXXXXXXXXXXXXGFYMQHPXXXXXXXXXGMFPQKMPMQFGNPHXXXXXXXXXX- 130
                             GFYMQHP         GMFPQKMPMQFGNPH           
Sbjct: 73  PQTPALPPQMAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFGNPHQMQDQQHQQQQ 132

Query: 131 ----------XLGLRPGGMNNGMHPMHS 148
                      +GLRPGG+NNGMHPMH+
Sbjct: 133 QQLHQQAMQGQMGLRPGGINNGMHPMHN 160


>Medtr8g024650.1 | GRF1-interacting factor-like protein | HC |
           chr8:9109643-9113372 | 20130731
          Length = 213

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 96/148 (64%), Gaps = 12/148 (8%)

Query: 13  SFPSQ-NITTEQIQKFLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADSX 71
           SFP Q NITTEQIQK+LDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIAD+ 
Sbjct: 13  SFPQQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQ 72

Query: 72  XXXXXXXXXXXXXXXXXXGFYMQHPXXXXXXXXXGMFPQKMPMQFGNPHXXXXXXXXXX- 130
                             GFYMQHP         GMFPQKMPMQFGNPH           
Sbjct: 73  PQTPALPPQMAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFGNPHQMQDQQHQQQQ 132

Query: 131 ----------XLGLRPGGMNNGMHPMHS 148
                      +GLRPGG+NNGMHPMH+
Sbjct: 133 QQLHQQAMQGQMGLRPGGINNGMHPMHN 160


>Medtr8g024650.2 | GRF1-interacting factor-like protein | HC |
           chr8:9109643-9113372 | 20130731
          Length = 213

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 96/148 (64%), Gaps = 12/148 (8%)

Query: 13  SFPSQ-NITTEQIQKFLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADSX 71
           SFP Q NITTEQIQK+LDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIAD+ 
Sbjct: 13  SFPQQTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQ 72

Query: 72  XXXXXXXXXXXXXXXXXXGFYMQHPXXXXXXXXXGMFPQKMPMQFGNPHXXXXXXXXXX- 130
                             GFYMQHP         GMFPQKMPMQFGNPH           
Sbjct: 73  PQTPALPPQMAPHPAMQQGFYMQHPQAAAMAQQQGMFPQKMPMQFGNPHQMQDQQHQQQQ 132

Query: 131 ----------XLGLRPGGMNNGMHPMHS 148
                      +GLRPGG+NNGMHPMH+
Sbjct: 133 QQLHQQAMQGQMGLRPGGINNGMHPMHN 160


>Medtr1g080590.1 | GRF1-interacting factor-like protein | HC |
          chr1:35838257-35836013 | 20130731
          Length = 211

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 47/53 (88%)

Query: 18 NITTEQIQKFLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADS 70
          N+TT+ IQ++LDENK LIL I+++QN GKL ECA+ Q++LQ+NLMYLAAIADS
Sbjct: 19 NVTTDHIQQYLDENKSLILKIVESQNTGKLTECAENQSRLQRNLMYLAAIADS 71


>Medtr7g115410.1 | SSXT protein (amine-terminal region) protein |
          HC | chr7:47687065-47688259 | 20130731
          Length = 218

 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 46/58 (79%)

Query: 13 SFPSQNITTEQIQKFLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADS 70
          S  S N+     +++LDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLAAIADS
Sbjct: 4  SCHSSNLLLILHKQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 61


>Medtr3g092260.1 | SSXT protein (amine-terminal region) protein |
          HC | chr3:42152282-42149249 | 20130731
          Length = 189

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 39/51 (76%)

Query: 19 ITTEQIQKFLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIAD 69
          +TTEQIQK L+EN++LI+ IL+ Q  GK +E   YQA+LQ NL +LA +AD
Sbjct: 11 LTTEQIQKCLEENEELIMKILEGQKQGKHSELGPYQAKLQHNLTFLAKLAD 61


>Medtr8g072930.1 | SSXT protein (amine-terminal region) protein |
          LC | chr8:30835498-30835818 | 20130731
          Length = 106

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 35/45 (77%)

Query: 19 ITTEQIQKFLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMY 63
          +TTEQIQK L+EN++LI+AIL+ Q  GK  E A YQA+LQ NL +
Sbjct: 11 LTTEQIQKCLEENEELIMAILEGQKQGKHGELAPYQAKLQHNLTF 55