Miyakogusa Predicted Gene

Lj0g3v0188239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0188239.1 Non Characterized Hit- tr|D3BB10|D3BB10_POLPA
Putative uncharacterized protein OS=Polysphondylium pa,39.75,6e-18,no
description,NULL; SUBFAMILY NOT NAMED,NULL; CARBON CATABOLITE
REPRESSOR PROTEIN 4,NULL; DNase I-l,CUFF.12021.1
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g023830.1 | endonuclease/exonuclease/phosphatase family pr...   313   6e-86
Medtr8g023830.3 | endonuclease/exonuclease/phosphatase family pr...   313   1e-85
Medtr8g023830.2 | endonuclease/exonuclease/phosphatase family pr...   312   1e-85
Medtr3g093070.2 | endonuclease/exonuclease/phosphatase family pr...   247   5e-66
Medtr3g093070.1 | endonuclease/exonuclease/phosphatase family pr...   246   8e-66
Medtr5g068820.3 | endonuclease/exonuclease/phosphatase family pr...   239   1e-63
Medtr5g068820.1 | endonuclease/exonuclease/phosphatase family pr...   239   2e-63
Medtr5g068820.2 | endonuclease/exonuclease/phosphatase family pr...   167   8e-42

>Medtr8g023830.1 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr8:8682819-8687402 | 20130731
          Length = 466

 Score =  313 bits (803), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 173/221 (78%), Positives = 187/221 (84%), Gaps = 18/221 (8%)

Query: 1   MVVAAGSK--LRRGN---CSSHSVVINDYNNSDGEISRVK-KSGSFSALGEVNRDHSCVS 54
           MVVAAGSK  LRRGN   CSS++VVIN+      E+SR+  KS  FS      +D SCVS
Sbjct: 1   MVVAAGSKFSLRRGNSGSCSSNNVVINE------ELSRINNKSACFS------QDPSCVS 48

Query: 55  FTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQRILDGLLAESSSIMCLQEFWVGNEE 114
           FTTFNILAPIYKRIDPQNQGLRESD RS WLARNQRILD LL+ESSSIMCLQEFWVGNEE
Sbjct: 49  FTTFNILAPIYKRIDPQNQGLRESDFRSRWLARNQRILDSLLSESSSIMCLQEFWVGNEE 108

Query: 115 LVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYRELLFNDFGDRVAQLLH 174
           LV M+EERLG+AGY LFKLARTNNRGDGLLTAIHKEYLS+VNY+ELLFND GDRVAQLLH
Sbjct: 109 LVQMFEERLGDAGYQLFKLARTNNRGDGLLTAIHKEYLSIVNYQELLFNDCGDRVAQLLH 168

Query: 175 VQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSIVRLQQ 215
           V+S  P+L NQK S+HQEFLIVNTHLLFPHDSSL IVRL Q
Sbjct: 169 VRSVNPILQNQKDSVHQEFLIVNTHLLFPHDSSLCIVRLDQ 209


>Medtr8g023830.3 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr8:8682819-8686106 | 20130731
          Length = 358

 Score =  313 bits (801), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 173/221 (78%), Positives = 187/221 (84%), Gaps = 18/221 (8%)

Query: 1   MVVAAGSK--LRRGN---CSSHSVVINDYNNSDGEISRVK-KSGSFSALGEVNRDHSCVS 54
           MVVAAGSK  LRRGN   CSS++VVIN+      E+SR+  KS  FS      +D SCVS
Sbjct: 1   MVVAAGSKFSLRRGNSGSCSSNNVVINE------ELSRINNKSACFS------QDPSCVS 48

Query: 55  FTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQRILDGLLAESSSIMCLQEFWVGNEE 114
           FTTFNILAPIYKRIDPQNQGLRESD RS WLARNQRILD LL+ESSSIMCLQEFWVGNEE
Sbjct: 49  FTTFNILAPIYKRIDPQNQGLRESDFRSRWLARNQRILDSLLSESSSIMCLQEFWVGNEE 108

Query: 115 LVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYRELLFNDFGDRVAQLLH 174
           LV M+EERLG+AGY LFKLARTNNRGDGLLTAIHKEYLS+VNY+ELLFND GDRVAQLLH
Sbjct: 109 LVQMFEERLGDAGYQLFKLARTNNRGDGLLTAIHKEYLSIVNYQELLFNDCGDRVAQLLH 168

Query: 175 VQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSIVRLQQ 215
           V+S  P+L NQK S+HQEFLIVNTHLLFPHDSSL IVRL Q
Sbjct: 169 VRSVNPILQNQKDSVHQEFLIVNTHLLFPHDSSLCIVRLDQ 209


>Medtr8g023830.2 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr8:8682819-8687402 | 20130731
          Length = 399

 Score =  312 bits (800), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 173/221 (78%), Positives = 187/221 (84%), Gaps = 18/221 (8%)

Query: 1   MVVAAGSK--LRRGN---CSSHSVVINDYNNSDGEISRVK-KSGSFSALGEVNRDHSCVS 54
           MVVAAGSK  LRRGN   CSS++VVIN+      E+SR+  KS  FS      +D SCVS
Sbjct: 1   MVVAAGSKFSLRRGNSGSCSSNNVVINE------ELSRINNKSACFS------QDPSCVS 48

Query: 55  FTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQRILDGLLAESSSIMCLQEFWVGNEE 114
           FTTFNILAPIYKRIDPQNQGLRESD RS WLARNQRILD LL+ESSSIMCLQEFWVGNEE
Sbjct: 49  FTTFNILAPIYKRIDPQNQGLRESDFRSRWLARNQRILDSLLSESSSIMCLQEFWVGNEE 108

Query: 115 LVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYRELLFNDFGDRVAQLLH 174
           LV M+EERLG+AGY LFKLARTNNRGDGLLTAIHKEYLS+VNY+ELLFND GDRVAQLLH
Sbjct: 109 LVQMFEERLGDAGYQLFKLARTNNRGDGLLTAIHKEYLSIVNYQELLFNDCGDRVAQLLH 168

Query: 175 VQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSIVRLQQ 215
           V+S  P+L NQK S+HQEFLIVNTHLLFPHDSSL IVRL Q
Sbjct: 169 VRSVNPILQNQKDSVHQEFLIVNTHLLFPHDSSLCIVRLDQ 209


>Medtr3g093070.2 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr3:42560293-42556834 | 20130731
          Length = 456

 Score =  247 bits (631), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 118/192 (61%), Positives = 145/192 (75%)

Query: 24  YNNSDGEISRVKKSGSFSALGEVNRDHSCVSFTTFNILAPIYKRIDPQNQGLRESDTRSF 83
           +  S G ISR+      S+L + N    C++ TTFNILAPIYKRI+ ++   RESD R++
Sbjct: 6   WAKSMGRISRIGSFAIASSLNDTNPPQPCITCTTFNILAPIYKRINDEDPTCRESDYRAY 65

Query: 84  WLARNQRILDGLLAESSSIMCLQEFWVGNEELVHMYEERLGNAGYHLFKLARTNNRGDGL 143
           WLARN RILD LL E SSI+CLQEFWVGNEELV++YE+RLG+AGY  FKL RTNNRGDGL
Sbjct: 66  WLARNHRILDWLLNEKSSIICLQEFWVGNEELVNLYEKRLGDAGYVSFKLGRTNNRGDGL 125

Query: 144 LTAIHKEYLSVVNYRELLFNDFGDRVAQLLHVQSAAPLLPNQKGSLHQEFLIVNTHLLFP 203
           L A+  EY ++ NY+EL FND GDRVAQLLHV+   P    + G + QE LIVNTHLLFP
Sbjct: 126 LIAVQTEYFNIFNYKELHFNDIGDRVAQLLHVELVFPFSKWRNGEIRQEILIVNTHLLFP 185

Query: 204 HDSSLSIVRLQQ 215
           HD++LS+VRL+Q
Sbjct: 186 HDATLSLVRLKQ 197


>Medtr3g093070.1 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr3:42560198-42557219 | 20130731
          Length = 443

 Score =  246 bits (629), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 117/187 (62%), Positives = 143/187 (76%)

Query: 29  GEISRVKKSGSFSALGEVNRDHSCVSFTTFNILAPIYKRIDPQNQGLRESDTRSFWLARN 88
           G ISR+      S+L + N    C++ TTFNILAPIYKRI+ ++   RESD R++WLARN
Sbjct: 2   GRISRIGSFAIASSLNDTNPPQPCITCTTFNILAPIYKRINDEDPTCRESDYRAYWLARN 61

Query: 89  QRILDGLLAESSSIMCLQEFWVGNEELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIH 148
            RILD LL E SSI+CLQEFWVGNEELV++YE+RLG+AGY  FKL RTNNRGDGLL A+ 
Sbjct: 62  HRILDWLLNEKSSIICLQEFWVGNEELVNLYEKRLGDAGYVSFKLGRTNNRGDGLLIAVQ 121

Query: 149 KEYLSVVNYRELLFNDFGDRVAQLLHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSL 208
            EY ++ NY+EL FND GDRVAQLLHV+   P    + G + QE LIVNTHLLFPHD++L
Sbjct: 122 TEYFNIFNYKELHFNDIGDRVAQLLHVELVFPFSKWRNGEIRQEILIVNTHLLFPHDATL 181

Query: 209 SIVRLQQ 215
           S+VRL+Q
Sbjct: 182 SLVRLKQ 188


>Medtr5g068820.3 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr5:29157764-29160368 | 20130731
          Length = 365

 Score =  239 bits (610), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 117/163 (71%), Positives = 133/163 (81%)

Query: 53  VSFTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQRILDGLLAESSSIMCLQEFWVGN 112
           +S TTFNILAPIYKR++ ++Q  RES+ R  WLARNQRILD LL E SSI+CLQEFWVGN
Sbjct: 22  ISCTTFNILAPIYKRLNQEDQSSRESEDRDCWLARNQRILDWLLFERSSIICLQEFWVGN 81

Query: 113 EELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYRELLFNDFGDRVAQL 172
           EELV+MYE+RLG+AGY  FKL RTNNRGDGLL A+ KEY +VVNY+EL FND GDRVAQL
Sbjct: 82  EELVNMYEKRLGDAGYIHFKLGRTNNRGDGLLIAVQKEYFTVVNYKELHFNDCGDRVAQL 141

Query: 173 LHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSIVRLQQ 215
           LHV+ A PL   Q   + QE LIVNTHLLFPHDSSL +VRL Q
Sbjct: 142 LHVELAFPLSQCQNSGIRQEVLIVNTHLLFPHDSSLCLVRLHQ 184


>Medtr5g068820.1 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr5:29157764-29161662 | 20130731
          Length = 446

 Score =  239 bits (609), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/163 (71%), Positives = 133/163 (81%)

Query: 53  VSFTTFNILAPIYKRIDPQNQGLRESDTRSFWLARNQRILDGLLAESSSIMCLQEFWVGN 112
           +S TTFNILAPIYKR++ ++Q  RES+ R  WLARNQRILD LL E SSI+CLQEFWVGN
Sbjct: 22  ISCTTFNILAPIYKRLNQEDQSSRESEDRDCWLARNQRILDWLLFERSSIICLQEFWVGN 81

Query: 113 EELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYRELLFNDFGDRVAQL 172
           EELV+MYE+RLG+AGY  FKL RTNNRGDGLL A+ KEY +VVNY+EL FND GDRVAQL
Sbjct: 82  EELVNMYEKRLGDAGYIHFKLGRTNNRGDGLLIAVQKEYFTVVNYKELHFNDCGDRVAQL 141

Query: 173 LHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSIVRLQQ 215
           LHV+ A PL   Q   + QE LIVNTHLLFPHDSSL +VRL Q
Sbjct: 142 LHVELAFPLSQCQNSGIRQEVLIVNTHLLFPHDSSLCLVRLHQ 184


>Medtr5g068820.2 | endonuclease/exonuclease/phosphatase family
           protein | HC | chr5:29158441-29161662 | 20130731
          Length = 373

 Score =  167 bits (422), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 81/111 (72%), Positives = 91/111 (81%)

Query: 105 LQEFWVGNEELVHMYEERLGNAGYHLFKLARTNNRGDGLLTAIHKEYLSVVNYRELLFND 164
           +QEFWVGNEELV+MYE+RLG+AGY  FKL RTNNRGDGLL A+ KEY +VVNY+EL FND
Sbjct: 1   MQEFWVGNEELVNMYEKRLGDAGYIHFKLGRTNNRGDGLLIAVQKEYFTVVNYKELHFND 60

Query: 165 FGDRVAQLLHVQSAAPLLPNQKGSLHQEFLIVNTHLLFPHDSSLSIVRLQQ 215
            GDRVAQLLHV+ A PL   Q   + QE LIVNTHLLFPHDSSL +VRL Q
Sbjct: 61  CGDRVAQLLHVELAFPLSQCQNSGIRQEVLIVNTHLLFPHDSSLCLVRLHQ 111