Miyakogusa Predicted Gene
- Lj0g3v0188059.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0188059.1 Non Characterized Hit- tr|B9SHN2|B9SHN2_RICCO C,
putative OS=Ricinus communis GN=RCOM_0741300 PE=4 S,32.57,6e-19,Plant
invertase/pectin methylesterase inhibi,Pectinesterase inhibitor; Plant
invertase/pectin methyl,gene.g14569.t1.1
(176 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g122750.1 | plant invertase/pectin methylesterase inhibito... 145 2e-35
Medtr4g122890.1 | plant invertase/pectin methylesterase inhibito... 142 2e-34
Medtr4g122800.1 | plant invertase/pectin methylesterase inhibito... 131 3e-31
Medtr4g122760.1 | plant invertase/pectin methylesterase inhibito... 114 4e-26
Medtr4g122740.1 | plant invertase/pectin methylesterase inhibito... 76 2e-14
Medtr4g122780.1 | plant invertase/pectin methylesterase inhibito... 74 5e-14
Medtr2g033630.1 | plant invertase/pectin methylesterase inhibito... 74 8e-14
Medtr4g007280.1 | pectinesterase inhibitor domain protein | LC |... 74 1e-13
Medtr4g122720.1 | plant invertase/pectin methylesterase inhibito... 70 1e-12
Medtr6g024035.1 | plant invertase/pectin methylesterase inhibito... 57 9e-09
Medtr4g122660.1 | plant invertase/pectin methylesterase inhibito... 54 6e-08
Medtr6g023915.1 | plant invertase/pectin methylesterase inhibito... 50 1e-06
Medtr6g023995.1 | plant invertase/pectin methylesterase inhibito... 47 7e-06
>Medtr4g122750.1 | plant invertase/pectin methylesterase inhibitor |
HC | chr4:50636427-50635600 | 20130731
Length = 173
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 106/167 (63%), Gaps = 1/167 (0%)
Query: 9 LFLFLAIVSMLVVDCEVLQP-YDARFVDEICKQTPYPSDCVQFLRQDPRSSGADVKGLAL 67
L L + + +M+ C ++ P +A + + CKQTP ++C+ +L+ DPRSS ADV GLAL
Sbjct: 7 LALAIILCTMVSSHCIIIHPKSNANLIQQTCKQTPNYANCIHYLKSDPRSSDADVTGLAL 66
Query: 68 IMVDVIKAKGTNTVNKIKQLLKGSTGEKKPLNICLDRYKGVVEINVPEAILTLKAGKITI 127
IMVD+IK+K +NKI QL+KGS +K+ LN C RY+ ++ +VP+++ LK G
Sbjct: 67 IMVDIIKSKANTALNKINQLIKGSHDQKEALNSCAGRYRAILVADVPKSVAALKQGDPKF 126
Query: 128 AEDMAAATSDEAQYCEVIFHGKSPLTIENNGMHVAAEVTRHIIRHLL 174
AED A + EA CE F GKSP++ EN MH A +T I++ LL
Sbjct: 127 AEDGANDVAIEATTCENGFKGKSPISDENIDMHDVAVITAAIVKQLL 173
>Medtr4g122890.1 | plant invertase/pectin methylesterase inhibitor |
HC | chr4:50682876-50682252 | 20130731
Length = 175
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 1/175 (0%)
Query: 1 MGNLKSLSLFLFLAIVSMLVVDCEVLQPYDARFVDEICKQTPYPSDCVQFLRQDPRSSGA 60
M K +LF + ++V +QP DA + + CK TP + C+Q+L DP++ A
Sbjct: 1 MTMFKPFALFFLILCTFLVVTQSRTIQPNDANLIQQTCKNTPNYALCIQYLNSDPKAPSA 60
Query: 61 DVKGLALIMVDVIKAKGTNTVNKIKQLLKGS-TGEKKPLNICLDRYKGVVEINVPEAILT 119
D++GL+LIMV+VIK K T T+NKI+QLLK S +K L C +Y ++ +V EA
Sbjct: 61 DIRGLSLIMVNVIKTKATATLNKIRQLLKTSPPSQKGALTSCESKYNTIIVADVAEATEA 120
Query: 120 LKAGKITIAEDMAAATSDEAQYCEVIFHGKSPLTIENNGMHVAAEVTRHIIRHLL 174
L+ G AED A+ E + CE F G SPLT +NN MH A + R IIR+LL
Sbjct: 121 LQKGNPKFAEDGASDADVEQEACEGGFSGNSPLTADNNVMHNVATIARAIIRNLL 175
>Medtr4g122800.1 | plant invertase/pectin methylesterase inhibitor |
HC | chr4:50653836-50652761 | 20130731
Length = 182
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 105/183 (57%), Gaps = 10/183 (5%)
Query: 1 MGNLKSLSLFLFLAIVSMLVVDCEVLQPYDARF---------VDEICKQTPYPSDCVQFL 51
M N K L+L LFL + ++++ +Q F ++ CK+TP + C Q L
Sbjct: 1 MTNFKPLTLCLFLQAI-VIIISLPTIQSRSTNFPSKDEKLSLIENTCKKTPNYNVCFQSL 59
Query: 52 RQDPRSSGADVKGLALIMVDVIKAKGTNTVNKIKQLLKGSTGEKKPLNICLDRYKGVVEI 111
+ +S DV GLA IMV V+KAK + +NKI QL + G +K L+ C D+Y+ ++
Sbjct: 60 KAYSGTSAGDVTGLAQIMVKVMKAKANDGLNKIHQLQRLGNGARKALSSCGDKYRAILIA 119
Query: 112 NVPEAILTLKAGKITIAEDMAAATSDEAQYCEVIFHGKSPLTIENNGMHVAAEVTRHIIR 171
++P+AI L+ G AED A ++EA YCE F+GKSPLT +NN MH + VT I+R
Sbjct: 120 DIPQAIEALEKGDPKFAEDGANDAANEATYCESEFNGKSPLTKQNNAMHDVSAVTSSIVR 179
Query: 172 HLL 174
LL
Sbjct: 180 QLL 182
>Medtr4g122760.1 | plant invertase/pectin methylesterase inhibitor |
LC | chr4:50641400-50640783 | 20130731
Length = 176
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 10/180 (5%)
Query: 1 MGNLKSLSLFLFLAIVSMLVVDCEVL----QPYDARFVDEICKQTPYPSDCVQFLRQDPR 56
M + +L+L +FL I+ V C + +A + + CKQTP + C+++L+ DPR
Sbjct: 1 MMKMNALALAIFLCII----VSCHCTNINQKTNNATLIQQTCKQTPNYALCIKYLKSDPR 56
Query: 57 SSGADVKGLALIMVDVIKAKGTNTVNKIKQLLKGSTG--EKKPLNICLDRYKGVVEINVP 114
+S AD+ AL MVD IK NK+ QLLKG + + L+ C RY+ ++ VP
Sbjct: 57 TSDADLVNYALYMVDRIKTTTITAYNKVTQLLKGGHELYQTEALSSCAGRYRSILVDVVP 116
Query: 115 EAILTLKAGKITIAEDMAAATSDEAQYCEVIFHGKSPLTIENNGMHVAAEVTRHIIRHLL 174
++I LK G +AED A +++A CE F GKSP++ EN MH A +T I++ LL
Sbjct: 117 KSIAALKQGDPKVAEDGANDAANDATTCENGFKGKSPISDENIDMHDVAVITAAIVKQLL 176
>Medtr4g122740.1 | plant invertase/pectin methylesterase inhibitor |
HC | chr4:50632402-50631730 | 20130731
Length = 179
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 18 MLVVDCEVLQPYDAR---FVDEICKQTPYPSDCVQFLRQDPRSSGADVKGLALIMVDVIK 74
+L++ C + Q + VD+ICKQTP+ C L +P + +D KG+ALIMV+ I
Sbjct: 15 ILLLSCILFQSFSLMKDDLVDQICKQTPFYDLCSSILHANPLAPKSDPKGMALIMVNDIL 74
Query: 75 AKGTNTVNKIKQLLKGSTGE--KKPLNICLDRYKGVVEINVPEAILTLKAGKITIAEDMA 132
A T+T++ I++L+K +T + ++ L C + Y VV+ +P+A + G+ A
Sbjct: 75 ANATDTLSYIEELIKQTTDKDLEQQLAFCAESYIPVVKYILPQAADAISQGRYGFASYSI 134
Query: 133 AATSDEAQYCEVIFHGKSPLTIENNG-MHVAAEVTRHIIRHLL 174
E C F G S L + N M +V I++ LL
Sbjct: 135 VDAEKEIGACNKKFPGSSSLLGDRNSIMQKLVDVAAAIVKLLL 177
>Medtr4g122780.1 | plant invertase/pectin methylesterase inhibitor |
LC | chr4:50648504-50645854 | 20130731
Length = 165
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 16/152 (10%)
Query: 40 QTPYPSDCVQFLRQDPRSSGADVKGLALIMVDVIKAKGTNTVNKIKQLLKGSTGEKKPLN 99
+TP + C+Q+L+ DP SS A V LA+IM V+ K T+NKI QLL ++
Sbjct: 8 KTPNSTLCIQYLKSDPSSSDASVLQLAIIMFRVMGNKSVTTLNKINQLLPTIPPRNTRVH 67
Query: 100 I----CLDRYKGVVEINVPEAILTLKAGKITI--------AEDMAAATSDEAQYCEVIFH 147
+ C+D YK + N I +LK ++ AE A D+A CEV F
Sbjct: 68 VALLECVDLYKSIEVFNARNGIRSLKRRRVLAWETHNPKRAEYFANQAIDKANECEVHFK 127
Query: 148 GK----SPLTIENNGMHVAAEVTRHIIRHLLL 175
G+ +P+T ENN M ++T I + +L+
Sbjct: 128 GRLVGGTPVTDENNAMKDIGKITAAICQLILV 159
>Medtr2g033630.1 | plant invertase/pectin methylesterase inhibitor |
HC | chr2:12799981-12800746 | 20130731
Length = 178
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 4/174 (2%)
Query: 5 KSLSLFLFLAIVSMLVVDCEVLQPYDARFVDEICKQTPYPSDCVQFLRQDPRSSGADVKG 64
K++++ AI +L+ +D+ICK+TP+ C L +P + D+KG
Sbjct: 3 KTITIVSSFAIHIILLASIPFTSSQSNDLIDQICKKTPFYDLCSSILNSNPLAPKTDLKG 62
Query: 65 LALIMVDVIKAKGTNTVNKIKQLLKGSTGE--KKPLNICLDRYKGVVEINVPEAILTLKA 122
+AL+MV+ I ++T+N I+ L+K +T +K L C + Y VV+ +P+A +
Sbjct: 63 VALVMVNNILTNASDTLNYIESLIKKTTDREMEKALAFCAESYIPVVKYTLPQAADAINQ 122
Query: 123 GKITIAEDMAAATSDEAQYCEVIFH--GKSPLTIENNGMHVAAEVTRHIIRHLL 174
+ A + E C F G SPL N + +V II+ LL
Sbjct: 123 NRFGFASYCISDAVKEVNSCNKKFSGVGMSPLGDRNGIVQKLVDVASAIIKQLL 176
>Medtr4g007280.1 | pectinesterase inhibitor domain protein | LC |
chr4:1071726-1071388 | 20130731
Length = 112
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 69 MVDVIKAKGTNTVNKIKQLLKGSTGEKK-PLNICLDRYKGVVEINVPEAILTLKAGKITI 127
MV+VI K T+ KI QL+ GST ++ L Y ++ NV AI L+ G +
Sbjct: 1 MVNVINTKANTTLKKILQLIPGSTPRQEFALKTRAIEYNTIIIYNVSTAISALQKGNPKL 60
Query: 128 AEDMAAATSDEAQYCEV-IFHGKSPLTIENNGMHVAAEVTRHIIRHLL 174
AE++A ++EA CE IF GKSPLT ENN MH A+ +T I++ LL
Sbjct: 61 AEELANDAANEADDCESQIFSGKSPLTTENNVMHDASVITSAIVKILL 108
>Medtr4g122720.1 | plant invertase/pectin methylesterase inhibitor |
LC | chr4:50625449-50624886 | 20130731
Length = 187
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 33 FVDEICKQTPYPSDCVQFLRQDPRSSGADVKGLALIMVDVIKAKGTNTVNKIKQLLKGST 92
VD+ICK+TP C L +P+++ D KG+A IMV+ I TNT+N I Q+L T
Sbjct: 40 LVDDICKKTPNSDLCSSILHSNPQANTTDAKGIAAIMVNDILENATNTLNYI-QVLVNQT 98
Query: 93 GE---KKPLNICLDRYKGVVEINVPEAILTLKAGKITIAEDMAAATSDEAQYCEVIFHGK 149
+ ++ +IC + Y +V+ +P+AI ++ K +A E C F G
Sbjct: 99 KDIELQRKFSICAETYIPLVKTVLPQAIDSINQNKYGLAAYSMVYVGKEIDSCNKKFSGS 158
Query: 150 --SPLTIENNGMHVAAEVTRHIIRHLL 174
SPL + +H ++ I++ L+
Sbjct: 159 TTSPLGDRTDILHKLLDIAAAILKQLI 185
>Medtr6g024035.1 | plant invertase/pectin methylesterase inhibitor |
LC | chr6:8501686-8502207 | 20130731
Length = 173
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 7 LSLFLFLAIVSMLVVDCEVLQPYDARFVD--EICKQTPYPSDCVQFLRQDPRSSGADVKG 64
+S FL L +V + V Y A V+ ++CKQT YPS C+ L+ PR+ G D+
Sbjct: 1 MSRFLILVVVFLFCV----ASSYAANDVNLQDLCKQTKYPSFCLTLLKSKPRNVGGDLVS 56
Query: 65 LALIMVDVIKAKGTNTVNKIKQLLKGSTGEKKP---LNICLDRY 105
LA +DV+ + TV IK+L+ S G K CLD +
Sbjct: 57 LARYSIDVLNTNASATVTLIKKLIAESRGVPKKQAHYKDCLDHF 100
>Medtr4g122660.1 | plant invertase/pectin methylesterase inhibitor |
HC | chr4:50592181-50592738 | 20130731
Length = 185
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 4 LKSLSLFLFLAIVSMLVVDCEVLQPYDARFVDEICKQTPYPSDCVQFLRQD-PRSSGADV 62
+K +++FL +A +L+ + + + +++IC+Q+P+ C LR S D+
Sbjct: 1 MKLITIFLEMATFIILIPSVQSTLSHTS-LLEQICRQSPHYHLCTMTLRSSINHRSKEDI 59
Query: 63 KGLALIMVDVIKAKGTNTVNKIKQ-LLKGSTG--EKKPLNICLDRYKGVVEINVPEAILT 119
G A + ++++KA + T+ +++ ++ + G +K+ + C+ Y +V +++ EA+
Sbjct: 60 AGFARLTLEIVKANASLTLEHVQKGYIQQTNGLEQKRAMRDCIALYNMIVNVHLREALNA 119
Query: 120 LKAGKITIAEDMAAATSDEAQYCEVIFHGKSPLT 153
++ I + A S +A+ CE F K+ LT
Sbjct: 120 MEKYDYKIVKQRVYAASIQAEICENKF--KNSLT 151
>Medtr6g023915.1 | plant invertase/pectin methylesterase inhibitor |
LC | chr6:8458666-8459190 | 20130731
Length = 174
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 34 VDEICKQTPYPSDCVQFLRQDPRSSGADVKGLALIMVDVIKAKGTNTVNKIKQLLKGS-- 91
V ICK+T PS C FL+ PRS D+ LA ++ AK TNT+N I +L+ S
Sbjct: 26 VHTICKKTQNPSFCSTFLKSRPRSVHGDLVSLAKYSIEDAHAKITNTINLITKLIARSRF 85
Query: 92 TGEKKPLNICLDRYKGVVEINVPEAILTLKAGK 124
EK C + G+++ + EA +++G+
Sbjct: 86 NAEKSHYRRCSIVFTGILD-EIKEAQGFIESGE 117
>Medtr6g023995.1 | plant invertase/pectin methylesterase inhibitor |
LC | chr6:8477142-8477612 | 20130731
Length = 156
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 34 VDEICKQTPYPSDCVQFLRQDPRSSGADVKGLALIMVDVIKAKGTNTVNKIKQLLKGS-- 91
V+ ICK PS C FL+ P G D+ LA ++ + TNTV+ I +L+ S
Sbjct: 7 VETICKTAKDPSFCSTFLKSRPAGVGRDLVSLAQYSIENVHTNVTNTVDLITKLVAQSRD 66
Query: 92 TGEKKPLNICLDRYKGVVEINVPEAILTLKAG 123
EK CL + +VE V EA LK G
Sbjct: 67 MNEKSHYGNCLQHFNSIVEY-VKEAEGFLKIG 97