Miyakogusa Predicted Gene

Lj0g3v0186889.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0186889.2 tr|D7M1N3|D7M1N3_ARALL Enhancer of ag-4 2
OS=Arabidopsis lyrata subsp. lyrata GN=HUA2 PE=4 SV=1,95.65,0.0000004,
,CUFF.11903.2
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g037460.1 | enhancer OF AG-4-like protein, putative | LC |...    55   3e-08
Medtr4g075060.1 | enhancer OF AG-4-like protein, putative | LC |...    53   8e-08

>Medtr1g037460.1 | enhancer OF AG-4-like protein, putative | LC |
           chr1:13828481-13816362 | 20130731
          Length = 1607

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query: 76  RPEDWDKAPDPKKYFVQFFGTEEMFLV 102
           RPEDW+K PDPKK+FVQF+GTEE+  V
Sbjct: 40  RPEDWEKKPDPKKFFVQFYGTEEIAFV 66


>Medtr4g075060.1 | enhancer OF AG-4-like protein, putative | LC |
           chr4:28645417-28636190 | 20130731
          Length = 1342

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/27 (77%), Positives = 23/27 (85%)

Query: 76  RPEDWDKAPDPKKYFVQFFGTEEMFLV 102
           RPEDW+KA DPKKYFVQFFGT E+  V
Sbjct: 40  RPEDWEKAVDPKKYFVQFFGTNEIAFV 66