Miyakogusa Predicted Gene

Lj0g3v0185729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0185729.1 tr|G7LEA6|G7LEA6_MEDTR Protein transport protein
SEC23 OS=Medicago truncatula GN=MTR_8g011270 PE=4 S,83.24,0,PROTEIN
TRANSPORT PROTEIN SEC23,NULL; zf-Sec23_Sec24,Zinc finger,
Sec23/Sec24-type; Sec23_trunk,Sec2,CUFF.11805.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g011270.1 | protein transporter Sec23-like protein | HC | ...   328   2e-90
Medtr3g084740.1 | protein transporter Sec23-like protein | HC | ...   220   7e-58
Medtr3g084740.2 | protein transporter Sec23-like protein | HC | ...   220   8e-58
Medtr1g105605.1 | protein transporter Sec23-like protein | HC | ...   122   3e-28
Medtr1g105605.2 | protein transporter Sec23-like protein | HC | ...   122   3e-28
Medtr7g111710.1 | protein transporter Sec23-like protein | HC | ...    61   7e-10
Medtr7g111710.2 | protein transporter Sec23-like protein | HC | ...    61   7e-10
Medtr7g110640.1 | protein transporter Sec23-like protein | HC | ...    55   3e-08

>Medtr8g011270.1 | protein transporter Sec23-like protein | HC |
           chr8:2969140-2977863 | 20130731
          Length = 763

 Score =  328 bits (841), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 149/179 (83%), Positives = 165/179 (92%)

Query: 3   EFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRS 62
           EF+DLE+QDGVRMPWNVIPGTKQE+ N VVPVAAIYTPIKHFP+MP+LPY+PLRCRTCRS
Sbjct: 4   EFIDLETQDGVRMPWNVIPGTKQESVNVVVPVAAIYTPIKHFPTMPILPYSPLRCRTCRS 63

Query: 63  ILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSPSDTSPH 122
           ILNPFC+VDF AKIWICPFCF RNHFP HYASIS+DN+PAELFP YTTVEYDS +D+ PH
Sbjct: 64  ILNPFCIVDFAAKIWICPFCFQRNHFPNHYASISEDNMPAELFPQYTTVEYDSVNDSGPH 123

Query: 123 VPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSGSVLSPK 181
           VPPVFLFV+DTCVIEEEIGFLRSA+SQ VELLP+NSLVGLITFG+FVHVH  G  + PK
Sbjct: 124 VPPVFLFVVDTCVIEEEIGFLRSAISQAVELLPDNSLVGLITFGSFVHVHELGFGIVPK 182


>Medtr3g084740.1 | protein transporter Sec23-like protein | HC |
           chr3:38270252-38263566 | 20130731
          Length = 771

 Score =  220 bits (560), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 105/184 (57%), Positives = 135/184 (73%), Gaps = 2/184 (1%)

Query: 6   DLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRSILN 65
           D E  DGVRM WNV P +K E++  V+P+AA  + I+  P +P LPY PLRC+TC SILN
Sbjct: 8   DPEGIDGVRMTWNVWPRSKVESSKCVIPLAATISLIRSHPDIPSLPYAPLRCKTCTSILN 67

Query: 66  PFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSP-SDTSPHVP 124
           P+  VDF AKIWICPFC+ RNHFPPHY +IS+ NLP EL+P YTTVEY  P +D +P   
Sbjct: 68  PYSRVDFTAKIWICPFCYQRNHFPPHYNAISETNLPGELYPQYTTVEYHIPHTDPNPPPS 127

Query: 125 PVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG-SVLSPKPT 183
           PVFLF++DTC+IEEEI +L+SA+ + + LLP+N+LVG ++FGT V VH  G S +S    
Sbjct: 128 PVFLFLLDTCIIEEEINYLKSALGRAIGLLPDNALVGFLSFGTQVQVHELGFSDMSKVYV 187

Query: 184 FSGA 187
           F G+
Sbjct: 188 FRGS 191


>Medtr3g084740.2 | protein transporter Sec23-like protein | HC |
           chr3:38270164-38263958 | 20130731
          Length = 702

 Score =  220 bits (560), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 105/184 (57%), Positives = 135/184 (73%), Gaps = 2/184 (1%)

Query: 6   DLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRSILN 65
           D E  DGVRM WNV P +K E++  V+P+AA  + I+  P +P LPY PLRC+TC SILN
Sbjct: 8   DPEGIDGVRMTWNVWPRSKVESSKCVIPLAATISLIRSHPDIPSLPYAPLRCKTCTSILN 67

Query: 66  PFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSP-SDTSPHVP 124
           P+  VDF AKIWICPFC+ RNHFPPHY +IS+ NLP EL+P YTTVEY  P +D +P   
Sbjct: 68  PYSRVDFTAKIWICPFCYQRNHFPPHYNAISETNLPGELYPQYTTVEYHIPHTDPNPPPS 127

Query: 125 PVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG-SVLSPKPT 183
           PVFLF++DTC+IEEEI +L+SA+ + + LLP+N+LVG ++FGT V VH  G S +S    
Sbjct: 128 PVFLFLLDTCIIEEEINYLKSALGRAIGLLPDNALVGFLSFGTQVQVHELGFSDMSKVYV 187

Query: 184 FSGA 187
           F G+
Sbjct: 188 FRGS 191


>Medtr1g105605.1 | protein transporter Sec23-like protein | HC |
           chr1:47599557-47596521 | 20130731
          Length = 746

 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 112/174 (64%), Gaps = 9/174 (5%)

Query: 3   EFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPI-KHFPSMPVLPYTPLRCRTCR 61
           +FV+LE+ +G+R  WN  P T +  ++  +P+  + TP+ +H   +P+LPY PL C  C 
Sbjct: 2   DFVELEAVEGLRWSWNSWPSTTK--SDLTIPLTIMCTPLSQHGTDLPLLPYDPLLCTRCG 59

Query: 62  SILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSPSDTSP 121
           ++LNP+  +D+ ++IW CPFC  RN FP    SI+D NLPAELFP YTTVEY S S +S 
Sbjct: 60  AVLNPYARLDYQSRIWHCPFCSQRNPFP---RSIADANLPAELFPTYTTVEYSSSSSSSS 116

Query: 122 HV---PPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVH 172
                PP F+FVID    ++E+  L++ +   +  LP+ +LV LITF + V++H
Sbjct: 117 SSLFHPPAFIFVIDVSTSQDELCSLKNEILLLLHHLPDTALVALITFDSMVYLH 170


>Medtr1g105605.2 | protein transporter Sec23-like protein | HC |
           chr1:47599557-47596521 | 20130731
          Length = 746

 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 112/174 (64%), Gaps = 9/174 (5%)

Query: 3   EFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPI-KHFPSMPVLPYTPLRCRTCR 61
           +FV+LE+ +G+R  WN  P T +  ++  +P+  + TP+ +H   +P+LPY PL C  C 
Sbjct: 2   DFVELEAVEGLRWSWNSWPSTTK--SDLTIPLTIMCTPLSQHGTDLPLLPYDPLLCTRCG 59

Query: 62  SILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSPSDTSP 121
           ++LNP+  +D+ ++IW CPFC  RN FP    SI+D NLPAELFP YTTVEY S S +S 
Sbjct: 60  AVLNPYARLDYQSRIWHCPFCSQRNPFP---RSIADANLPAELFPTYTTVEYSSSSSSSS 116

Query: 122 HV---PPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVH 172
                PP F+FVID    ++E+  L++ +   +  LP+ +LV LITF + V++H
Sbjct: 117 SSLFHPPAFIFVIDVSTSQDELCSLKNEILLLLHHLPDTALVALITFDSMVYLH 170


>Medtr7g111710.1 | protein transporter Sec23-like protein | HC |
           chr7:45883109-45872270 | 20130731
          Length = 1020

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 18/185 (9%)

Query: 13  VRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPS---MPVLPYTP---LRCRTCRSILNP 66
           +R   + IP ++  A+   +P+ A+  P+   P    +P++ + P   +RCR CR+ +NP
Sbjct: 303 LRFTTSAIPSSQSLASRWHLPLGAVVCPLAESPDEDEVPIISFAPASVVRCRRCRTYVNP 362

Query: 67  FCMVDFVAKIWICPFCFNRNHFPPHYASISD---DNLPAELFPHYT--TVEYDSPSD--T 119
           +       + + C  C   N  P  Y +  D     +     P  T  TVE+ +P++   
Sbjct: 363 YVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFVAPAEYMV 422

Query: 120 SPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPE-----NSLVGLITFGTFVHVHGS 174
            P +PPV+ F+ID  +     G +  A       L E      + +G  TF + +H +  
Sbjct: 423 RPPMPPVYFFLIDVSISAVRSGMIEVAAQTIKSCLDELPGYPRTQIGFATFDSTIHFYNM 482

Query: 175 GSVLS 179
            S L+
Sbjct: 483 KSTLA 487


>Medtr7g111710.2 | protein transporter Sec23-like protein | HC |
           chr7:45883073-45872270 | 20130731
          Length = 1020

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 18/185 (9%)

Query: 13  VRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPS---MPVLPYTP---LRCRTCRSILNP 66
           +R   + IP ++  A+   +P+ A+  P+   P    +P++ + P   +RCR CR+ +NP
Sbjct: 303 LRFTTSAIPSSQSLASRWHLPLGAVVCPLAESPDEDEVPIISFAPASVVRCRRCRTYVNP 362

Query: 67  FCMVDFVAKIWICPFCFNRNHFPPHYASISD---DNLPAELFPHYT--TVEYDSPSD--T 119
           +       + + C  C   N  P  Y +  D     +     P  T  TVE+ +P++   
Sbjct: 363 YVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFVAPAEYMV 422

Query: 120 SPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPE-----NSLVGLITFGTFVHVHGS 174
            P +PPV+ F+ID  +     G +  A       L E      + +G  TF + +H +  
Sbjct: 423 RPPMPPVYFFLIDVSISAVRSGMIEVAAQTIKSCLDELPGYPRTQIGFATFDSTIHFYNM 482

Query: 175 GSVLS 179
            S L+
Sbjct: 483 KSTLA 487


>Medtr7g110640.1 | protein transporter Sec23-like protein | HC |
           chr7:45343900-45348480 | 20130731
          Length = 851

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 13/160 (8%)

Query: 24  KQEATNAVVPVAAIYTPIKHFPSMP-VLPYTPLRCRTCRSILNPFCMVDFVAKIWICPFC 82
           K++A    +   A+ +P +   + P V+   P RC++C +  N +C +   +  W C  C
Sbjct: 151 KKQANVPSLGFGALVSPGREVSTGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVIC 210

Query: 83  FNRNHFPPHYASISDDNLPAELFPHYTT--VEYDSPSDTSPHVPPV--------FLFVID 132
              N     Y + S ++L    FP  ++  V+Y       P   PV         + VID
Sbjct: 211 RKLNASDGEYIAHSKEDL--HRFPELSSPMVDYVQTGTKRPGFVPVSDSRMSAPVVLVID 268

Query: 133 TCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVH 172
            C+ E  +  L+S++   V+ LP  + +G+I +G  V V+
Sbjct: 269 ECLDEPHLQHLQSSLHAFVDSLPPTTRLGIILYGRTVSVY 308