Miyakogusa Predicted Gene
- Lj0g3v0185409.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0185409.1 Non Characterized Hit- tr|I3T9J9|I3T9J9_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,80.21,0,DUF640,Domain of unknown function DUF640; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.11776.1
(178 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g016110.2 | DUF640 family protein | HC | chr2:4862736-4867... 268 2e-72
Medtr2g016110.1 | DUF640 family protein | HC | chr2:4862701-4867... 268 2e-72
Medtr4g079930.1 | DUF640 family protein | HC | chr4:30941651-309... 238 2e-63
Medtr2g092950.1 | DUF640 family protein | HC | chr2:39556136-395... 237 4e-63
Medtr2g076400.1 | DUF640 family protein | HC | chr2:32002605-319... 228 3e-60
Medtr5g072510.1 | DUF640 family protein | HC | chr5:30863762-308... 211 2e-55
Medtr1g442860.1 | G1-like protein | HC | chr1:15969985-15970629 ... 204 3e-53
Medtr4g094428.1 | G1-like protein | HC | chr4:37973932-37975541 ... 202 1e-52
Medtr8g086350.1 | DUF640 family protein | HC | chr8:35814297-358... 201 4e-52
Medtr3g031830.1 | DUF640 family protein | HC | chr3:26584580-265... 187 6e-48
Medtr7g115700.1 | light-dependent short hypocotyls protein | HC ... 184 3e-47
Medtr1g075990.1 | DUF640 family protein | HC | chr1:33672489-336... 182 2e-46
Medtr7g097030.2 | G1-like protein | HC | chr7:38979364-38981430 ... 180 5e-46
Medtr7g097030.1 | G1-like protein | HC | chr7:38979466-38981430 ... 180 5e-46
Medtr1g069825.1 | G1-like protein | HC | chr1:30504897-30503357 ... 180 5e-46
Medtr1g080210.1 | light-dependent short hypocotyls protein | HC ... 177 4e-45
Medtr1g114020.1 | DUF640 family protein | LC | chr1:51438670-514... 63 2e-10
>Medtr2g016110.2 | DUF640 family protein | HC | chr2:4862736-4867366
| 20130731
Length = 184
Score = 268 bits (685), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 145/187 (77%), Gaps = 12/187 (6%)
Query: 1 MSAEMQNDSTQX---------XXXXXXXXXXXXXXYESQKRRDWNTFGQYLKNLTPPISV 51
MS+ MQND+ Q YESQK+RDWNTFGQYL+N +PP+S+
Sbjct: 1 MSSSMQNDTVQASSSSSRPGGSDQQPTAAVAPLSRYESQKKRDWNTFGQYLRNQSPPVSL 60
Query: 52 SQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRA 111
SQCNFNHVL+FLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRA
Sbjct: 61 SQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRA 120
Query: 112 AYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARGIPYTXXXXXXRSLITGSHDQVQPSK 171
AYEEHGGSPE NPFG+GAIRVYLREVKE Q+KARGIPYT RS + G+H+ SK
Sbjct: 121 AYEEHGGSPENNPFGTGAIRVYLREVKECQSKARGIPYT-KKKKKRSQLKGTHNTT--SK 177
Query: 172 SFKQLAS 178
SF QLAS
Sbjct: 178 SFNQLAS 184
>Medtr2g016110.1 | DUF640 family protein | HC | chr2:4862701-4867406
| 20130731
Length = 184
Score = 268 bits (685), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 145/187 (77%), Gaps = 12/187 (6%)
Query: 1 MSAEMQNDSTQX---------XXXXXXXXXXXXXXYESQKRRDWNTFGQYLKNLTPPISV 51
MS+ MQND+ Q YESQK+RDWNTFGQYL+N +PP+S+
Sbjct: 1 MSSSMQNDTVQASSSSSRPGGSDQQPTAAVAPLSRYESQKKRDWNTFGQYLRNQSPPVSL 60
Query: 52 SQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRA 111
SQCNFNHVL+FLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRA
Sbjct: 61 SQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRA 120
Query: 112 AYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARGIPYTXXXXXXRSLITGSHDQVQPSK 171
AYEEHGGSPE NPFG+GAIRVYLREVKE Q+KARGIPYT RS + G+H+ SK
Sbjct: 121 AYEEHGGSPENNPFGTGAIRVYLREVKECQSKARGIPYT-KKKKKRSQLKGTHNTT--SK 177
Query: 172 SFKQLAS 178
SF QLAS
Sbjct: 178 SFNQLAS 184
>Medtr4g079930.1 | DUF640 family protein | HC |
chr4:30941651-30951885 | 20130731
Length = 176
Score = 238 bits (607), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 104/123 (84%), Positives = 116/123 (94%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YESQKRRDWNTFGQYL N+ PP+ +SQCN NHVLDFLRYLDQFGKTKVH+ GC+F+GQP+
Sbjct: 30 YESQKRRDWNTFGQYLNNMRPPVPLSQCNSNHVLDFLRYLDQFGKTKVHVQGCMFYGQPE 89
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GGSP+TNPF SG+IRVYLRE++E QAKARG
Sbjct: 90 PPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPDTNPFASGSIRVYLREIRESQAKARG 149
Query: 147 IPY 149
IPY
Sbjct: 150 IPY 152
>Medtr2g092950.1 | DUF640 family protein | HC |
chr2:39556136-39560514 | 20130731
Length = 167
Score = 237 bits (605), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 106/123 (86%), Positives = 115/123 (93%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YESQKRRDWNTFGQYL NL PP+ +S CN NHVL+FLRYLDQFGKTKVHL GC+F+GQP+
Sbjct: 24 YESQKRRDWNTFGQYLNNLRPPVPLSHCNSNHVLEFLRYLDQFGKTKVHLQGCMFYGQPE 83
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPCTCPLRQAWGSLDALIGRLRAAYEE+GG+PETNPF SGAIRVYLREV+E QAKARG
Sbjct: 84 PPAPCTCPLRQAWGSLDALIGRLRAAYEENGGTPETNPFASGAIRVYLREVRECQAKARG 143
Query: 147 IPY 149
IPY
Sbjct: 144 IPY 146
>Medtr2g076400.1 | DUF640 family protein | HC |
chr2:32002605-31999823 | 20130731
Length = 178
Score = 228 bits (580), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 100/123 (81%), Positives = 113/123 (91%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YESQKRRDWNTFGQYL+N PP+++S CN NHVL+FLRYLDQFGKTKVHL GC+FFGQ +
Sbjct: 34 YESQKRRDWNTFGQYLRNQRPPVALSNCNSNHVLEFLRYLDQFGKTKVHLQGCLFFGQTE 93
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PP PCTCPL+QAWGSLDALIGRLRAAYEE+GG PETNPF SG+IR+YLREV++ QAKARG
Sbjct: 94 PPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGSIRIYLREVRDSQAKARG 153
Query: 147 IPY 149
IPY
Sbjct: 154 IPY 156
>Medtr5g072510.1 | DUF640 family protein | HC |
chr5:30863762-30865232 | 20130731
Length = 225
Score = 211 bits (538), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 112/123 (91%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YESQKRRDWNTF QYL+N PP++++ C+ HV++FL+YLDQFGKTKVH+ GC +FGQP+
Sbjct: 38 YESQKRRDWNTFQQYLRNHKPPLTLALCSGAHVIEFLKYLDQFGKTKVHVIGCPYFGQPN 97
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PP+PC CPL+QAWGSLDALIGRLRAA+EE+GG PE+NPFG+ A+R+YLREVK+GQAKARG
Sbjct: 98 PPSPCACPLKQAWGSLDALIGRLRAAFEENGGKPESNPFGTRAVRIYLREVKDGQAKARG 157
Query: 147 IPY 149
+PY
Sbjct: 158 VPY 160
>Medtr1g442860.1 | G1-like protein | HC | chr1:15969985-15970629 |
20130731
Length = 214
Score = 204 bits (520), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 107/123 (86%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YE+QKRRDWNTFGQYL+N PP+S+S+C+ HVL+FLRYLDQFGKTKVH C F+G P+
Sbjct: 66 YENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTLICPFYGHPN 125
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPA C CPLRQAWGSLDALIGRLRAA+EE+GG PE NPFG+ A+R+YLREV++ QAKARG
Sbjct: 126 PPASCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARG 185
Query: 147 IPY 149
I Y
Sbjct: 186 ISY 188
>Medtr4g094428.1 | G1-like protein | HC | chr4:37973932-37975541 |
20130731
Length = 234
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 105/123 (85%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YESQKRRDWNTFGQYLKN PP+++S+C+ HVL+FLRYLDQFGKTKVH C +FG
Sbjct: 47 YESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHVLEFLRYLDQFGKTKVHSENCAYFGNSH 106
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PP PC CPL+QAWGSLDALIGRLRAA+EE+GGS E NPFG+ A+R+YLREV++ QAKARG
Sbjct: 107 PPGPCPCPLKQAWGSLDALIGRLRAAFEENGGSQEMNPFGARAVRLYLREVRDAQAKARG 166
Query: 147 IPY 149
I Y
Sbjct: 167 IGY 169
>Medtr8g086350.1 | DUF640 family protein | HC |
chr8:35814297-35815054 | 20130731
Length = 185
Score = 201 bits (510), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/123 (82%), Positives = 108/123 (87%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YESQKRRDWNTF QYLK+ P + +S CNFNHVLDFLRYLDQFGKTKVH GCIFFGQP
Sbjct: 32 YESQKRRDWNTFNQYLKSQNPLVPLSHCNFNHVLDFLRYLDQFGKTKVHFQGCIFFGQPT 91
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPC CPL+QAWGSLDALIGRLRAAYEE+GGS ETNPF GAIRVYLREVK+ Q KARG
Sbjct: 92 PPAPCACPLKQAWGSLDALIGRLRAAYEENGGSSETNPFAGGAIRVYLREVKDSQQKARG 151
Query: 147 IPY 149
IPY
Sbjct: 152 IPY 154
>Medtr3g031830.1 | DUF640 family protein | HC |
chr3:26584580-26586158 | 20130731
Length = 223
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 111/123 (90%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YESQKRRDWNTF QYL+N PP+++ +C+ HV++FL+YLDQFGKTKVH+ GC +FG P+
Sbjct: 43 YESQKRRDWNTFLQYLQNHKPPLTLVRCSGAHVIEFLKYLDQFGKTKVHVSGCPYFGHPN 102
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPC CPL+QAWGSLDALIGRLRAAYEE+GG PE+NPFG+ A+R+YLREV+EGQAKARG
Sbjct: 103 PPAPCACPLKQAWGSLDALIGRLRAAYEENGGRPESNPFGAKAVRIYLREVREGQAKARG 162
Query: 147 IPY 149
IPY
Sbjct: 163 IPY 165
>Medtr7g115700.1 | light-dependent short hypocotyls protein | HC |
chr7:47835405-47837009 | 20130731
Length = 170
Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 84/124 (67%), Positives = 99/124 (79%), Gaps = 1/124 (0%)
Query: 27 YESQKRRDWNTFGQYLKNLTP-PISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQP 85
YESQKRRDWNTF QYL+N P P+S S CN HVL+FL YLDQFGKTKVH C FFG P
Sbjct: 28 YESQKRRDWNTFCQYLRNHRPVPLSASMCNGTHVLEFLHYLDQFGKTKVHNPTCPFFGMP 87
Query: 86 DPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKAR 145
+PP+PC CPLRQAWGSLDAL+GRLRAAY++ +NPFG GA+R YLR+V++ Q+KAR
Sbjct: 88 NPPSPCACPLRQAWGSLDALVGRLRAAYDQEINGGSSNPFGDGAVRFYLRDVRDFQSKAR 147
Query: 146 GIPY 149
G+ Y
Sbjct: 148 GVSY 151
>Medtr1g075990.1 | DUF640 family protein | HC |
chr1:33672489-33671080 | 20130731
Length = 197
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 108/123 (87%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YE+QKRRDWNTFGQYL+N PP+S+S+C+ HVL+FLRYLDQFGKTKVH C FFG P+
Sbjct: 54 YENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHSQICPFFGHPN 113
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPC CPLRQAWGSLDALIGRLRAA+EE+GG PE NPFG+ A+R++LREV++ Q+KARG
Sbjct: 114 PPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEDNPFGARAVRLFLREVRDSQSKARG 173
Query: 147 IPY 149
I Y
Sbjct: 174 ISY 176
>Medtr7g097030.2 | G1-like protein | HC | chr7:38979364-38981430 |
20130731
Length = 214
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 109/123 (88%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YE+QKRRDWNTFGQYLKN PP+S+S+C+ HVL+FLRYLDQFGKTKVH C F+G P+
Sbjct: 65 YENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPN 124
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPC CPLRQAWGSLDALIGRLRAA+EE+GG PETNPFG+ A+R+YLREV++ Q+KARG
Sbjct: 125 PPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARG 184
Query: 147 IPY 149
I Y
Sbjct: 185 ISY 187
>Medtr7g097030.1 | G1-like protein | HC | chr7:38979466-38981430 |
20130731
Length = 214
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 109/123 (88%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YE+QKRRDWNTFGQYLKN PP+S+S+C+ HVL+FLRYLDQFGKTKVH C F+G P+
Sbjct: 65 YENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPN 124
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPC CPLRQAWGSLDALIGRLRAA+EE+GG PETNPFG+ A+R+YLREV++ Q+KARG
Sbjct: 125 PPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARG 184
Query: 147 IPY 149
I Y
Sbjct: 185 ISY 187
>Medtr1g069825.1 | G1-like protein | HC | chr1:30504897-30503357 |
20130731
Length = 222
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 109/123 (88%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YE+QKRRDWNTFGQYLKN PP+S+S+C+ HVL+FLRYLDQFGKTKVH C F+G P+
Sbjct: 53 YENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPN 112
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPC CPLRQAWGSLDALIGRLRAA+EE+GG PETNPFG+ A+R+YLREV++ Q+KARG
Sbjct: 113 PPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARG 172
Query: 147 IPY 149
I Y
Sbjct: 173 ISY 175
>Medtr1g080210.1 | light-dependent short hypocotyls protein | HC |
chr1:35607822-35609699 | 20130731
Length = 182
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 108/123 (87%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQFGKTKVHLHGCIFFGQPD 86
YE+QKRRDWNTF QYL+N PP+S++ C+ +HVL+FL YLDQFGKTKVH H C FFG P+
Sbjct: 41 YENQKRRDWNTFCQYLRNHRPPLSLALCSGSHVLEFLNYLDQFGKTKVHNHPCPFFGIPN 100
Query: 87 PPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKEGQAKARG 146
PPAPC CPLRQAWGSLDALIGRLRAAYEE+GG PETNPFGS ++R+YLR+V++ QAK+RG
Sbjct: 101 PPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGSRSVRIYLRDVRDFQAKSRG 160
Query: 147 IPY 149
+ Y
Sbjct: 161 VSY 163
>Medtr1g114020.1 | DUF640 family protein | LC |
chr1:51438670-51440377 | 20130731
Length = 177
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 27 YESQKRRDWNTFGQYLKNLTPPISVSQCNFNHVLDFLRYLDQF 69
YE+QKRRDWNTF QYLKN PP+S+S C HVL+FLR L ++
Sbjct: 72 YENQKRRDWNTFVQYLKNHRPPLSLSLCTGAHVLEFLRELLKY 114