Miyakogusa Predicted Gene
- Lj0g3v0184659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0184659.1 Non Characterized Hit- tr|C5Y130|C5Y130_SORBI
Putative uncharacterized protein Sb04g017380
OS=Sorghu,38.05,8e-19,GLR3409 PROTEIN,NULL; ATP-DEPENDENT CLP
PROTEASE,NULL; no description,Double Clp-N motif; seg,NULL;
,CUFF.11717.1
(247 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g464150.1 | double Clp-N motif P-loop nucleoside triphosph... 259 2e-69
Medtr5g071060.2 | double Clp-N motif P-loop nucleoside triphosph... 225 4e-59
Medtr5g071060.1 | double Clp-N motif P-loop nucleoside triphosph... 225 4e-59
Medtr3g070850.1 | double Clp-N motif P-loop nucleoside triphosph... 181 7e-46
Medtr4g129230.1 | 101 kDa heat shock protein; HSP101-like protei... 111 8e-25
Medtr1g090640.1 | double Clp-N motif P-loop nucleoside triphosph... 91 1e-18
Medtr1g057150.1 | double Clp-N motif P-loop nucleoside triphosph... 89 3e-18
Medtr4g127290.1 | heat shock-like protein | HC | chr4:52807296-5... 81 9e-16
Medtr2g038200.1 | heat shock-like protein, putative | HC | chr2:... 81 1e-15
>Medtr3g464150.1 | double Clp-N motif P-loop nucleoside triphosphate
hydrolase superfamily protein | HC |
chr3:25772408-25778862 | 20130731
Length = 1080
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/256 (59%), Positives = 168/256 (65%), Gaps = 20/256 (7%)
Query: 1 MPTSVSAARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPTSALRDA--CAR 58
MPT VS ARQCLTDEAARALD+AVSVARRRSH QTTSLHA+SALLSLP++ALR A C+R
Sbjct: 1 MPTPVSTARQCLTDEAARALDEAVSVARRRSHPQTTSLHAISALLSLPSNALRTACSCSR 60
Query: 59 AGSCSYSPRLQLRALELSVGVSLDRQTTSKS---ANDGGDDGPPVSNSLMXXXXXXXXXX 115
A + YSPRL RALELSVGVSLDR T+K+ G D GPPVSNSLM
Sbjct: 61 ATTFPYSPRLHFRALELSVGVSLDRLPTTKTTAVVTSGDDGGPPVSNSLMAAIKRSQANQ 120
Query: 116 XXHPESFH--XXXXXXXXXXSQTASLLKAELKHFILSILDDPIVSRVFAEAGFRSYDIKL 173
HP+SFH +QTAS LK ELKHFILSILDDPIVSRVFAEAGFRSYD+K
Sbjct: 121 RRHPDSFHLLQIMQQQQQNQNQTASFLKVELKHFILSILDDPIVSRVFAEAGFRSYDVKF 180
Query: 174 ALLQXXXXXXXXXXXXXXXXXXXXXXXXXXLCNIDPARSGFPFALSGSDDNSRRIAEVLA 233
ALLQ LCNI+P R F D+NSRR+ +VLA
Sbjct: 181 ALLQ-------PPPPPPSSRFFHRSSPPVFLCNIEPDR----FETVRFDENSRRVVDVLA 229
Query: 234 RK--SKRNPLLMGVYA 247
K SKR+PLLMGVYA
Sbjct: 230 GKSGSKRSPLLMGVYA 245
>Medtr5g071060.2 | double Clp-N motif P-loop nucleoside triphosphate
hydrolase superfamily protein | HC |
chr5:30105997-30111708 | 20130731
Length = 1059
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/253 (58%), Positives = 168/253 (66%), Gaps = 25/253 (9%)
Query: 1 MPTSVSAARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPTSALRDACARAG 60
MPT VS+ARQ LTDEAARALDDAV+VARRRSHAQTTSLH +SALLSLP+S+LRDA RA
Sbjct: 1 MPTPVSSARQFLTDEAARALDDAVAVARRRSHAQTTSLHTISALLSLPSSSLRDAICRAR 60
Query: 61 SC----SYSPRLQLRALELSVGVSLDRQTTSKSANDGGDDGPPVSNSLMXXXXXXXXXXX 116
+ S+S RL LRALELSVGVSLDR +SK + + PPVSNSLM
Sbjct: 61 TAVRFPSFSHRLHLRALELSVGVSLDRLPSSKPS---PVEEPPVSNSLMAAIKRSQANQR 117
Query: 117 XHPESFHXXXXXXXXXXSQTASLLKAELKHFILSILDDPIVSRVFAEAGFRSYDIKLALL 176
PESFH T SLLK ELKHF+LSILDDPIV+RVF+EAGFRS D+KLALL
Sbjct: 118 RSPESFH-----FYNHNGTTPSLLKVELKHFVLSILDDPIVNRVFSEAGFRSCDVKLALL 172
Query: 177 QXXXXXXXXXXXXXXXXXXXXXXXXXXLCNIDPARSGF-PFALSGSDDNSRRIAEVLARK 235
Q LCN++P R+G PF L G D+NSRRIAEV+A K
Sbjct: 173 Q----------PPVQSSSRFLSSPPVFLCNLEPGRTGLTPFPL-GVDENSRRIAEVIAMK 221
Query: 236 SKR-NPLLMGVYA 247
K+ NPLLMGVYA
Sbjct: 222 GKKMNPLLMGVYA 234
>Medtr5g071060.1 | double Clp-N motif P-loop nucleoside triphosphate
hydrolase superfamily protein | HC |
chr5:30105997-30111708 | 20130731
Length = 1092
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/253 (58%), Positives = 168/253 (66%), Gaps = 25/253 (9%)
Query: 1 MPTSVSAARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPTSALRDACARAG 60
MPT VS+ARQ LTDEAARALDDAV+VARRRSHAQTTSLH +SALLSLP+S+LRDA RA
Sbjct: 1 MPTPVSSARQFLTDEAARALDDAVAVARRRSHAQTTSLHTISALLSLPSSSLRDAICRAR 60
Query: 61 SC----SYSPRLQLRALELSVGVSLDRQTTSKSANDGGDDGPPVSNSLMXXXXXXXXXXX 116
+ S+S RL LRALELSVGVSLDR +SK + + PPVSNSLM
Sbjct: 61 TAVRFPSFSHRLHLRALELSVGVSLDRLPSSKPS---PVEEPPVSNSLMAAIKRSQANQR 117
Query: 117 XHPESFHXXXXXXXXXXSQTASLLKAELKHFILSILDDPIVSRVFAEAGFRSYDIKLALL 176
PESFH T SLLK ELKHF+LSILDDPIV+RVF+EAGFRS D+KLALL
Sbjct: 118 RSPESFH-----FYNHNGTTPSLLKVELKHFVLSILDDPIVNRVFSEAGFRSCDVKLALL 172
Query: 177 QXXXXXXXXXXXXXXXXXXXXXXXXXXLCNIDPARSGF-PFALSGSDDNSRRIAEVLARK 235
Q LCN++P R+G PF L G D+NSRRIAEV+A K
Sbjct: 173 Q----------PPVQSSSRFLSSPPVFLCNLEPGRTGLTPFPL-GVDENSRRIAEVIAMK 221
Query: 236 SKR-NPLLMGVYA 247
K+ NPLLMGVYA
Sbjct: 222 GKKMNPLLMGVYA 234
>Medtr3g070850.1 | double Clp-N motif P-loop nucleoside triphosphate
hydrolase superfamily protein | HC |
chr3:31780989-31785558 | 20130731
Length = 1081
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 149/258 (57%), Gaps = 28/258 (10%)
Query: 1 MPTSVSAARQCLTDEAARALDDAVSVARRRSHAQTTSLHA-VSALLSLPTSALRDACARA 59
MPT VS+ARQCLT EA +AL+DAV+VA+RR HAQTTSLHA + L +S LRDAC+R+
Sbjct: 1 MPTPVSSARQCLTPEAIQALNDAVAVAKRRGHAQTTSLHAISALLSLPSSSILRDACSRS 60
Query: 60 GSCSYSPRLQLRALELSVGVSLDRQTTSKSANDGGDDGPPVSNSLMXXXXXXXXXXXXHP 119
+ +YSPRLQ +AL+L + VSLDR +S + N D PPVSNSLM HP
Sbjct: 61 RNSAYSPRLQFKALDLCLSVSLDRSPSSHN-NVSSDHEPPVSNSLMAAIKRSQANQRRHP 119
Query: 120 ESFHXXXXXXXXXXSQTASL--LKAELKHFILSILDDPIVSRVFAEAGFRSYDIKLALLQ 177
++FH QT S+ +K EL+H +LS+LDDP+VSRVFAEAGFRS +IKLA+L+
Sbjct: 120 DNFHFYHQQQQLQSQQTFSVSSVKVELQHLVLSVLDDPVVSRVFAEAGFRSSEIKLAILR 179
Query: 178 XXXXXXXXXXXXXXXXXXXXXXXXXXLCNI--DPARSGFPF---------ALSGSDDNSR 226
LCN+ P R + D+N R
Sbjct: 180 -------------PLPHLFRRGPPVFLCNLPEQPRRGAGFGFGLGFPFLSGVGDVDENFR 226
Query: 227 RIAEVLARKSKRNPLLMG 244
RI E+L R +NPLL+G
Sbjct: 227 RIGEILVRSKGKNPLLLG 244
>Medtr4g129230.1 | 101 kDa heat shock protein; HSP101-like protein |
HC | chr4:53817793-53821564 | 20130731
Length = 1027
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 118/256 (46%), Gaps = 24/256 (9%)
Query: 1 MPTSVSAARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPTSALRDACARAG 60
M +S +Q LT EAA L+ +++ A RR+H QTT LH + LL+ P+ LR AC ++
Sbjct: 1 MRAGLSTIQQTLTPEAASVLNHSIAEAGRRNHGQTTPLHVAATLLASPSGYLRQACIKSH 60
Query: 61 SCSYSPRLQLRALELSVGVSLDRQTTSKSANDGGDDGPPVSNSLMXX-XXXXXXXXXXHP 119
S P LQ RALEL V+L+R TS++A+ PP+SN+LM +P
Sbjct: 61 PNSSHP-LQCRALELCFSVALERLPTSQNASSTSAMEPPISNALMAALKRAQAHQRRGYP 119
Query: 120 ESFHXXXXXXXXXXSQTASLLKAELKHFILSILDDPIVSRVFAEAGFRSYDIKLALLQXX 179
E Q +K EL+ I+SILDDP VSRV EA F S +K + Q
Sbjct: 120 EQ-----------QQQPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSL 168
Query: 180 XXXXXXXXXXXXX---------XXXXXXXXXXXLCNIDPARSGFPFALSGS--DDNSRRI 228
N + G ALSG+ D +R+
Sbjct: 169 NSVAPSPVTVNSNPMMGFRPGMVTPGAAPTRNLYMNPRLQQQGGAAALSGAHKGDEVKRV 228
Query: 229 AEVLARKSKRNPLLMG 244
E+L R KRNP+L+G
Sbjct: 229 VEILMRTKKRNPVLVG 244
>Medtr1g090640.1 | double Clp-N motif P-loop nucleoside triphosphate
hydrolase superfamily protein | HC |
chr1:40589246-40585935 | 20130731
Length = 849
Score = 90.5 bits (223), Expect = 1e-18, Method: Composition-based stats.
Identities = 64/166 (38%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 10 QCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPTSALRDACARAGSCSYSPRLQ 69
Q LT EAA + AV++A RR HAQ T LH SA+L+ T LR AC + C P LQ
Sbjct: 11 QALTQEAATVVKQAVNLATRRGHAQVTPLHVASAMLATSTGILRKACLQ---CHSHP-LQ 66
Query: 70 LRALELSVGVSLDRQTTSKSANDGG---DDGPPVSNSLMXXXXXXXXXXXXHPESFHXXX 126
+ALEL V+L+R S + G P +SN+L+ H
Sbjct: 67 CKALELCFNVALNRLPASTQSPLLGPQYSTTPSLSNALVAAFKRAQA---------HQRR 117
Query: 127 XXXXXXXSQTASLLKAELKHFILSILDDPIVSRVFAEAGFRSYDIK 172
Q LK E++ I+SILDDP VSRV EAGF S +K
Sbjct: 118 GTIENQQQQHILALKIEVEQLIISILDDPSVSRVMREAGFSSTLVK 163
>Medtr1g057150.1 | double Clp-N motif P-loop nucleoside triphosphate
hydrolase superfamily protein | HC |
chr1:25117416-25121709 | 20130731
Length = 808
Score = 89.4 bits (220), Expect = 3e-18, Method: Composition-based stats.
Identities = 65/185 (35%), Positives = 88/185 (47%), Gaps = 22/185 (11%)
Query: 1 MPTSVSAARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPTSALRDACARAG 60
M T + +Q LT EAA + A+++A+RR HAQ T LH + +LS+ LR AC +
Sbjct: 1 MRTGNCSLQQGLTTEAANIIKQAITLAKRRGHAQVTPLHVANTMLSVTNGLLRTACLQ-- 58
Query: 61 SCSYSPRLQLRALELSVGVSLDR--QTTSKSANDGGDDG------PPVSNSLMXXXXXXX 112
S+S LQ +ALEL V+L+R TT S G P +SN+L+
Sbjct: 59 --SHSHPLQCKALELCFNVALNRLPATTCNSPMLGSHHSQSQSQYPSISNALVAAFKRAQ 116
Query: 113 XXXXXHPESFHXXXXXXXXXXSQTASLLKAELKHFILSILDDPIVSRVFAEAGFRSYDIK 172
Q +K EL+ I+SILDDP VSRV EAGF S +K
Sbjct: 117 A----------HQRRGSIENQQQPLLTVKIELEQLIISILDDPSVSRVMREAGFNSTQVK 166
Query: 173 LALLQ 177
+ Q
Sbjct: 167 TNVEQ 171
>Medtr4g127290.1 | heat shock-like protein | HC |
chr4:52807296-52803794 | 20130731
Length = 820
Score = 81.3 bits (199), Expect = 9e-16, Method: Composition-based stats.
Identities = 62/175 (35%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 1 MPTSVSAARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPTSALRDACARAG 60
M + A +Q LT EAA L ++ +ARRR H Q T LH LL+L S+ + AC ++
Sbjct: 1 MRSGGCALQQTLTAEAASVLKHSLVLARRRGHPQVTPLHVAITLLTLRLSSFKRACLKSH 60
Query: 61 SCSYSPR---LQLRALELSVGVSLDRQTTSKSANDGGDDGPPVSNSLMXXXXXXXXXXXX 117
+ LQ RALEL V+L+R T+ S P +SN+L+
Sbjct: 61 QPHHQTSQHPLQSRALELCFNVALNRLPTTPSPLIHSQ--PSLSNALIAALKRAQAHQ-- 116
Query: 118 HPESFHXXXXXXXXXXSQTASLLKAELKHFILSILDDPIVSRVFAEAGFRSYDIK 172
QT +K EL+ I+SILDDP VSRV EAGF S +K
Sbjct: 117 -----RRGSIEQQQQHQQTVLTVKVELEQLIISILDDPSVSRVMREAGFSSTLVK 166
>Medtr2g038200.1 | heat shock-like protein, putative | HC |
chr2:16610767-16615642 | 20130731
Length = 1009
Score = 80.9 bits (198), Expect = 1e-15, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 1 MPTSVSAARQCLTDEAARALDDAVSVARRRSHAQTTSLHAVSALLSLPTSALRDACARAG 60
M + ++ LT EAA L ++ +ARRR HAQ T LH + LLSLP+S+LR+AC ++
Sbjct: 1 MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQ 60
Query: 61 SCSYSPRLQLRALELSVGVSLDR-QTTSKSANDGGDDGPPVSNSLMXXXXXXXXXXXXHP 119
+ P LQ RALEL V+L+R TT+ S P +SN+L+
Sbjct: 61 QQNNHP-LQCRALELCFNVALNRLPTTTTSPLLQPQHVPSLSNALIAALKRA-------- 111
Query: 120 ESFHXXXXXXXXXXSQTASLL--KAELKHFILSILDDPIVSRVFAEAGFRSYDIK 172
++ Q LL K EL ILSILDDP VSRV EAGF S +K
Sbjct: 112 QAHQRRGCIEQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVK 166