Miyakogusa Predicted Gene
- Lj0g3v0183899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0183899.1 Non Characterized Hit- tr|I3S795|I3S795_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,seg,NULL,CUFF.11671.1
(233 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g084040.1 | hypothetical protein | HC | chr1:37475119-3747... 304 4e-83
Medtr7g112110.1 | hypothetical protein | HC | chr7:46085786-4608... 223 1e-58
Medtr7g112120.1 | transmembrane protein, putative | HC | chr7:46... 203 1e-52
>Medtr1g084040.1 | hypothetical protein | HC |
chr1:37475119-37477510 | 20130731
Length = 271
Score = 304 bits (779), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/233 (69%), Positives = 181/233 (77%), Gaps = 13/233 (5%)
Query: 1 MGSGTVACGVKEGVKLYFYNIRSAHVERARHRAIESALVDAVSQGMSPKDSATYVQKESK 60
MGSGT+AC VKEGVKLYFY+IRS HVE+AR RAIESALVDAVSQGM P D+A + QKESK
Sbjct: 52 MGSGTLACAVKEGVKLYFYSIRSTHVEKARQRAIESALVDAVSQGMPPTDAAKHAQKESK 111
Query: 61 KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQKLG 120
KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGT+TEGFLR EQ LG
Sbjct: 112 KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTITEGFLRGTGTLFGAYGGGFFGEQSLG 171
Query: 121 RFGYLVGSHLGSWVGGRIGLMVYDVFNGVNLLLQFVQTGEIEVHKASANENSEAPEGYFF 180
R GYLVGSH+GSWVGGRIGLM+YDV NGV+LLL+FVQTGEIEV K +ENS+AP F
Sbjct: 172 RIGYLVGSHMGSWVGGRIGLMIYDVINGVHLLLEFVQTGEIEVRKTLVHENSDAPYTSFD 231
Query: 181 GEIPVYDSSEGSNIYESSPSEESNIYESSPSEESNAYESTEHQSFETYGDSEL 233
GE+P +D SE S+ YESSP+EESNA ES E+QS+ET +SEL
Sbjct: 232 GEVPTFDR-----------SERSSSYESSPTEESNADESMEYQSYET--NSEL 271
>Medtr7g112110.1 | hypothetical protein | HC |
chr7:46085786-46087561 | 20130731
Length = 215
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/155 (69%), Positives = 123/155 (79%)
Query: 1 MGSGTVACGVKEGVKLYFYNIRSAHVERARHRAIESALVDAVSQGMSPKDSATYVQKESK 60
+GSG++ACGVKE VKLY NIRSAHVE+ARH AI+SALVDA SQGMSP S + QK+ K
Sbjct: 54 LGSGSLACGVKESVKLYVNNIRSAHVEKARHDAIQSALVDAASQGMSPIVSEKHAQKQGK 113
Query: 61 KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQKLG 120
KAAKLA+R+A RI GPIISSGWDFFEA+YYGGT TEGFLR EQ+LG
Sbjct: 114 KAAKLATRKANRITGPIISSGWDFFEAVYYGGTFTEGFLRGTGTLFGTYGVGFVGEQRLG 173
Query: 121 RFGYLVGSHLGSWVGGRIGLMVYDVFNGVNLLLQF 155
RFGYLVGS LGSW+GGRIGLMVYDV NGV+ +LQ+
Sbjct: 174 RFGYLVGSQLGSWIGGRIGLMVYDVANGVHFMLQY 208
>Medtr7g112120.1 | transmembrane protein, putative | HC |
chr7:46090571-46092555 | 20130731
Length = 218
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 115/154 (74%), Gaps = 1/154 (0%)
Query: 1 MGSGTVACGVKEGVKLYFYNIRSAHVERARHRAIESALVDAVSQGMSPKDSATYVQKESK 60
MGSGT+ACGVKE VKLY NIRS+HVE+AR AI SALVDA SQGM P DS Y QKE
Sbjct: 53 MGSGTLACGVKESVKLYANNIRSSHVEKARDNAILSALVDAASQGMPPTDSEKYAQKEGA 112
Query: 61 KAAKLASRQAKRIIGPIISSGWDFFEAIYYGGTVTEGFLRXXXXXXXXXXXXXXXEQKLG 120
KA KLA+ +A R+IGPIIS GWDFFEA+Y+GGT TEGFLR EQ LG
Sbjct: 113 KAMKLATHKANRVIGPIISFGWDFFEAVYHGGTFTEGFLRGTGTFFGTYSGGFMGEQILG 172
Query: 121 RF-GYLVGSHLGSWVGGRIGLMVYDVFNGVNLLL 153
RF GYLVGS LGSWVGGRIGLM+YDV NGV+ ++
Sbjct: 173 RFGGYLVGSQLGSWVGGRIGLMLYDVVNGVHYII 206