Miyakogusa Predicted Gene

Lj0g3v0182159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0182159.1 Non Characterized Hit- tr|B9RB21|B9RB21_RICCO
Ataxia telangiectasia mutated, putative OS=Ricinus com,57,0,PREDICTED:
HYPOTHETICAL PROTEIN, PARTIAL,NULL; ATAXIA TELANGIECTASIA MUTATED
(ATM)-RELATED,NULL; seg,CUFF.11609.1
         (1431 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g077860.1 | ataxia telangiectasia mutated protein, putativ...  2105   0.0  

>Medtr3g077860.1 | ataxia telangiectasia mutated protein, putative |
            HC | chr3:34986185-35052991 | 20130731
          Length = 3033

 Score = 2105 bits (5455), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1061/1438 (73%), Positives = 1190/1438 (82%), Gaps = 16/1438 (1%)

Query: 1    MVFFLPSAIYALCAGCVPFTQCFEEHPLLYRSF-VTESLDNCHKFEDPKHRCLHEFLDCS 59
            ++ ++P A++ALC GCV FT+CF+E PL+Y SF VTESLDN HK EDPKH CLHEFLDCS
Sbjct: 584  ILLYMPCAMFALCVGCVTFTECFKEIPLVYSSFDVTESLDNSHKLEDPKHECLHEFLDCS 643

Query: 60   LEVLTKIDKVSKDEVSQLKILPHVRVPREVSDQLLREIETSFLGALEEKEKIERHLPDIF 119
            +EVLT+I KVS  EVS+L+I P +RVP+E+SDQLL E+E+S L  L E+E  E HLPDIF
Sbjct: 644  VEVLTEIHKVSNAEVSELQIFPGIRVPQEISDQLLLEMESSILEVLVEEENNETHLPDIF 703

Query: 120  LTCSLLSNVLYGSFFTRKLNVSFCSKLSQYLQVMLNNAVRIIQADRDLQAFSSLSFDPTC 179
            L CSLLSN+LYG  FTRK+NVSFCSKLSQYLQV LNNAVRIIQ + D +A SSLS+ PTC
Sbjct: 704  LKCSLLSNLLYGYVFTRKINVSFCSKLSQYLQVRLNNAVRIIQEESDHRA-SSLSYVPTC 762

Query: 180  NDTGSLASSVHCFLSSPIFNERIDQSLMDTVPLGEVIQVVERLLKAFVNLYEGYSQYVMN 239
             DTGSLA+SVHCFLSSPIF E  DQ+L D VP GEVIQ VERLLK+FV LY+GYSQ++ +
Sbjct: 763  EDTGSLAASVHCFLSSPIFCEWRDQNL-DFVPFGEVIQSVERLLKSFVGLYDGYSQHLAS 821

Query: 240  LESGTILRDITSSD-------------RIADMELDVNDDSRDVDSLVVGKTNGTGLSSST 286
            L+S  I++D  S+D             RI DMELDVNDDSRD DSL+V K  G+G+SSS 
Sbjct: 822  LQSDMIMQDTASTDSVPSSCSYDISKSRIVDMELDVNDDSRDADSLLVVKKIGSGVSSSV 881

Query: 287  ENWKIGMISLISNFFSASHVLTWDILFNLMEKEYDPKVRGKILYHLCQHPHWSSSAKFVD 346
            E WK+GMISLIS FF AS VLTW  LF LME+EYDPKVRGKIL+HLC+HPHWSSS++ +D
Sbjct: 882  EKWKVGMISLISCFFYASPVLTWSTLFKLMEEEYDPKVRGKILHHLCEHPHWSSSSRLID 941

Query: 347  LVNVMNDILIEQVGLKLACGSVXXXXXXXXXXXXXXDVVDKDKRDLCIREVETEQCFLSL 406
            L+NVM+DI+ EQVGLKL+ G+V              DVV K+K  L + EVETEQCF SL
Sbjct: 942  LINVMSDIITEQVGLKLSSGNVLTSTHALLCNLASLDVVGKEKCGLYLSEVETEQCFQSL 1001

Query: 407  GNVMHKLSDVDFDWFGRVKLIDCICYLISLQPQIGQTMIERLLLMLNDIDYRVRLFLARR 466
             +++H LS VD DWFGRVKLIDCIC LISL PQ GQTMIERLLLM+NDIDYRVRL  ARR
Sbjct: 1002 TDLVHNLSKVDLDWFGRVKLIDCICNLISLHPQFGQTMIERLLLMINDIDYRVRLSFARR 1061

Query: 467  IGVLFHTWDGHEELFQDICLNFGVPLVVYSKGKVVNANEVLAAGPQPQPLMETVVITLMH 526
            +GVLF TWDGHEELFQD+C NFGVPLVVYSK K +NA EVLAAGPQPQP+METV+ITLMH
Sbjct: 1062 VGVLFQTWDGHEELFQDLCSNFGVPLVVYSKVKTINAKEVLAAGPQPQPIMETVLITLMH 1121

Query: 527  LALHSEKIELQAIFMICVVSAIDPCHRELVHAVLDNLSNELQYMTRTKYLEQLLGSLLFC 586
            +ALHSEK+EL+A+FMICVVSAIDPC RELV AVLDNLS ELQY TR KYLE+LLGSLLFC
Sbjct: 1122 VALHSEKVELEAVFMICVVSAIDPCQRELVCAVLDNLSKELQYTTRMKYLEELLGSLLFC 1181

Query: 587  WVACSVSLVALVETRHIFVPDAEPGQFLLYCCPWLLPALLLHESSSDLNWVAKVTCQPLT 646
            WVAC VSL ALVETRH+F PDA+PG FL YCC WLLPALLLH++S DLNWVAKVT QP+T
Sbjct: 1182 WVACGVSLPALVETRHLFAPDAQPGHFLQYCCTWLLPALLLHQNSPDLNWVAKVTGQPMT 1241

Query: 647  VLMKNHFSSIFSISMALHCTKKAGSERGTRVLQSSILHFGQISENERDKLIKKHMVSIVS 706
            VL+K HF+SIFSISMALHC+KK GSERGT VLQSSILHFGQISENERDKLIK+HMVSIVS
Sbjct: 1242 VLVKQHFASIFSISMALHCSKKPGSERGTHVLQSSILHFGQISENERDKLIKRHMVSIVS 1301

Query: 707  YILSLCSCSSEPVVPFFSKTAVSLAIQTIVDGFMDLDDNCTSAAVVDKINIFRPDRVFMF 766
             ILSLCSCSS+PVVPFFS+  +SL IQTIVDGF++ D + T+AAV DKINIFR DRVFMF
Sbjct: 1302 SILSLCSCSSDPVVPFFSRETMSLEIQTIVDGFLESDGSHTTAAVADKINIFRTDRVFMF 1361

Query: 767  LVEIHYKIAAASHCRHRCHRLAGIEVLISVLGQRVAFLSTSNYLFNLIGPLIGCLPLQDQ 826
            LVEIHYKI AASH RH+CHRL+GIEVLISVLG+RV  LSTSNYLFNLIGPLIG   LQDQ
Sbjct: 1362 LVEIHYKITAASHSRHKCHRLSGIEVLISVLGERVTALSTSNYLFNLIGPLIGYPALQDQ 1421

Query: 827  CCRILSALLLSFKNNVSADISSMLGEQLQFLVSKLVACCIPLKTEXXXXXXXXXXLAVLH 886
            CCRILSALLLSFK ++SADI+SMLGEQLQFLVSKLVACC P + +          L++LH
Sbjct: 1422 CCRILSALLLSFKKHLSADITSMLGEQLQFLVSKLVACCTPSQRKESCDSVVSGALSLLH 1481

Query: 887  MLTVDSDPSMYDYVKELEPFPVFQIFDEIRNFHEELCHTYSIRDHILKFVKKSCYLPPRL 946
            M T+DSDPSM+DYVKELEPFP  +IFD+IR FHEELCHTYSIRDHILKF K+SCYLPPRL
Sbjct: 1482 MFTLDSDPSMHDYVKELEPFPELKIFDKIRKFHEELCHTYSIRDHILKFAKRSCYLPPRL 1541

Query: 947  LLSSLQALHKKLLIGESFQREGRAESYFKDSHWHGDHELVHAVWTLVHICGSDDASGVRE 1006
            L SSLQALHKKLLI ESFQ  GR E  FKD +WHGDHE+ HAVWTLVH+ GSDDASGVRE
Sbjct: 1542 LSSSLQALHKKLLIEESFQIRGREEGQFKDKYWHGDHEIAHAVWTLVHMGGSDDASGVRE 1601

Query: 1007 LVSDFLCRVGVGNPHNVVFHLPGKSGHIRPSKTIDFSSAAENSSNVDSYXXXXXXXXXXX 1066
            LVSDF+ RVG G+PH+VVFHLPGKS HI PSK ID  S  E + N+D+            
Sbjct: 1602 LVSDFISRVGAGDPHSVVFHLPGKSTHIHPSKFIDNGSTGETNYNLDACISEELLVVLMK 1661

Query: 1067 XXXXXXXXXXVEIVDMASQTLRGLLSTERGQTSLLSFDSYQRSLIEVHSKGLNIEFVENF 1126
                      V+IVDMASQTLRG+LSTERGQ +LLSFDSYQRSL+++HSKG+NIE VENF
Sbjct: 1662 LLMKYLMDDSVKIVDMASQTLRGILSTERGQKALLSFDSYQRSLVKIHSKGVNIELVENF 1721

Query: 1127 LLDLDRKSKVEAISLEKSAVWVTDSKSFETWICPLVYSLIVYCNDVILRLCQDMVLCKAE 1186
            LLDLDRKSKV  ISLEKS VW+TD KSFETWICPLVYSLIVYCNDV+LRLCQDM+L KAE
Sbjct: 1722 LLDLDRKSKVAEISLEKSTVWLTDGKSFETWICPLVYSLIVYCNDVVLRLCQDMILLKAE 1781

Query: 1187 AAELLLPSIFVNIAARKDLEIDLHKLISVQLKEHIFTESNKLIKSIQVILNCLNELRVCH 1246
             AELLLPSIFVNIAARKDLEIDLHKLIS+QLKEHIF ESNK+IKSIQVILNCLNELRVC+
Sbjct: 1782 FAELLLPSIFVNIAARKDLEIDLHKLISLQLKEHIFVESNKMIKSIQVILNCLNELRVCY 1841

Query: 1247 VTERSSLVPSKHEIXXXXXXXXXXXXXXXXXXXAKARHSAVVSSALEKSPSSWDKVYWLS 1306
            V ERSSLVPS HE+                   A+ R SAV+SS L +SPSSW+KVYWLS
Sbjct: 1842 VMERSSLVPSMHEVSKNSRTPNYSSKSRSTPAKARQRQSAVISSGLSESPSSWEKVYWLS 1901

Query: 1307 IDYLLVAKSAVSCGSYFTSMMYVEHWCEEQFKTMTTGGPDFSHNEILPDHIEILVSAVTR 1366
            IDYL VAK+AVSCGSYFTS+MYVEHWCEEQFK MT GGPDFSHNE LPDHIE+LVSAVTR
Sbjct: 1902 IDYLPVAKAAVSCGSYFTSVMYVEHWCEEQFKAMTVGGPDFSHNETLPDHIEVLVSAVTR 1961

Query: 1367 INEPDSLYGILQSHKLTSQITMLEHEGNWGKALEFYDLQVQSGVSLRKVDSSRSLSLE 1424
            INEPDSLYGILQSHKLTSQ+   EHEGNWGKALE+YDLQVQSGV L K  SSRSLSLE
Sbjct: 1962 INEPDSLYGILQSHKLTSQVITFEHEGNWGKALEYYDLQVQSGVLLPKDSSSRSLSLE 2019