Miyakogusa Predicted Gene

Lj0g3v0182039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0182039.1 CUFF.11583.1
         (71 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g050540.1 | Cox19-like CHCH family protein | HC | chr7:168...   134   2e-32

>Medtr7g050540.1 | Cox19-like CHCH family protein | HC |
          chr7:16856014-16852371 | 20130731
          Length = 71

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/71 (92%), Positives = 69/71 (97%)

Query: 1  MASKDSSLPYPSAARISDSQCFPQYTASLKCLEEFHSDKSKCQEHFDVYKECKKKEREAR 60
          MASKDS+ PY SAARISDSQCFPQYTASLKCLEEF++DKSKCQEHFDVYKECKKKEREAR
Sbjct: 1  MASKDSTPPYQSAARISDSQCFPQYTASLKCLEEFNTDKSKCQEHFDVYKECKKKEREAR 60

Query: 61 LERNKTRSLFS 71
          LERNKTRSLFS
Sbjct: 61 LERNKTRSLFS 71