Miyakogusa Predicted Gene
- Lj0g3v0181969.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0181969.1 tr|G7IRR0|G7IRR0_MEDTR Protein binding protein
OS=Medicago truncatula GN=MTR_2g094130 PE=4
SV=1,73.84,0,ZF_RING_CH,Zinc finger, RING-CH-type; no description,Zinc
finger, RING/FYVE/PHD-type; RINGv,Zinc fin,CUFF.11577.1
(232 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g094130.1 | RING/U-box protein | HC | chr2:40144316-401482... 350 8e-97
Medtr2g094130.2 | RING/U-box protein | HC | chr2:40144316-401482... 343 7e-95
Medtr4g059540.1 | RING/U-box protein | HC | chr4:21933621-219287... 329 1e-90
Medtr3g081490.1 | zinc finger protein | HC | chr3:36898911-36894... 251 3e-67
Medtr1g064710.1 | RING/U-box protein | HC | chr1:28480942-284866... 251 3e-67
Medtr4g059540.2 | RING/U-box protein | HC | chr4:21933621-219287... 250 9e-67
Medtr1g064710.4 | RING/U-box protein | HC | chr1:28480942-284866... 205 2e-53
Medtr2g094130.3 | RING/U-box protein | HC | chr2:40144316-401482... 200 8e-52
Medtr2g094130.4 | RING/U-box protein | HC | chr2:40144316-401482... 200 9e-52
Medtr3g081490.4 | zinc finger protein | HC | chr3:36898911-36894... 192 3e-49
Medtr3g081490.2 | zinc finger protein | HC | chr3:36898911-36894... 191 4e-49
Medtr3g081490.3 | zinc finger protein | HC | chr3:36898911-36894... 191 4e-49
Medtr1g064710.7 | RING/U-box protein | HC | chr1:28480942-284866... 182 2e-46
Medtr2g020520.1 | zinc finger protein | HC | chr2:6842371-683628... 173 2e-43
Medtr2g020520.4 | zinc finger protein | HC | chr2:6841935-683628... 172 2e-43
Medtr2g020520.2 | zinc finger protein | HC | chr2:6842446-683628... 172 2e-43
Medtr2g020520.3 | zinc finger protein | HC | chr2:6842068-683628... 172 2e-43
Medtr1g064710.3 | RING/U-box protein | HC | chr1:28480942-284866... 152 3e-37
Medtr1g064710.2 | RING/U-box protein | HC | chr1:28480942-284866... 152 3e-37
Medtr1g064710.5 | RING/U-box protein | HC | chr1:28480942-284866... 152 3e-37
Medtr1g064710.6 | RING/U-box protein | HC | chr1:28480942-284866... 152 3e-37
Medtr4g459440.1 | RING/U-box protein, putative | HC | chr4:21874... 151 4e-37
Medtr4g059540.3 | RING/U-box protein | HC | chr4:21933621-219305... 131 5e-31
Medtr7g075740.1 | zinc finger protein | HC | chr7:28411195-28413... 126 2e-29
Medtr7g075700.1 | zinc finger protein | HC | chr7:28398841-28401... 113 2e-25
Medtr7g065920.1 | RING/FYVE/PHD zinc finger protein | HC | chr7:... 58 6e-09
Medtr3g069730.1 | RING/FYVE/PHD zinc finger protein | HC | chr3:... 58 7e-09
Medtr5g081560.1 | RING/FYVE/PHD zinc finger protein | HC | chr5:... 52 4e-07
Medtr8g086550.2 | RING/FYVE/PHD zinc finger protein | HC | chr8:... 52 6e-07
Medtr8g086550.1 | RING/FYVE/PHD zinc finger protein | HC | chr8:... 52 6e-07
Medtr4g086500.1 | RINGv domain protein | HC | chr4:33910665-3391... 52 6e-07
Medtr2g016520.1 | RING/FYVE/PHD zinc finger protein | HC | chr2:... 51 7e-07
Medtr3g069760.1 | RING-variant domain protein | LC | chr3:312467... 49 3e-06
>Medtr2g094130.1 | RING/U-box protein | HC | chr2:40144316-40148220
| 20130731
Length = 498
Score = 350 bits (897), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 167/235 (71%), Positives = 189/235 (80%), Gaps = 4/235 (1%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+++LCEGGET KMEC CKGELALAHQECAIKWFSI+GNKTCDVCKEEV+NLPVTLLRIQ+
Sbjct: 255 LIELCEGGETLKMECCCKGELALAHQECAIKWFSIRGNKTCDVCKEEVQNLPVTLLRIQS 314
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFSCVL 120
QTQN GAR QEDDFRVWQELPVLVIVSM+AYFCFLEQLLV KMGT+AIFISLPFSCVL
Sbjct: 315 TQTQNPGARPHQEDDFRVWQELPVLVIVSMLAYFCFLEQLLVGKMGTKAIFISLPFSCVL 374
Query: 121 GLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGFGVVM 180
GL+ FIW+YA+ QF LVV+FAH+FY LV KQAVL ILLASFAGFGV+M
Sbjct: 375 GLV-SAMTSTTMVRSKFIWLYASAQFLLVVLFAHVFYPLVGKQAVLAILLASFAGFGVMM 433
Query: 181 SGSSILAEFGRWRRRWRTLSEQQHRSQ---ATQGQHSQTINTSRSGLPNHSGTVV 232
SGSS++AE +WRRRW SEQQ R +G + Q + T +S LPNH+ T V
Sbjct: 434 SGSSVIAEILKWRRRWLAYSEQQRRDSQVMTQEGLYPQGVITPQSSLPNHNQTTV 488
>Medtr2g094130.2 | RING/U-box protein | HC | chr2:40144316-40148220
| 20130731
Length = 503
Score = 343 bits (881), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 167/240 (69%), Positives = 189/240 (78%), Gaps = 9/240 (3%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+++LCEGGET KMEC CKGELALAHQECAIKWFSI+GNKTCDVCKEEV+NLPVTLLRIQ+
Sbjct: 255 LIELCEGGETLKMECCCKGELALAHQECAIKWFSIRGNKTCDVCKEEVQNLPVTLLRIQS 314
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFSCVL 120
QTQN GAR QEDDFRVWQELPVLVIVSM+AYFCFLEQLLV KMGT+AIFISLPFSCVL
Sbjct: 315 TQTQNPGARPHQEDDFRVWQELPVLVIVSMLAYFCFLEQLLVGKMGTKAIFISLPFSCVL 374
Query: 121 GLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSL-----VSKQAVLTILLASFAG 175
GL+ FIW+YA+ QF LVV+FAH+FY L V KQAVL ILLASFAG
Sbjct: 375 GLV-SAMTSTTMVRSKFIWLYASAQFLLVVLFAHVFYPLFGNLQVGKQAVLAILLASFAG 433
Query: 176 FGVVMSGSSILAEFGRWRRRWRTLSEQQHRSQ---ATQGQHSQTINTSRSGLPNHSGTVV 232
FGV+MSGSS++AE +WRRRW SEQQ R +G + Q + T +S LPNH+ T V
Sbjct: 434 FGVMMSGSSVIAEILKWRRRWLAYSEQQRRDSQVMTQEGLYPQGVITPQSSLPNHNQTTV 493
>Medtr4g059540.1 | RING/U-box protein | HC | chr4:21933621-21928732
| 20130731
Length = 521
Score = 329 bits (844), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/235 (71%), Positives = 190/235 (80%), Gaps = 4/235 (1%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+V+LCEGGETFK+ECSCKGELALAH+ECAIKWFSIKGNKTCDVC++EV NLPVTLLRIQ+
Sbjct: 279 LVELCEGGETFKLECSCKGELALAHKECAIKWFSIKGNKTCDVCRKEVTNLPVTLLRIQS 338
Query: 61 VQTQNTG-ARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFSCV 119
V+ +N G +R+Q ED VWQE+PVLVIVSM+AYFCFLEQLLV KMGT AI ISLPFSCV
Sbjct: 339 VRNRNGGLSRAQLEDVNGVWQEVPVLVIVSMLAYFCFLEQLLVTKMGTGAIAISLPFSCV 398
Query: 120 LGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGFGVV 179
LGLL FIWIYA+ QFALVV+FAHIFYSLV QAVL+ILLA+FAGFGVV
Sbjct: 399 LGLL-SSMTSSTMVMSRFIWIYASFQFALVVLFAHIFYSLVHVQAVLSILLATFAGFGVV 457
Query: 180 MSGSSILAEFGRWRRRWRTLSEQQHRS-QATQ-GQHSQTINTSRSGLPNHSGTVV 232
MSGSS+L EF RWRRRW+ EQQH TQ GQ +T+ T RSG NH+ +VV
Sbjct: 458 MSGSSMLVEFFRWRRRWQASLEQQHGPLPMTQAGQQPRTVTTPRSGQSNHNQSVV 512
>Medtr3g081490.1 | zinc finger protein | HC | chr3:36898911-36894526
| 20130731
Length = 476
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 154/196 (78%), Gaps = 5/196 (2%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+V+L EGG+T +M+CSCKGELALAHQ+CA+KWFSIKGNKTCDVCK++VRNLPVTLL+I +
Sbjct: 244 LVELAEGGDTLRMDCSCKGELALAHQDCAVKWFSIKGNKTCDVCKQDVRNLPVTLLKISS 303
Query: 61 VQT--QNTGARSQQE--DDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPF 116
T ++T SQQ ++R+WQ++PVLV+VSM+AYFCFLE+LLV +G RA+ ISLPF
Sbjct: 304 PPTVVRHTLNASQQRAVTNYRIWQDVPVLVLVSMLAYFCFLEELLVSDLGPRALAISLPF 363
Query: 117 SCVLGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGF 176
SC+LGLL ++IW YA QFA V++FAHIFYS+++ A+ ++LLA+F GF
Sbjct: 364 SCILGLL-SSIIASTMVSRSYIWAYACFQFAFVILFAHIFYSILNVSAIFSVLLATFTGF 422
Query: 177 GVVMSGSSILAEFGRW 192
G+ +S +S+L E+ RW
Sbjct: 423 GIAISMNSLLMEYIRW 438
>Medtr1g064710.1 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 504
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 146/204 (71%), Gaps = 1/204 (0%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
M +L EG + FK+ECSCKGEL+LAH+ECA+KWF IKGN+TCDVCK+EV+NLPVTLLR+
Sbjct: 264 MAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCKQEVQNLPVTLLRLHQ 323
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFSCVL 120
Q + + +RVWQ+ P+LVIV+M+AYFCFLEQLLV MG+ AI +SLPFSC+L
Sbjct: 324 ANLQLSRGHLDETSQYRVWQDAPILVIVNMLAYFCFLEQLLVSDMGSSAIAMSLPFSCIL 383
Query: 121 GLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGFGVVM 180
GLL N +WIY +QF LVV+ H+F+ L AVL ILLA+FAGFGVVM
Sbjct: 384 GLL-ASMTATTMVRRNHVWIYGTMQFCLVVLCGHLFFKLTKMGAVLAILLATFAGFGVVM 442
Query: 181 SGSSILAEFGRWRRRWRTLSEQQH 204
G+ IL E +WRRRW QQ+
Sbjct: 443 CGTCILIEILKWRRRWLAQLNQQN 466
>Medtr4g059540.2 | RING/U-box protein | HC | chr4:21933621-21928750
| 20130731
Length = 468
Score = 250 bits (638), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 121/162 (74%), Positives = 137/162 (84%), Gaps = 2/162 (1%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+V+LCEGGETFK+ECSCKGELALAH+ECAIKWFSIKGNKTCDVC++EV NLPVTLLRIQ+
Sbjct: 279 LVELCEGGETFKLECSCKGELALAHKECAIKWFSIKGNKTCDVCRKEVTNLPVTLLRIQS 338
Query: 61 VQTQNTG-ARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFSCV 119
V+ +N G +R+Q ED VWQE+PVLVIVSM+AYFCFLEQLLV KMGT AI ISLPFSCV
Sbjct: 339 VRNRNGGLSRAQLEDVNGVWQEVPVLVIVSMLAYFCFLEQLLVTKMGTGAIAISLPFSCV 398
Query: 120 LGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVS 161
LGLL FIWIYA+ QFALVV+FAHIFYSLV+
Sbjct: 399 LGLL-SSMTSSTMVMSRFIWIYASFQFALVVLFAHIFYSLVT 439
>Medtr1g064710.4 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 432
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
M +L EG + FK+ECSCKGEL+LAH+ECA+KWF IKGN+TCDVCK+EV+NLPVTLLR+
Sbjct: 264 MAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCKQEVQNLPVTLLRLHQ 323
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFSCVL 120
Q + + +RVWQ+ P+LVIV+M+AYFCFLEQLLV MG+ AI +SLPFSC+L
Sbjct: 324 ANLQLSRGHLDETSQYRVWQDAPILVIVNMLAYFCFLEQLLVSDMGSSAIAMSLPFSCIL 383
Query: 121 GLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLV 160
GLL N +WIY +QF LVV+ H+F+ LV
Sbjct: 384 GLL-ASMTATTMVRRNHVWIYGTMQFCLVVLCGHLFFKLV 422
>Medtr2g094130.3 | RING/U-box protein | HC | chr2:40144316-40148220
| 20130731
Length = 438
Score = 200 bits (509), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 90/103 (87%), Positives = 97/103 (94%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+++LCEGGET KMEC CKGELALAHQECAIKWFSI+GNKTCDVCKEEV+NLPVTLLRIQ+
Sbjct: 255 LIELCEGGETLKMECCCKGELALAHQECAIKWFSIRGNKTCDVCKEEVQNLPVTLLRIQS 314
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVR 103
QTQN GAR QEDDFRVWQELPVLVIVSM+AYFCFLEQLLVR
Sbjct: 315 TQTQNPGARPHQEDDFRVWQELPVLVIVSMLAYFCFLEQLLVR 357
>Medtr2g094130.4 | RING/U-box protein | HC | chr2:40144316-40148220
| 20130731
Length = 443
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 90/103 (87%), Positives = 97/103 (94%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+++LCEGGET KMEC CKGELALAHQECAIKWFSI+GNKTCDVCKEEV+NLPVTLLRIQ+
Sbjct: 255 LIELCEGGETLKMECCCKGELALAHQECAIKWFSIRGNKTCDVCKEEVQNLPVTLLRIQS 314
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVR 103
QTQN GAR QEDDFRVWQELPVLVIVSM+AYFCFLEQLLVR
Sbjct: 315 TQTQNPGARPHQEDDFRVWQELPVLVIVSMLAYFCFLEQLLVR 357
>Medtr3g081490.4 | zinc finger protein | HC | chr3:36898911-36894526
| 20130731
Length = 380
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 109/127 (85%), Gaps = 4/127 (3%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+V+L EGG+T +M+CSCKGELALAHQ+CA+KWFSIKGNKTCDVCK++VRNLPVTLL+I +
Sbjct: 244 LVELAEGGDTLRMDCSCKGELALAHQDCAVKWFSIKGNKTCDVCKQDVRNLPVTLLKISS 303
Query: 61 VQT--QNTGARSQQE--DDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPF 116
T ++T SQQ ++R+WQ++PVLV+VSM+AYFCFLE+LLV +G RA+ ISLPF
Sbjct: 304 PPTVVRHTLNASQQRAVTNYRIWQDVPVLVLVSMLAYFCFLEELLVSDLGPRALAISLPF 363
Query: 117 SCVLGLL 123
SC+LGLL
Sbjct: 364 SCILGLL 370
>Medtr3g081490.2 | zinc finger protein | HC | chr3:36898911-36894532
| 20130731
Length = 387
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 109/127 (85%), Gaps = 4/127 (3%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+V+L EGG+T +M+CSCKGELALAHQ+CA+KWFSIKGNKTCDVCK++VRNLPVTLL+I +
Sbjct: 244 LVELAEGGDTLRMDCSCKGELALAHQDCAVKWFSIKGNKTCDVCKQDVRNLPVTLLKISS 303
Query: 61 VQT--QNTGARSQQE--DDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPF 116
T ++T SQQ ++R+WQ++PVLV+VSM+AYFCFLE+LLV +G RA+ ISLPF
Sbjct: 304 PPTVVRHTLNASQQRAVTNYRIWQDVPVLVLVSMLAYFCFLEELLVSDLGPRALAISLPF 363
Query: 117 SCVLGLL 123
SC+LGLL
Sbjct: 364 SCILGLL 370
>Medtr3g081490.3 | zinc finger protein | HC | chr3:36898911-36894532
| 20130731
Length = 387
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 109/127 (85%), Gaps = 4/127 (3%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+V+L EGG+T +M+CSCKGELALAHQ+CA+KWFSIKGNKTCDVCK++VRNLPVTLL+I +
Sbjct: 244 LVELAEGGDTLRMDCSCKGELALAHQDCAVKWFSIKGNKTCDVCKQDVRNLPVTLLKISS 303
Query: 61 VQT--QNTGARSQQE--DDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPF 116
T ++T SQQ ++R+WQ++PVLV+VSM+AYFCFLE+LLV +G RA+ ISLPF
Sbjct: 304 PPTVVRHTLNASQQRAVTNYRIWQDVPVLVLVSMLAYFCFLEELLVSDLGPRALAISLPF 363
Query: 117 SCVLGLL 123
SC+LGLL
Sbjct: 364 SCILGLL 370
>Medtr1g064710.7 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 396
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 99/123 (80%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
M +L EG + FK+ECSCKGEL+LAH+ECA+KWF IKGN+TCDVCK+EV+NLPVTLLR+
Sbjct: 264 MAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCKQEVQNLPVTLLRLHQ 323
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFSCVL 120
Q + + +RVWQ+ P+LVIV+M+AYFCFLEQLLV MG+ AI +SLPFSC+L
Sbjct: 324 ANLQLSRGHLDETSQYRVWQDAPILVIVNMLAYFCFLEQLLVSDMGSSAIAMSLPFSCIL 383
Query: 121 GLL 123
GLL
Sbjct: 384 GLL 386
>Medtr2g020520.1 | zinc finger protein | HC | chr2:6842371-6836281 |
20130731
Length = 424
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 122/196 (62%), Gaps = 5/196 (2%)
Query: 2 VDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRI-QN 60
+D C+ G TFKMEC CKG+L L H+EC IKW + KG C++C + V+NLPVTLLR+ +
Sbjct: 220 LDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEICGKVVQNLPVTLLRVSSS 279
Query: 61 VQTQNTGARSQQE---DDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFS 117
VQ +N + Q + WQ+ VLV++S I YF FLEQLL+ + T+AI +S PFS
Sbjct: 280 VQRRNRPLQDHQNFNSETISAWQDFVVLVLISTICYFFFLEQLLLPDLKTQAIIMSAPFS 339
Query: 118 CVLGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGFG 177
LGLL +IW YAA++FALV I H+FY+++ + +ILL++ GFG
Sbjct: 340 FTLGLL-GSVFAIVLAIKEYIWTYAALEFALVAITVHLFYTMLHLAPIYSILLSTVFGFG 398
Query: 178 VVMSGSSILAEFGRWR 193
+ M + I ++ WR
Sbjct: 399 IAMGINYIYIQYVNWR 414
>Medtr2g020520.4 | zinc finger protein | HC | chr2:6841935-6836281 |
20130731
Length = 423
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 122/196 (62%), Gaps = 5/196 (2%)
Query: 2 VDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRI-QN 60
+D C+ G TFKMEC CKG+L L H+EC IKW + KG C++C + V+NLPVTLLR+ +
Sbjct: 219 LDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEICGKVVQNLPVTLLRVSSS 278
Query: 61 VQTQNTGARSQQE---DDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFS 117
VQ +N + Q + WQ+ VLV++S I YF FLEQLL+ + T+AI +S PFS
Sbjct: 279 VQRRNRPLQDHQNFNSETISAWQDFVVLVLISTICYFFFLEQLLLPDLKTQAIIMSAPFS 338
Query: 118 CVLGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGFG 177
LGLL +IW YAA++FALV I H+FY+++ + +ILL++ GFG
Sbjct: 339 FTLGLL-GSVFAIVLAIKEYIWTYAALEFALVAITVHLFYTMLHLAPIYSILLSTVFGFG 397
Query: 178 VVMSGSSILAEFGRWR 193
+ M + I ++ WR
Sbjct: 398 IAMGINYIYIQYVNWR 413
>Medtr2g020520.2 | zinc finger protein | HC | chr2:6842446-6836281 |
20130731
Length = 315
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 122/196 (62%), Gaps = 5/196 (2%)
Query: 2 VDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRI-QN 60
+D C+ G TFKMEC CKG+L L H+EC IKW + KG C++C + V+NLPVTLLR+ +
Sbjct: 111 LDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEICGKVVQNLPVTLLRVSSS 170
Query: 61 VQTQNTGARSQQE---DDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFS 117
VQ +N + Q + WQ+ VLV++S I YF FLEQLL+ + T+AI +S PFS
Sbjct: 171 VQRRNRPLQDHQNFNSETISAWQDFVVLVLISTICYFFFLEQLLLPDLKTQAIIMSAPFS 230
Query: 118 CVLGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGFG 177
LGLL +IW YAA++FALV I H+FY+++ + +ILL++ GFG
Sbjct: 231 FTLGLL-GSVFAIVLAIKEYIWTYAALEFALVAITVHLFYTMLHLAPIYSILLSTVFGFG 289
Query: 178 VVMSGSSILAEFGRWR 193
+ M + I ++ WR
Sbjct: 290 IAMGINYIYIQYVNWR 305
>Medtr2g020520.3 | zinc finger protein | HC | chr2:6842068-6836281 |
20130731
Length = 315
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 122/196 (62%), Gaps = 5/196 (2%)
Query: 2 VDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRI-QN 60
+D C+ G TFKMEC CKG+L L H+EC IKW + KG C++C + V+NLPVTLLR+ +
Sbjct: 111 LDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEICGKVVQNLPVTLLRVSSS 170
Query: 61 VQTQNTGARSQQE---DDFRVWQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFS 117
VQ +N + Q + WQ+ VLV++S I YF FLEQLL+ + T+AI +S PFS
Sbjct: 171 VQRRNRPLQDHQNFNSETISAWQDFVVLVLISTICYFFFLEQLLLPDLKTQAIIMSAPFS 230
Query: 118 CVLGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGFG 177
LGLL +IW YAA++FALV I H+FY+++ + +ILL++ GFG
Sbjct: 231 FTLGLL-GSVFAIVLAIKEYIWTYAALEFALVAITVHLFYTMLHLAPIYSILLSTVFGFG 289
Query: 178 VVMSGSSILAEFGRWR 193
+ M + I ++ WR
Sbjct: 290 IAMGINYIYIQYVNWR 305
>Medtr1g064710.3 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 82/102 (80%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
M +L EG + FK+ECSCKGEL+LAH+ECA+KWF IKGN+TCDVCK+EV+NLPVTLLR+
Sbjct: 264 MAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCKQEVQNLPVTLLRLHQ 323
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLV 102
Q + + +RVWQ+ P+LVIV+M+AYFCFLEQLLV
Sbjct: 324 ANLQLSRGHLDETSQYRVWQDAPILVIVNMLAYFCFLEQLLV 365
>Medtr1g064710.2 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 82/102 (80%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
M +L EG + FK+ECSCKGEL+LAH+ECA+KWF IKGN+TCDVCK+EV+NLPVTLLR+
Sbjct: 264 MAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCKQEVQNLPVTLLRLHQ 323
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLV 102
Q + + +RVWQ+ P+LVIV+M+AYFCFLEQLLV
Sbjct: 324 ANLQLSRGHLDETSQYRVWQDAPILVIVNMLAYFCFLEQLLV 365
>Medtr1g064710.5 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 82/102 (80%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
M +L EG + FK+ECSCKGEL+LAH+ECA+KWF IKGN+TCDVCK+EV+NLPVTLLR+
Sbjct: 264 MAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCKQEVQNLPVTLLRLHQ 323
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLV 102
Q + + +RVWQ+ P+LVIV+M+AYFCFLEQLLV
Sbjct: 324 ANLQLSRGHLDETSQYRVWQDAPILVIVNMLAYFCFLEQLLV 365
>Medtr1g064710.6 | RING/U-box protein | HC | chr1:28480942-28486635
| 20130731
Length = 381
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 82/102 (80%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
M +L EG + FK+ECSCKGEL+LAH+ECA+KWF IKGN+TCDVCK+EV+NLPVTLLR+
Sbjct: 264 MAELGEGADNFKLECSCKGELSLAHKECAVKWFGIKGNRTCDVCKQEVQNLPVTLLRLHQ 323
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLV 102
Q + + +RVWQ+ P+LVIV+M+AYFCFLEQLLV
Sbjct: 324 ANLQLSRGHLDETSQYRVWQDAPILVIVNMLAYFCFLEQLLV 365
>Medtr4g459440.1 | RING/U-box protein, putative | HC |
chr4:21874716-21873646 | 20130731
Length = 138
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 94/130 (72%), Gaps = 3/130 (2%)
Query: 105 MGTRAIFISLPFSCVLGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQA 164
MGT AI ISLPFSCVLGLL FIWIYA+ QFALVV+FAHIFYSLV QA
Sbjct: 1 MGTGAIAISLPFSCVLGLLSSMTSSTMVMS-RFIWIYASFQFALVVLFAHIFYSLVHVQA 59
Query: 165 VLTILLASFAGFGVVMSGSSILAEFGRWRRRWRTLSEQQHRS-QATQ-GQHSQTINTSRS 222
VL+ILLA+FAGFGVVMSGSS+L EF RWRRRW+ EQQH TQ GQ +T+ T RS
Sbjct: 60 VLSILLATFAGFGVVMSGSSMLVEFFRWRRRWQASLEQQHGPLPMTQAGQQPRTVTTPRS 119
Query: 223 GLPNHSGTVV 232
G NH+ +VV
Sbjct: 120 GQSNHNQSVV 129
>Medtr4g059540.3 | RING/U-box protein | HC | chr4:21933621-21930587
| 20130731
Length = 372
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 70/75 (93%), Gaps = 1/75 (1%)
Query: 1 MVDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQN 60
+V+LCEGGETFK+ECSCKGELALAH+ECAIKWFSIKGNKTCDVC++EV NLPVTLLRIQ+
Sbjct: 279 LVELCEGGETFKLECSCKGELALAHKECAIKWFSIKGNKTCDVCRKEVTNLPVTLLRIQS 338
Query: 61 VQTQNTG-ARSQQED 74
V+ +N G +R+Q ED
Sbjct: 339 VRNRNGGLSRAQLED 353
>Medtr7g075740.1 | zinc finger protein | HC | chr7:28411195-28413523
| 20130731
Length = 240
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 12/181 (6%)
Query: 2 VDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRIQNV 61
+D+ + FKMECSCKG+ L H+EC IKWFS K NK CDVC EV+NLP L+
Sbjct: 47 LDVFDERNIFKMECSCKGDQRLVHEECLIKWFSTKRNKKCDVCLAEVQNLPANLVH---- 102
Query: 62 QTQNTGARSQQEDDFRV--WQELPVLVIVSMIAYFCFLEQLLVRKMGTRAIFISLPFSCV 119
RS Q + R+ WQ VLV++S + YF F+ LL R + TR I I+ S
Sbjct: 103 -----ECRSVQPRNIRLSAWQNFVVLVLISTLWYFHFIVDLLYRDLKTRGIIIAAAVSFT 157
Query: 120 LGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAHIFYSLVSKQAVLTILLASFAGFGVV 179
L LL ++W+YA ++F LV +FY+L+ + +I L+S GFG+
Sbjct: 158 LSLL-ASVFAFFLAIREYMWLYALLEFGLVDATFLLFYTLLHLAPIYSIPLSSVVGFGIA 216
Query: 180 M 180
M
Sbjct: 217 M 217
>Medtr7g075700.1 | zinc finger protein | HC | chr7:28398841-28401540
| 20130731
Length = 258
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 36/206 (17%)
Query: 2 VDLCEGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLPVTLLRI-QN 60
+D+ + F+MECSCKG+ L H+EC IKWFS KGNK CDVC EV+NLP L+ + ++
Sbjct: 39 LDVFDERNIFQMECSCKGDQRLVHEECLIKWFSTKGNKKCDVCLTEVQNLPANLVHVSRS 98
Query: 61 VQTQNTGARSQQEDDFRVWQELPVLVIVSMIAYFCFLEQLLVR----------------- 103
VQ +N WQ+ VLV++S I YF FL LL+
Sbjct: 99 VQLRNI--------QLSAWQKFVVLVLISTIGYFNFLVDLLLEGNLAFHQKLLHSSVFER 150
Query: 104 ---------KMGTRAIFISLPFSCVLGLLXXXXXXXXXXXXNFIWIYAAVQFALVVIFAH 154
TR+I I S L LL ++ +YA ++F LV +
Sbjct: 151 RHPVENECPDPKTRSIIIPAAVSFTLSLL-ASVFAFFLAIREYMALYALLEFGLVDVTLR 209
Query: 155 IFYSLVSKQAVLTILLASFAGFGVVM 180
+FY+L+ + ++ L+S GFG+ M
Sbjct: 210 LFYTLLHLAPIYSVPLSSVLGFGIAM 235
>Medtr7g065920.1 | RING/FYVE/PHD zinc finger protein | HC |
chr7:23950286-23946340 | 20130731
Length = 235
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 6 EGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNL--PVTLLRIQNVQT 63
E G ++ CSCK +LA AH+ CA WF IKGN+TC++C RN+ P L +
Sbjct: 124 ESGPPIELGCSCKEDLAAAHKNCAEAWFKIKGNRTCEICHSIARNVYSPNEDLTEHVSEN 183
Query: 64 QNTGARS 70
N A S
Sbjct: 184 NNATASS 190
>Medtr3g069730.1 | RING/FYVE/PHD zinc finger protein | HC |
chr3:31222536-31219118 | 20130731
Length = 217
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 6 EGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNL 51
E G ++ CSCK +LA AH++CA WF +KGNKTC++C RN+
Sbjct: 109 ESGIPIELGCSCKDDLAAAHKQCAEAWFKVKGNKTCEICGSIARNV 154
>Medtr5g081560.1 | RING/FYVE/PHD zinc finger protein | HC |
chr5:34934468-34931762 | 20130731
Length = 211
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 6 EGGETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNL 51
E G ++ C CK +LA AH+ CA WF IKGNKTC++C N+
Sbjct: 101 ESGIPMELGCFCKNDLAAAHKHCAEAWFKIKGNKTCEICGSIAHNV 146
>Medtr8g086550.2 | RING/FYVE/PHD zinc finger protein | HC |
chr8:35906780-35909962 | 20130731
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 15 CSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNL 51
C+CK EL +AH CA WF IKGN+ C++C E +N+
Sbjct: 214 CACKDELGIAHSHCAEAWFKIKGNRLCEICGETAKNV 250
>Medtr8g086550.1 | RING/FYVE/PHD zinc finger protein | HC |
chr8:35906799-35909962 | 20130731
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 15 CSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNL 51
C+CK EL +AH CA WF IKGN+ C++C E +N+
Sbjct: 214 CACKDELGIAHSHCAEAWFKIKGNRLCEICGETAKNV 250
>Medtr4g086500.1 | RINGv domain protein | HC |
chr4:33910665-33912893 | 20130731
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 15 CSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNL 51
C+CK EL +AH CA WF IKGN+ C++C E +N+
Sbjct: 214 CACKDELGIAHSHCAEAWFKIKGNRLCEICGETAKNV 250
>Medtr2g016520.1 | RING/FYVE/PHD zinc finger protein | HC |
chr2:5072077-5075083 | 20130731
Length = 283
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 8 GETFKMECSCKGELALAHQECAIKWFSIKGNKTCDVCKEEVRNLP 52
G+ ++ C+CK EL +AH CA WF +KGN+ C++C E +N+
Sbjct: 180 GDLIQLGCACKDELGIAHVHCAEVWFKLKGNRLCEICGETAKNVS 224
>Medtr3g069760.1 | RING-variant domain protein | LC |
chr3:31246719-31244298 | 20130731
Length = 196
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 11 FKMECSCKGELALAHQECAIKWFSIKGNKTCDVC 44
++ CSCK +++ AH+ CA +WF IKGNKTC++C
Sbjct: 95 IELGCSCKDDMSTAHKLCAEEWFRIKGNKTCEIC 128