Miyakogusa Predicted Gene

Lj0g3v0181699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181699.1 Non Characterized Hit- tr|K4C5K6|K4C5K6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.93,0.000000000000006,seg,NULL,CUFF.11550.1
         (187 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g071970.1 | DUF399 family protein | HC | chr3:32330169-323...    92   4e-19

>Medtr3g071970.1 | DUF399 family protein | HC |
           chr3:32330169-32336859 | 20130731
          Length = 780

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 86/190 (45%), Gaps = 19/190 (10%)

Query: 1   MKPHTQASFATGPPHVTYFRR---ARASPSKTHLPLPHHEVRRVWTAKRRRVSLSVRHPN 57
           MKP+TQASF+TGPPHVTYF R   +RA PS THLP P+ ++R+  TAKRRRV+LS     
Sbjct: 1   MKPNTQASFSTGPPHVTYFHRVTVSRAVPSHTHLPPPNQKLRQFRTAKRRRVNLS----- 55

Query: 58  RVVAAWKPEHSDRSEREDSVEPTTDXXXXXXXXXGVLVXXXXXXXXXXXXXXXXXXXXXX 117
            + AA K EH D +   + VE  T+         GVL+                      
Sbjct: 56  -ITAAKKTEHHDGN---NGVE-RTECSPARSNRRGVLMAPFLAAGASFLLSAATTRAAEE 110

Query: 118 XXXXXXXXXXXXXXXLTXXXXXXXXXXXXXXXXXTSRIYDATAIGEPLAIGKEKGKVWEK 177
                                              + I +  AIG      KEKGKVWEK
Sbjct: 111 EKLKENTAPVEATVVKPEEVKKIEEEVITSRIYDATAIGEPLAIG------KEKGKVWEK 164

Query: 178 LMNSRVVYWG 187
           LMN+RVVY G
Sbjct: 165 LMNARVVYLG 174