Miyakogusa Predicted Gene

Lj0g3v0181179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181179.1 Non Characterized Hit- tr|Q8RX24|Q8RX24_ARATH
Putative uncharacterized protein At4g02480
OS=Arabidop,41.07,0.00000004, ,CUFF.11509.1
         (127 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g089100.1 | P-loop nucleoside triphosphate hydrolase super...   189   7e-49
Medtr3g089100.2 | P-loop nucleoside triphosphate hydrolase super...   189   8e-49
Medtr3g089100.3 | P-loop nucleoside triphosphate hydrolase super...   188   9e-49
Medtr1g088750.1 | P-loop nucleoside triphosphate hydrolase super...    55   2e-08
Medtr1g088750.2 | P-loop nucleoside triphosphate hydrolase super...    55   2e-08

>Medtr3g089100.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein, putative | HC |
           chr3:33915623-33929519 | 20130731
          Length = 1236

 Score =  189 bits (479), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 103/127 (81%), Positives = 106/127 (83%), Gaps = 2/127 (1%)

Query: 1   MLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSI 60
           ML KALAKYFGAKLLIFDS LLLGGLSSKEAELLKDG NAEK CS  KQSPTATD+ +S 
Sbjct: 484 MLVKALAKYFGAKLLIFDSQLLLGGLSSKEAELLKDGFNAEKSCSCPKQSPTATDMAKST 543

Query: 61  DPSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTG-FKLGDRVKYSCSSSGVL 119
           DP ASETDTPSSSN PTP GLESQ KLETD+ PSTSGT K   FKLGDRVKYS SSS  L
Sbjct: 544 DPPASETDTPSSSNVPTPLGLESQAKLETDSVPSTSGTAKNCLFKLGDRVKYS-SSSACL 602

Query: 120 YQTSSPR 126
           YQTSS R
Sbjct: 603 YQTSSSR 609


>Medtr3g089100.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein, putative | HC |
           chr3:33915693-33929519 | 20130731
          Length = 1207

 Score =  189 bits (479), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 103/127 (81%), Positives = 106/127 (83%), Gaps = 2/127 (1%)

Query: 1   MLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSI 60
           ML KALAKYFGAKLLIFDS LLLGGLSSKEAELLKDG NAEK CS  KQSPTATD+ +S 
Sbjct: 455 MLVKALAKYFGAKLLIFDSQLLLGGLSSKEAELLKDGFNAEKSCSCPKQSPTATDMAKST 514

Query: 61  DPSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTG-FKLGDRVKYSCSSSGVL 119
           DP ASETDTPSSSN PTP GLESQ KLETD+ PSTSGT K   FKLGDRVKYS SSS  L
Sbjct: 515 DPPASETDTPSSSNVPTPLGLESQAKLETDSVPSTSGTAKNCLFKLGDRVKYS-SSSACL 573

Query: 120 YQTSSPR 126
           YQTSS R
Sbjct: 574 YQTSSSR 580


>Medtr3g089100.3 | P-loop nucleoside triphosphate hydrolase
           superfamily protein, putative | HC |
           chr3:33915623-33929666 | 20130731
          Length = 1202

 Score =  188 bits (478), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 103/127 (81%), Positives = 106/127 (83%), Gaps = 2/127 (1%)

Query: 1   MLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSI 60
           ML KALAKYFGAKLLIFDS LLLGGLSSKEAELLKDG NAEK CS  KQSPTATD+ +S 
Sbjct: 450 MLVKALAKYFGAKLLIFDSQLLLGGLSSKEAELLKDGFNAEKSCSCPKQSPTATDMAKST 509

Query: 61  DPSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTG-FKLGDRVKYSCSSSGVL 119
           DP ASETDTPSSSN PTP GLESQ KLETD+ PSTSGT K   FKLGDRVKYS SSS  L
Sbjct: 510 DPPASETDTPSSSNVPTPLGLESQAKLETDSVPSTSGTAKNCLFKLGDRVKYS-SSSACL 568

Query: 120 YQTSSPR 126
           YQTSS R
Sbjct: 569 YQTSSSR 575


>Medtr1g088750.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr1:39724490-39713166 |
           20130731
          Length = 1243

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 8/110 (7%)

Query: 2   LAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSID 61
           L+KALAK+FGA+LLI DS  L GG  SKE +  K+    E+P   +K+S  A+ +     
Sbjct: 497 LSKALAKHFGARLLIVDSLSLPGGTPSKEVDSAKESSKPERPAVLAKRSGQASTLHHKKP 556

Query: 62  PSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTGFKLGDRVKY 111
            S+ + +    S       L SQ  L+ +   ST+ +  T  K GDRVK+
Sbjct: 557 TSSVDAEIIGGST------LSSQAMLKQE--VSTASSKGTALKKGDRVKF 598


>Medtr1g088750.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr1:39724490-39713233 |
           20130731
          Length = 1194

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 8/110 (7%)

Query: 2   LAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSID 61
           L+KALAK+FGA+LLI DS  L GG  SKE +  K+    E+P   +K+S  A+ +     
Sbjct: 448 LSKALAKHFGARLLIVDSLSLPGGTPSKEVDSAKESSKPERPAVLAKRSGQASTLHHKKP 507

Query: 62  PSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTGFKLGDRVKY 111
            S+ + +    S       L SQ  L+ +   ST+ +  T  K GDRVK+
Sbjct: 508 TSSVDAEIIGGST------LSSQAMLKQE--VSTASSKGTALKKGDRVKF 549