Miyakogusa Predicted Gene

Lj0g3v0181109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181109.1 tr|B9MTC1|B9MTC1_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_916069
PE=3,53.85,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; DUF588,Uncharacterised protein family UPF,CUFF.11506.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g058950.1 | CASP-like protein | HC | chr4:21730613-2173633...   221   3e-58
Medtr4g058950.2 | CASP-like protein | HC | chr4:21730639-2173631...   221   3e-58
Medtr1g073950.1 | CASP-like protein | HC | chr1:32866628-3286899...   120   6e-28
Medtr4g021340.1 | CASP-like protein | HC | chr4:6920412-6915192 ...   117   5e-27
Medtr1g074040.1 | CASP-like protein | HC | chr1:32902208-3290332...    94   1e-19
Medtr8g078830.1 | CASP-like protein | HC | chr8:33585211-3358302...    85   4e-17
Medtr1g043450.1 | CASP-like protein | HC | chr1:16325008-1632211...    78   4e-15
Medtr4g068780.1 | CASP-like protein | HC | chr4:25795138-2579685...    69   3e-12
Medtr5g018680.1 | CASP-like protein | HC | chr5:6964676-6966875 ...    64   6e-11
Medtr4g113590.1 | CASP-like protein | HC | chr4:46708021-4670753...    49   2e-06

>Medtr4g058950.1 | CASP-like protein | HC | chr4:21730613-21736333 |
           20130731
          Length = 185

 Score =  221 bits (563), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/191 (58%), Positives = 135/191 (70%), Gaps = 15/191 (7%)

Query: 1   MSMVRPSVHPVEAPPLTDHAT---------PIHTMKDIQGMPGTXXXXXXXXXXXXRFLQ 51
           M++   S+HPVE  P TD            P+  MKDIQGMPGT            R  Q
Sbjct: 1   MNVSHASIHPVEEVPTTDGGVAVAEQNVNVPMVRMKDIQGMPGTIGGLAL------RVSQ 54

Query: 52  FSFALVSLSVMATTSDFPSVTAFRYLVAAVSLQSLWSLSLAIADIYAILVRRGFRNPRIV 111
           F FA  +LSVMA+TSDFPSVTAF +LVAA  LQ+LWS++LAI D+YAILVRR  +N R+V
Sbjct: 55  FVFAAAALSVMASTSDFPSVTAFCFLVAAAGLQTLWSIALAITDVYAILVRRSLQNYRLV 114

Query: 112 SLFSVGDGITSTLTFSAACASAGITVLIGNDLNECAQNHCSRFETATAMAFMSWFAASPS 171
           S F++GDG+TSTL F+AACASAGITVLI NDL  C +NHC +FETAT MAF+ WF   PS
Sbjct: 115 SSFTIGDGVTSTLIFAAACASAGITVLIDNDLGNCNENHCVQFETATGMAFICWFTTVPS 174

Query: 172 FILNFWTLASK 182
           F+LNFW+LAS+
Sbjct: 175 FLLNFWSLASR 185


>Medtr4g058950.2 | CASP-like protein | HC | chr4:21730639-21736310 |
           20130731
          Length = 185

 Score =  221 bits (563), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/191 (58%), Positives = 135/191 (70%), Gaps = 15/191 (7%)

Query: 1   MSMVRPSVHPVEAPPLTDHAT---------PIHTMKDIQGMPGTXXXXXXXXXXXXRFLQ 51
           M++   S+HPVE  P TD            P+  MKDIQGMPGT            R  Q
Sbjct: 1   MNVSHASIHPVEEVPTTDGGVAVAEQNVNVPMVRMKDIQGMPGTIGGLAL------RVSQ 54

Query: 52  FSFALVSLSVMATTSDFPSVTAFRYLVAAVSLQSLWSLSLAIADIYAILVRRGFRNPRIV 111
           F FA  +LSVMA+TSDFPSVTAF +LVAA  LQ+LWS++LAI D+YAILVRR  +N R+V
Sbjct: 55  FVFAAAALSVMASTSDFPSVTAFCFLVAAAGLQTLWSIALAITDVYAILVRRSLQNYRLV 114

Query: 112 SLFSVGDGITSTLTFSAACASAGITVLIGNDLNECAQNHCSRFETATAMAFMSWFAASPS 171
           S F++GDG+TSTL F+AACASAGITVLI NDL  C +NHC +FETAT MAF+ WF   PS
Sbjct: 115 SSFTIGDGVTSTLIFAAACASAGITVLIDNDLGNCNENHCVQFETATGMAFICWFTTVPS 174

Query: 172 FILNFWTLASK 182
           F+LNFW+LAS+
Sbjct: 175 FLLNFWSLASR 185


>Medtr1g073950.1 | CASP-like protein | HC | chr1:32866628-32868997 |
           20130731
          Length = 152

 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 93/157 (59%), Gaps = 7/157 (4%)

Query: 26  MKDIQGMPGTXXXXXXXXXXXXRFLQFSFALVSLSVMATTSDFPSVTAFRYLVAAVSLQS 85
           MKD  G PGT            R  QF FA  S++ M ++S F + TAF YL+AA+ LQ+
Sbjct: 1   MKDFPGTPGTVLGLIL------RLSQFIFAAGSIAFMVSSSSFFNFTAFCYLIAAMGLQA 54

Query: 86  LWSLSLAIADIYAILVRRGFRNPRIVSLFSVGDGITSTLTFSAACASAGITVLIGNDLNE 145
           +WS  LA+ D YA++ R+   NP +V L+ VGD  TSTL+ +AAC+SAGITVL  NDL  
Sbjct: 55  IWSFVLALMDAYAVVRRKVLHNPVLVCLYLVGDWATSTLSLAAACSSAGITVLFFNDLRH 114

Query: 146 CA-QNHCSRFETATAMAFMSWFAASPSFILNFWTLAS 181
           C     C  ++ +   AF+SW   S S ++  W LA+
Sbjct: 115 CYFGEECRNYQLSVVCAFLSWIPISISSLIMLWLLAA 151


>Medtr4g021340.1 | CASP-like protein | HC | chr4:6920412-6915192 |
           20130731
          Length = 155

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 9/159 (5%)

Query: 26  MKDIQGMPGTXXXXXXXXXXXXRFLQFSFALVSLSVMATTSDFPSVTAFRYLVAAVSLQS 85
           M+ + G PGT            R  Q +F   S+SVM T+  F + TAF YL A++ LQ 
Sbjct: 2   MQRLLGGPGTVSGFLL------RLGQCAFGAASISVMVTSFGFSTYTAFCYLTASMGLQV 55

Query: 86  LWSLSLAIADIYAILVRRGFRNPRIVSLFSVGDGITSTLTFSAACASAGITVLIGNDLNE 145
           LWS  LA  DIYA+  +R  +NP +VSLF VGD +T+ L+ +AAC+SAG+ VL   D++ 
Sbjct: 56  LWSFGLACLDIYALRRKRDLQNPILVSLFVVGDWVTAILSLAAACSSAGVVVLYTRDVDM 115

Query: 146 CAQNH---CSRFETATAMAFMSWFAASPSFILNFWTLAS 181
           CA +    C R++ + A+AF++W   + S  + FW LAS
Sbjct: 116 CATHKIIPCHRYQVSVALAFVTWALTAMSSHVMFWILAS 154


>Medtr1g074040.1 | CASP-like protein | HC | chr1:32902208-32903328 |
           20130731
          Length = 151

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 1/107 (0%)

Query: 76  YLVAAVSLQSLWSLSLAIADIYAILVRRGFRNPRIVSLFSVGDGITSTLTFSAACASAGI 135
           YLVAA+ LQ++WS  LA+ D YA++ ++   NP +VSL+ VGD +++TL+ +AAC+SAGI
Sbjct: 44  YLVAAMGLQAIWSFLLALMDAYAVVRKKVLHNPALVSLYLVGDWVSATLSLAAACSSAGI 103

Query: 136 TVLIGNDLNECA-QNHCSRFETATAMAFMSWFAASPSFILNFWTLAS 181
            VL  +DL  C     C  ++ +   AF+SW   S S ++  W LA 
Sbjct: 104 IVLYFHDLGHCYFGEKCRSYQISVGFAFLSWIPTSISSLIMLWLLAG 150


>Medtr8g078830.1 | CASP-like protein | HC | chr8:33585211-33583022 |
           20130731
          Length = 152

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 7/153 (4%)

Query: 26  MKDIQGMPGTXXXXXXXXXXXXRFLQFSFALVSLSVMATTSDFPSVTAFRYLVAAVSLQS 85
           M+++ G+ GT            R  Q  F+  SL  M    DF   +AF +LV  + L  
Sbjct: 1   MEELPGVLGTSSSFAL------RLGQTVFSSASLFFMCLDVDFYGYSAFCFLVMVMGLVI 54

Query: 86  LWSLSLAIADIYAILVRRGFRNPRIVSLFSVGDGITSTLTFSAACASAGITVLIGN-DLN 144
            WS +L + D Y+I ++   +  R +   + GD + S L  +AAC++A +T L+ + D +
Sbjct: 55  SWSTTLLVVDAYSIFIKSVPKQRRFIFTITFGDMVLSYLLLAAACSTASVTDLLRSADKS 114

Query: 145 ECAQNHCSRFETATAMAFMSWFAASPSFILNFW 177
            C +N CSR++ + AMA ++WF +S S ++NFW
Sbjct: 115 YCPENLCSRYQISAAMAILAWFLSSASCLINFW 147


>Medtr1g043450.1 | CASP-like protein | HC | chr1:16325008-16322113 |
           20130731
          Length = 152

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 7/139 (5%)

Query: 26  MKDIQGMPGTXXXXXXXXXXXXRFLQFSFALVSLSVMATTSDFPSVTAFRYLVAAVSLQS 85
           MK+  G PGT            R  QF FA  S++ +ATT  F   T+F +L+A+++LQ 
Sbjct: 1   MKNFSGTPGTVLGLIL------RMSQFIFATGSIASIATTPSFFYYTSFCFLIASMALQI 54

Query: 86  LWSLSLAIADIYAILVRRGFRNPRIVSLFSVGDGITSTLTFSAACASAGITVLIGNDLNE 145
           +WS  LA+ D YA+L ++   NP ++SLF VGD +T+T++ +AA ASAG+TVL  +D+  
Sbjct: 55  IWSFVLALLDAYALLKKKVLLNPVLISLFVVGDWVTATISLAAASASAGLTVLYFHDMGH 114

Query: 146 CA-QNHCSRFETATAMAFM 163
           C     C +++ + A AFM
Sbjct: 115 CHFGEECQKYQISVAFAFM 133


>Medtr4g068780.1 | CASP-like protein | HC | chr4:25795138-25796852 |
           20130731
          Length = 166

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 7/160 (4%)

Query: 23  IHTMKDIQGMPGTXXXXXXXXXXXXRFLQFSFALVSLSVMATTSDFPSVTAFRYLVAAVS 82
           I  M +I G  GT            R  Q  F+  SL  M+   +F S TAF YLV  + 
Sbjct: 12  ISYMNEIPGSVGTSASFIL------RLGQTLFSSASLLFMSLGVEFYSYTAFCYLVTIMG 65

Query: 83  LQSLWSLSLAIADIYAILVRRGFRNPRIVSLFSVGDGITSTLTFSAACASAGITVLIGND 142
           L   WS +LA+ D Y++LV+   R P I+ +  VGD + STLT +AA ++A +  L+ N 
Sbjct: 66  LVIPWSFTLALVDGYSVLVKCPIRQPGILLIIVVGDWVLSTLTLAAAASTASVVDLLLNS 125

Query: 143 LNE-CAQNHCSRFETATAMAFMSWFAASPSFILNFWTLAS 181
               C    C R+  +  MAF+SWF +  S + N + L S
Sbjct: 126 QGSFCPIKLCCRYRISAVMAFVSWFLSLASSLFNLYLLPS 165


>Medtr5g018680.1 | CASP-like protein | HC | chr5:6964676-6966875 |
           20130731
          Length = 152

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 1/135 (0%)

Query: 48  RFLQFSFALVSLSVMATTSDFPSVTAFRYLVAAVSLQSLWSLSLAIADIYAILVRRGFRN 107
           R  Q  F+  SL  M     F S T+F +LV  + L   WS++L + D Y++ ++     
Sbjct: 17  RLGQIVFSSASLCFMCLDVGFYSYTSFSFLVTVMGLAIPWSITLFMVDAYSVFIQCLPIQ 76

Query: 108 PRIVSLFSVGDGITSTLTFSAACASAGITVLIGN-DLNECAQNHCSRFETATAMAFMSWF 166
            R++ +  +GD + S L+ +AAC++A +  L+     + C    C R++ + AMAF+SWF
Sbjct: 77  KRLILIIVLGDMVMSYLSLAAACSAASVIDLLHEAGKSHCPAKLCGRYQLSAAMAFLSWF 136

Query: 167 AASPSFILNFWTLAS 181
            +  S + NFW L S
Sbjct: 137 LSLASCLFNFWILPS 151


>Medtr4g113590.1 | CASP-like protein | HC | chr4:46708021-46707535 |
           20130731
          Length = 63

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 33/47 (70%)

Query: 75  RYLVAAVSLQSLWSLSLAIADIYAILVRRGFRNPRIVSLFSVGDGIT 121
            YL+AA+ LQ++WS  LA+ D YA++ R+   NP +V L+ VGD ++
Sbjct: 3   NYLIAAMGLQAIWSFVLALMDAYAVVRRKVLHNPVLVCLYMVGDWVS 49