Miyakogusa Predicted Gene

Lj0g3v0180959.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0180959.1 Non Characterized Hit- tr|B9F642|B9F642_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,57.29,5e-17,seg,NULL; WPP,WPP domain,CUFF.11492.1
         (226 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g102500.1 | MFP1 attachment factor-like protein | HC | chr...   128   4e-30
Medtr1g018710.1 | MFP1 attachment factor-like protein | HC | chr...   120   1e-27
Medtr1g072250.1 | RAN GTPase activating protein | HC | chr1:3205...    71   7e-13
Medtr1g072250.2 | RAN GTPase activating protein | HC | chr1:3205...    71   7e-13
Medtr1g105040.1 | RAN GTPase activating protein | HC | chr1:4733...    54   1e-07

>Medtr3g102500.1 | MFP1 attachment factor-like protein | HC |
           chr3:47238914-47237913 | 20130731
          Length = 161

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/93 (69%), Positives = 73/93 (78%), Gaps = 1/93 (1%)

Query: 96  FSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXXXXX 155
           FSIWPPTQRTRDAVI RLIETL+TPSVLSKRYGT+P+DEA +AARQIE            
Sbjct: 34  FSIWPPTQRTRDAVITRLIETLTTPSVLSKRYGTLPSDEAVSAARQIEEDAFSVAGDSAV 93

Query: 156 XD-TDGIEILQVYSKEISKRMLDSVKSRATTGS 187
            D  DGIEILQVYSKEISK+ML++VK+R T  S
Sbjct: 94  PDGGDGIEILQVYSKEISKKMLETVKARPTVDS 126


>Medtr1g018710.1 | MFP1 attachment factor-like protein | HC |
           chr1:5453115-5453931 | 20130731
          Length = 139

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 72/98 (73%), Gaps = 1/98 (1%)

Query: 86  PSATNLSGISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXX 145
           P   N +G ++SIWPP QRTRDAV NRLIETLSTPSVL+KRYGTM ADEASAAA QIE  
Sbjct: 17  PQQPNFTG-NYSIWPPKQRTRDAVKNRLIETLSTPSVLTKRYGTMSADEASAAAIQIEDE 75

Query: 146 XXXXXXXXXXXDTDGIEILQVYSKEISKRMLDSVKSRA 183
                        D + IL+VYSKEISKRM+++VK+++
Sbjct: 76  AFSVANASSSTSNDNVTILEVYSKEISKRMIETVKAKS 113


>Medtr1g072250.1 | RAN GTPase activating protein | HC |
           chr1:32059969-32062806 | 20130731
          Length = 533

 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 2/89 (2%)

Query: 94  ISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXXX 153
           +S  +WPP+Q TR  ++ R++  L+TPS+ S++YG +  DEA   A++IE          
Sbjct: 13  LSIKLWPPSQSTRSMLVGRMVRNLTTPSIFSRKYGLLNKDEAEKDAKEIEDAAFVTATQH 72

Query: 154 XXX--DTDGIEILQVYSKEISKRMLDSVK 180
                D DG   +Q+Y+KE SK ML+ +K
Sbjct: 73  FEKEPDGDGSSAVQIYAKESSKLMLEVLK 101


>Medtr1g072250.2 | RAN GTPase activating protein | HC |
           chr1:32059858-32062923 | 20130731
          Length = 533

 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 2/89 (2%)

Query: 94  ISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXXX 153
           +S  +WPP+Q TR  ++ R++  L+TPS+ S++YG +  DEA   A++IE          
Sbjct: 13  LSIKLWPPSQSTRSMLVGRMVRNLTTPSIFSRKYGLLNKDEAEKDAKEIEDAAFVTATQH 72

Query: 154 XXX--DTDGIEILQVYSKEISKRMLDSVK 180
                D DG   +Q+Y+KE SK ML+ +K
Sbjct: 73  FEKEPDGDGSSAVQIYAKESSKLMLEVLK 101


>Medtr1g105040.1 | RAN GTPase activating protein | HC |
           chr1:47338466-47340067 | 20130731
          Length = 533

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 94  ISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPADEASAAARQIEXXXXXXXXX- 152
            S  +WPP+Q TR  ++ ++   L+T S+ +++Y T+   +A   A++IE          
Sbjct: 10  FSIKLWPPSQNTRQTLVEKMTNNLTTKSIFTQKYETLHPKQAEENAKRIEDKAFATANLH 69

Query: 153 -XXXXDTDGIEILQVYSKEISKRMLDSVK 180
                D DG   +Q+Y+KE SK +L+ +K
Sbjct: 70  YEKEPDGDGGSAVQLYAKECSKLLLELLK 98