Miyakogusa Predicted Gene

Lj0g3v0180009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0180009.1 Non Characterized Hit- tr|I1H2U9|I1H2U9_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,45.65,4e-19,TRANSCRIPTION FACTOR X1-LIKE,NULL; RIBONUCLEASE P
PROTEIN SUBUNIT P38-RELATED,NULL; XH,Uncharacteris,CUFF.11421.1
         (107 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g006760.1 | XH/XS domain protein | HC | chr4:797451-803235...    99   1e-21
Medtr4g131350.1 | XH/XS domain protein | HC | chr4:54788977-5479...    94   3e-20
Medtr3g067815.1 | XH/XS domain protein | HC | chr3:30442774-3045...    89   9e-19
Medtr3g067815.2 | XH/XS domain protein | HC | chr3:30442712-3045...    89   9e-19
Medtr4g125920.1 | XH/XS domain protein | HC | chr4:52281801-5228...    89   1e-18
Medtr3g067855.1 | XH/XS domain protein | LC | chr3:30473571-3047...    87   3e-18
Medtr5g079940.2 | XH/XS domain protein | HC | chr5:34197983-3420...    83   7e-17
Medtr5g079940.1 | XH/XS domain protein | HC | chr5:34197952-3420...    83   7e-17
Medtr3g067845.1 | XH/XS domain protein | LC | chr3:30465601-3046...    69   1e-12
Medtr2g097000.1 | XH/XS domain protein | HC | chr2:41469407-4147...    64   4e-11
Medtr4g126200.1 | XH/XS domain protein | HC | chr4:52481073-5248...    62   1e-10
Medtr2g097010.1 | XH/XS domain protein | HC | chr2:41475531-4147...    62   1e-10
Medtr2g097020.1 | XH/XS domain protein | HC | chr2:41482585-4148...    59   1e-09
Medtr2g095400.1 | XH/XS domain protein, putative | HC | chr2:407...    54   3e-08
Medtr4g046643.1 | XH/XS domain protein | HC | chr4:16410194-1640...    52   1e-07

>Medtr4g006760.1 | XH/XS domain protein | HC | chr4:797451-803235 |
           20130731
          Length = 626

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 72/105 (68%), Gaps = 1/105 (0%)

Query: 1   MEQLELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRG-RSQLGIKRMGELDPKPF 59
           +E LE +E++NS+L+VKE Q   E+ +ARKE ++ L +M  G ++ +G KRMG+LD K F
Sbjct: 444 IESLEDMESMNSTLIVKERQSNDELQEARKELIEGLNEMLTGAKTNIGTKRMGDLDQKVF 503

Query: 60  QTFCSQKYSCEQWQDISAKLCSSWEENLKDSAWHPFKTIEVNGIP 104
              C +++S ++    + +LCS W+EN+K+SAWHPFK +  N  P
Sbjct: 504 VNACKKRFSSDEAGIKAVELCSLWQENVKNSAWHPFKVVSQNDNP 548


>Medtr4g131350.1 | XH/XS domain protein | HC |
           chr4:54788977-54795616 | 20130731
          Length = 682

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 70/104 (67%), Gaps = 3/104 (2%)

Query: 1   MEQLELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRG--RSQLGIKRMGELDPKP 58
           +E LE +E++N +L+VKE Q   E+ +ARKE +  L +M  G  ++ +G KRMG+LD K 
Sbjct: 499 IESLEDMESMNQTLIVKERQSNDELQEARKELIKGLNEMLTGINKTNIGTKRMGDLDEKV 558

Query: 59  FQTFCSQKYSCEQWQDISA-KLCSSWEENLKDSAWHPFKTIEVN 101
           F   C +++  ++   + A +LCS W+EN+K+SAWHPFK + VN
Sbjct: 559 FVQVCKKRFVSQEEAGMKAMELCSVWQENVKNSAWHPFKVVRVN 602


>Medtr3g067815.1 | XH/XS domain protein | HC |
           chr3:30442774-30450725 | 20130731
          Length = 640

 Score = 89.0 bits (219), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 65/99 (65%), Gaps = 1/99 (1%)

Query: 4   LELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRGRSQLGIKRMGELDPKPFQTFC 63
           L+ ++ LN +L++KE +   E+ DARKE +  +KD+   R  +G+KRMGELD  PF    
Sbjct: 464 LQDLDALNQTLIIKERKSNDELQDARKELISGIKDIG-TRVHIGVKRMGELDTGPFLEAM 522

Query: 64  SQKYSCEQWQDISAKLCSSWEENLKDSAWHPFKTIEVNG 102
            ++Y+ E+ +D +++LCS WEE LKD  WHPFK +   G
Sbjct: 523 KKRYNEEEAEDKASELCSLWEEYLKDPDWHPFKVVMNEG 561


>Medtr3g067815.2 | XH/XS domain protein | HC |
           chr3:30442712-30450961 | 20130731
          Length = 640

 Score = 89.0 bits (219), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 65/99 (65%), Gaps = 1/99 (1%)

Query: 4   LELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRGRSQLGIKRMGELDPKPFQTFC 63
           L+ ++ LN +L++KE +   E+ DARKE +  +KD+   R  +G+KRMGELD  PF    
Sbjct: 464 LQDLDALNQTLIIKERKSNDELQDARKELISGIKDIG-TRVHIGVKRMGELDTGPFLEAM 522

Query: 64  SQKYSCEQWQDISAKLCSSWEENLKDSAWHPFKTIEVNG 102
            ++Y+ E+ +D +++LCS WEE LKD  WHPFK +   G
Sbjct: 523 KKRYNEEEAEDKASELCSLWEEYLKDPDWHPFKVVMNEG 561


>Medtr4g125920.1 | XH/XS domain protein | HC |
           chr4:52281801-52288038 | 20130731
          Length = 629

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 68/104 (65%), Gaps = 3/104 (2%)

Query: 1   MEQLELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRG--RSQLGIKRMGELDPKP 58
           +E LE +E++N +L+ KE Q   E+ +ARKE +  L +M  G  ++ +G KRMG+LD K 
Sbjct: 446 IESLEDMESMNQTLIDKERQSNDELQEARKELIAGLNEMLTGNNKTNIGTKRMGDLDQKV 505

Query: 59  FQTFCSQKYSCEQWQDISA-KLCSSWEENLKDSAWHPFKTIEVN 101
           F   C +++  E+   + A +LCS W+EN+K+SAWHPFK +  N
Sbjct: 506 FVNVCKKRFLSEEEAGMKAMELCSFWQENVKNSAWHPFKVVREN 549


>Medtr3g067855.1 | XH/XS domain protein | LC |
           chr3:30473571-30475720 | 20130731
          Length = 362

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 62/94 (65%)

Query: 13  SLVVKEHQYKQEILDARKESLDSLKDMFRGRSQLGIKRMGELDPKPFQTFCSQKYSCEQW 72
           +L++KE +   E+LDARKE +  +K+M      +G+KRMGE++ +PF     ++++    
Sbjct: 171 TLIIKERRSNDELLDARKELICVIKEMSTSDKHIGVKRMGEINIEPFLAAMKKRFNARTA 230

Query: 73  QDISAKLCSSWEENLKDSAWHPFKTIEVNGIPQV 106
           ++ +AKLCSSWEE++KD  WHPFK + V+    V
Sbjct: 231 KNRAAKLCSSWEESIKDPNWHPFKVVLVDSDAHV 264


>Medtr5g079940.2 | XH/XS domain protein | HC | chr5:34197983-34205199
            | 20130731
          Length = 1122

 Score = 82.8 bits (203), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 66/101 (65%), Gaps = 1/101 (0%)

Query: 2    EQLELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRGRSQLGIKRMGELDPKPFQT 61
            + L  ++ LN +L++KE +   E+ +ARKE + ++K+M   R+ + +KRMGELD +PF  
Sbjct: 942  QSLRDMDALNQTLIIKERKSNDELQEARKELITTIKEM-PSRADIRVKRMGELDFRPFLE 1000

Query: 62   FCSQKYSCEQWQDISAKLCSSWEENLKDSAWHPFKTIEVNG 102
               +KY+ +  +D +++LCS WEE LKD  WHPFK   + G
Sbjct: 1001 AMKKKYNEDVAEDRASELCSLWEEYLKDPDWHPFKISTIEG 1041


>Medtr5g079940.1 | XH/XS domain protein | HC | chr5:34197952-34206055
            | 20130731
          Length = 1122

 Score = 82.8 bits (203), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 66/101 (65%), Gaps = 1/101 (0%)

Query: 2    EQLELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRGRSQLGIKRMGELDPKPFQT 61
            + L  ++ LN +L++KE +   E+ +ARKE + ++K+M   R+ + +KRMGELD +PF  
Sbjct: 942  QSLRDMDALNQTLIIKERKSNDELQEARKELITTIKEM-PSRADIRVKRMGELDFRPFLE 1000

Query: 62   FCSQKYSCEQWQDISAKLCSSWEENLKDSAWHPFKTIEVNG 102
               +KY+ +  +D +++LCS WEE LKD  WHPFK   + G
Sbjct: 1001 AMKKKYNEDVAEDRASELCSLWEEYLKDPDWHPFKISTIEG 1041


>Medtr3g067845.1 | XH/XS domain protein | LC |
           chr3:30465601-30466796 | 20130731
          Length = 278

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 59/98 (60%), Gaps = 2/98 (2%)

Query: 10  LNSSLVVKEHQYKQEILDARKESLDSLKDM--FRGRSQLGIKRMGELDPKPFQTFCSQKY 67
            N  L++KEH+   E+  ARK  +   K++        +G+KR+ +L+ KPF     ++Y
Sbjct: 78  FNQKLIIKEHKSNDELQYARKILIHIFKEISNISDDEHIGVKRIRDLNTKPFINAMKKRY 137

Query: 68  SCEQWQDISAKLCSSWEENLKDSAWHPFKTIEVNGIPQ 105
           + ++ +  +++LCS W EN+KD+ W+P K + V+G+ +
Sbjct: 138 NADEAEIRASRLCSLWVENIKDTNWNPVKIVFVDGVAK 175


>Medtr2g097000.1 | XH/XS domain protein | HC |
           chr2:41469407-41472176 | 20130731
          Length = 389

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 14/111 (12%)

Query: 2   EQLELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRG-RSQLGIKRMGELDPKPFQ 60
           E+LE V +   +LVV+E +   E+ DARK+ +  +    +  R+ + +KRMGEL+ KPF 
Sbjct: 194 EELEGVIHPQQALVVQERKTNDELQDARKKLISWIGCPKKAPRAIISVKRMGELEIKPFL 253

Query: 61  TFCSQKYS-------------CEQWQDISAKLCSSWEENLKDSAWHPFKTI 98
               +K+S              E+WQ  + + CS+W++ LKD +WHPFK +
Sbjct: 254 EAAKRKFSDEVNEKKATKAQLREKWQLKAIEWCSTWDDCLKDPSWHPFKVV 304


>Medtr4g126200.1 | XH/XS domain protein | HC |
           chr4:52481073-52482426 | 20130731
          Length = 257

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 17/114 (14%)

Query: 2   EQLELVENLNSSLVVKEHQYKQEILDARKESLDSLKDMFRGRSQLGIKRMGELDPKPFQT 61
           E L+ +++L  +LVV+E +   E+ DARK+ +  +    + R+ + +KRMG LD +PF  
Sbjct: 55  EGLQDMDDLQRTLVVQERKTNDELQDARKKLISWIGCPKKPRTIISVKRMGNLDTEPFLE 114

Query: 62  FCSQKYS-----------------CEQWQDISAKLCSSWEENLKDSAWHPFKTI 98
              +K+S                  E+ Q  + + CS W+E LKD +WHPFK +
Sbjct: 115 AAKRKFSDEVNGKARPRKKARNKVSEEVQLKAVEWCSKWDECLKDPSWHPFKIV 168


>Medtr2g097010.1 | XH/XS domain protein | HC |
           chr2:41475531-41479177 | 20130731
          Length = 678

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 14/104 (13%)

Query: 9   NLNSSLVVKEHQYKQEILDARKESLDSLKDMFRG-RSQLGIKRMGELDPKPFQTFCSQKY 67
           +L  +LVV+E +   E+ DARK+ +  +    +  R+ + +KRMGEL+ KPF     +K+
Sbjct: 490 DLQQTLVVQERKTNDELQDARKKLISWIGCPKKAPRAIISVKRMGELEIKPFLEAAKRKF 549

Query: 68  S-------------CEQWQDISAKLCSSWEENLKDSAWHPFKTI 98
           S              E+WQ  + + CS+W++ LKD +WHPFK +
Sbjct: 550 SDEVNEKKATKAQLREKWQLKAIEWCSTWDDCLKDPSWHPFKVV 593


>Medtr2g097020.1 | XH/XS domain protein | HC |
           chr2:41482585-41486302 | 20130731
          Length = 667

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 14/104 (13%)

Query: 9   NLNSSLVVKEHQYKQEILDARKESLDSLK-DMFRGRSQLGIKRMGELDPKPFQTFCSQKY 67
           +L  +LVV+E +   E+ DARK+ +  +       R  + +KRMGELD KPFQ    +K 
Sbjct: 479 DLQQTLVVQERKTNDELQDARKKLIAWIGCPKTSARVIISVKRMGELDIKPFQEAAKRKI 538

Query: 68  S-------------CEQWQDISAKLCSSWEENLKDSAWHPFKTI 98
           S              E+ Q  + + CS W++ +KD +WHPFK +
Sbjct: 539 SDEMNEKAVTKREFSEKVQMKAIEWCSKWDDCVKDPSWHPFKVV 582


>Medtr2g095400.1 | XH/XS domain protein, putative | HC |
           chr2:40749790-40753431 | 20130731
          Length = 637

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 16/105 (15%)

Query: 9   NLNSSLVVKEHQYKQEILDARKESLDSLKDMFRGRSQ--LGIKRMGELDPKPFQTFCSQK 66
           +L  +LVV+E +   E+ DARK+ L S     +  +Q  + +KRMGE+D KPF     +K
Sbjct: 464 DLQQTLVVQERKTNDELQDARKK-LISWIGCPKNTAQVIISVKRMGEVDIKPFLEAAKRK 522

Query: 67  YSCEQWQDISAKL-------------CSSWEENLKDSAWHPFKTI 98
            S E  +  + K              CS W++ +KD +WHPFK +
Sbjct: 523 ISDEMNEKAATKRKLSEAGKMKAIEWCSKWDDCVKDPSWHPFKVV 567


>Medtr4g046643.1 | XH/XS domain protein | HC |
           chr4:16410194-16406263 | 20130731
          Length = 719

 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 22/111 (19%)

Query: 9   NLNSSLVVKEHQYKQEILDARKESLDSLKDMFR---GRSQLGI--KRMGELDPKPFQTFC 63
           +L  +LVV+E +   E+ DARK+    L   FR     +Q+ I  K MG+LD KPF+   
Sbjct: 485 DLQQTLVVQERKTNDELQDARKK----LISWFRCPKNTNQVIIAGKMMGKLDIKPFEEAA 540

Query: 64  SQKYSCE------QWQDISAKL-------CSSWEENLKDSAWHPFKTIEVN 101
            +K+S E        + +S K+       CS W+E L D +WHPFK +  N
Sbjct: 541 KRKFSDEVNEKAMTKKKLSNKVKSKANEWCSKWDEYLSDPSWHPFKFVTDN 591