Miyakogusa Predicted Gene

Lj0g3v0179269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0179269.1 tr|C7J3G3|C7J3G3_ORYSJ Os06g0137100 protein
OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=4
SV=,70.91,0.00000000000001,ARM repeat,Armadillo-type fold; no
description,Armadillo-like helical,CUFF.11363.1
         (179 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g075060.1 | armadillo repeat kinesin-like protein | HC | c...   360   e-100
Medtr5g011500.1 | armadillo repeat kinesin-like protein | HC | c...   316   7e-87

>Medtr7g075060.1 | armadillo repeat kinesin-like protein | HC |
           chr7:28170012-28154412 | 20130731
          Length = 888

 Score =  360 bits (924), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 172/179 (96%), Positives = 175/179 (97%)

Query: 1   MAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHP 60
           MAEGGITLLSM ASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHP
Sbjct: 710 MAEGGITLLSMAASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHP 769

Query: 61  DVLSQVARGIANFAKCESRASNQGIKSGRSILIEDGALPWIVQNANNEAAPIRRHIELAL 120
           DVLSQVARGIANFAKCESRASNQG+K+GRSILIEDGALPWIVQNANNEAAPIRRHIELAL
Sbjct: 770 DVLSQVARGIANFAKCESRASNQGVKTGRSILIEDGALPWIVQNANNEAAPIRRHIELAL 829

Query: 121 CHLAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPPFKAELRRLRVEY 179
           CHLAQHE NAKDMISGGALWELVRISRDCSREDIRSLA RTLSSI PFK+ELRRLRVEY
Sbjct: 830 CHLAQHEANAKDMISGGALWELVRISRDCSREDIRSLAHRTLSSITPFKSELRRLRVEY 888


>Medtr5g011500.1 | armadillo repeat kinesin-like protein | HC |
           chr5:3314477-3323105 | 20130731
          Length = 894

 Score =  316 bits (810), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 146/177 (82%), Positives = 165/177 (93%)

Query: 1   MAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHP 60
           MA+GGI+LLSMTA++AEDPQTLRMVAGAIANLCGNDK+   LR +GGIKALLG+VRC HP
Sbjct: 716 MAQGGISLLSMTAANAEDPQTLRMVAGAIANLCGNDKLQTELRGEGGIKALLGMVRCRHP 775

Query: 61  DVLSQVARGIANFAKCESRASNQGIKSGRSILIEDGALPWIVQNANNEAAPIRRHIELAL 120
           DV +QVARGIAN+AKCESRAS+QG+KSGRS LIEDGALPWIVQNANNEA+ IRRHIELAL
Sbjct: 776 DVHAQVARGIANYAKCESRASSQGLKSGRSFLIEDGALPWIVQNANNEASSIRRHIELAL 835

Query: 121 CHLAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPPFKAELRRLRV 177
           CHLAQHE NA+DMI GGALWELVRISRDCSREDI++LA RTL+SIP F+AE+RR+RV
Sbjct: 836 CHLAQHEANARDMIKGGALWELVRISRDCSREDIKTLAHRTLASIPAFQAEMRRMRV 892