Miyakogusa Predicted Gene

Lj0g3v0178909.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0178909.1 Non Characterized Hit- tr|I3SY87|I3SY87_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.53,0,no
description,Histone deacetylase domain; SUBFAMILY NOT NAMED,NULL;
HISTONE DEACETYLASE,Histone
dea,NODE_26479_length_899_cov_104.684090.path3.1
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g093800.1 | histone deacetylase superfamily protein | HC |...   395   e-110
Medtr4g109500.2 | histone deacetylase superfamily protein | HC |...   119   2e-27
Medtr4g109500.1 | histone deacetylase superfamily protein | HC |...   119   2e-27
Medtr4g111985.2 | histone deacetylase superfamily protein | HC |...   109   2e-24
Medtr4g111985.5 | histone deacetylase superfamily protein | HC |...   109   2e-24
Medtr4g111985.1 | histone deacetylase superfamily protein | HC |...   109   2e-24
Medtr2g087270.1 | histone deacetylase superfamily protein | HC |...    95   5e-20
Medtr4g111985.3 | histone deacetylase superfamily protein | HC |...    92   4e-19
Medtr4g111985.4 | histone deacetylase superfamily protein | HC |...    92   4e-19
Medtr3g077160.1 | histone deacetylase family protein | HC | chr3...    65   6e-11
Medtr5g004640.2 | histone deacetylase family protein | HC | chr5...    64   8e-11
Medtr5g004640.1 | histone deacetylase family protein | HC | chr5...    64   8e-11
Medtr3g118535.1 | histone deacetylase family protein | HC | chr3...    63   2e-10
Medtr1g016440.1 | histone deacetylase superfamily protein | HC |...    57   9e-09
Medtr4g055080.2 | histone deacetylase family protein | HC | chr4...    57   2e-08
Medtr4g055080.1 | histone deacetylase family protein | HC | chr4...    56   2e-08

>Medtr8g093800.1 | histone deacetylase superfamily protein | HC |
           chr8:39251957-39246652 | 20130731
          Length = 420

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/215 (88%), Positives = 198/215 (92%)

Query: 1   MGFFVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSYP 60
           MGF +FGNVAIAAR+AQRVH LKRVFIIDFDVHHGNGTNDAFYDDPD+FFLSFHQDGSYP
Sbjct: 206 MGFCIFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLSFHQDGSYP 265

Query: 61  GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGH 120
           GTGKF            LNLPLPGGSGDTAIR+VFDEVVVPCAQRFKPDIILVSAGYDGH
Sbjct: 266 GTGKFDEVGAGDGEGTTLNLPLPGGSGDTAIRSVFDEVVVPCAQRFKPDIILVSAGYDGH 325

Query: 121 VLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRALIG 180
           VLDPLANLQ TTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVAD+FRAL+G
Sbjct: 326 VLDPLANLQLTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLG 385

Query: 181 DQSLASEFDNPNILYEEPTAKIKQAIQRIKHIHSL 215
           D+SLASEFDNPNILYEEPT KIKQAIQRIK +HSL
Sbjct: 386 DKSLASEFDNPNILYEEPTKKIKQAIQRIKCVHSL 420


>Medtr4g109500.2 | histone deacetylase superfamily protein | HC |
           chr4:45499722-45507261 | 20130731
          Length = 650

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 102/199 (51%), Gaps = 25/199 (12%)

Query: 1   MGFFVFGNVAIAARYAQRVH---ALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQ-- 55
           MGF +F NVA+AA Y         +K++ I+D+DVHHGNGT   F++D  + F S H+  
Sbjct: 156 MGFCLFNNVAVAASYLLNDSPELGVKKILIVDWDVHHGNGTQKVFWNDSRVLFFSVHRHE 215

Query: 56  ---------DGSYPGTGKFXXXXXXXXXXXXLNLPLPGG-SGDTAIRTVFDEVVVPCAQR 105
                    DG Y  TG+             +N+P   G  GDT     +D +++P A+ 
Sbjct: 216 FGRFYPCGDDGFYNMTGE------GDGAGYNINVPWENGRCGDTDYFAAWDHILLPVAKE 269

Query: 106 FKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLK 165
           F PDII+VSAG+D  V DPL     T   Y +L   +   A+    GR V  LEGGYNL 
Sbjct: 270 FNPDIIIVSAGFDAAVGDPLGGCCITPFGYSLLLKKLMNFAE----GRIVLVLEGGYNLD 325

Query: 166 SLSYSVADSFRALIGDQSL 184
           S++ S+      L+ D+ L
Sbjct: 326 SIAKSMHACVEVLLEDKPL 344


>Medtr4g109500.1 | histone deacetylase superfamily protein | HC |
           chr4:45499722-45507261 | 20130731
          Length = 655

 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 102/199 (51%), Gaps = 25/199 (12%)

Query: 1   MGFFVFGNVAIAARYAQRVH---ALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQ-- 55
           MGF +F NVA+AA Y         +K++ I+D+DVHHGNGT   F++D  + F S H+  
Sbjct: 156 MGFCLFNNVAVAASYLLNDSPELGVKKILIVDWDVHHGNGTQKVFWNDSRVLFFSVHRHE 215

Query: 56  ---------DGSYPGTGKFXXXXXXXXXXXXLNLPLPGG-SGDTAIRTVFDEVVVPCAQR 105
                    DG Y  TG+             +N+P   G  GDT     +D +++P A+ 
Sbjct: 216 FGRFYPCGDDGFYNMTGE------GDGAGYNINVPWENGRCGDTDYFAAWDHILLPVAKE 269

Query: 106 FKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLK 165
           F PDII+VSAG+D  V DPL     T   Y +L   +   A+    GR V  LEGGYNL 
Sbjct: 270 FNPDIIIVSAGFDAAVGDPLGGCCITPFGYSLLLKKLMNFAE----GRIVLVLEGGYNLD 325

Query: 166 SLSYSVADSFRALIGDQSL 184
           S++ S+      L+ D+ L
Sbjct: 326 SIAKSMHACVEVLLEDKPL 344


>Medtr4g111985.2 | histone deacetylase superfamily protein | HC |
           chr4:46338588-46328537 | 20130731
          Length = 599

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 9/172 (5%)

Query: 23  KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS-YPGTGKFXXXXXXXXXXXXLN 79
           ++V I+D+DVHHGNGT + F  +  + ++S   H+DG+ YPGTG              +N
Sbjct: 352 RKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVN 411

Query: 80  LPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYML 138
           +P   GG GD      F  VV+P A  F PD  ++SAG+D    DPL     T   Y  +
Sbjct: 412 IPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQM 471

Query: 139 ASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRALIGDQSLASEFDN 190
              +  L+    GG+ +  LEGGYNL+S+S S     + L+G+ S   E +N
Sbjct: 472 THMLNALS----GGKMLVILEGGYNLRSISSSATSVIKVLLGE-SPVCELEN 518


>Medtr4g111985.5 | histone deacetylase superfamily protein | HC |
           chr4:46338860-46328537 | 20130731
          Length = 599

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 9/172 (5%)

Query: 23  KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS-YPGTGKFXXXXXXXXXXXXLN 79
           ++V I+D+DVHHGNGT + F  +  + ++S   H+DG+ YPGTG              +N
Sbjct: 352 RKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVN 411

Query: 80  LPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYML 138
           +P   GG GD      F  VV+P A  F PD  ++SAG+D    DPL     T   Y  +
Sbjct: 412 IPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQM 471

Query: 139 ASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRALIGDQSLASEFDN 190
              +  L+    GG+ +  LEGGYNL+S+S S     + L+G+ S   E +N
Sbjct: 472 THMLNALS----GGKMLVILEGGYNLRSISSSATSVIKVLLGE-SPVCELEN 518


>Medtr4g111985.1 | histone deacetylase superfamily protein | HC |
           chr4:46339481-46328880 | 20130731
          Length = 640

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 9/172 (5%)

Query: 23  KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS-YPGTGKFXXXXXXXXXXXXLN 79
           ++V I+D+DVHHGNGT + F  +  + ++S   H+DG+ YPGTG              +N
Sbjct: 391 RKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVN 450

Query: 80  LPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYML 138
           +P   GG GD      F  VV+P A  F PD  ++SAG+D    DPL     T   Y  +
Sbjct: 451 IPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQM 510

Query: 139 ASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRALIGDQSLASEFDN 190
              +  L+    GG+ +  LEGGYNL+S+S S     + L+G+ S   E +N
Sbjct: 511 THMLNALS----GGKMLVILEGGYNLRSISSSATSVIKVLLGE-SPVCELEN 557


>Medtr2g087270.1 | histone deacetylase superfamily protein | HC |
           chr2:36680260-36677137 | 20130731
          Length = 386

 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 6/183 (3%)

Query: 2   GFFVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQD----- 56
           G+    N  +A + A      K+V +ID DVH+GNGT + FY    +  +S H +     
Sbjct: 163 GYCFLNNAGLAVQLALDS-GCKKVAVIDIDVHYGNGTAEGFYSSNKVLTVSLHMNHGSWG 221

Query: 57  GSYPGTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAG 116
            S+P +G              LN+PLP G+GD      F+E+VVP   +F+PD+I++  G
Sbjct: 222 PSHPQSGSIDELGDGEGYGYNLNIPLPNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVG 281

Query: 117 YDGHVLDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFR 176
            D    DP      T   Y  +   +  LA     GR +   EGGY++   +Y +  +  
Sbjct: 282 QDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLE 341

Query: 177 ALI 179
            ++
Sbjct: 342 GVL 344


>Medtr4g111985.3 | histone deacetylase superfamily protein | HC |
           chr4:46338755-46328564 | 20130731
          Length = 512

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 8/144 (5%)

Query: 23  KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS-YPGTGKFXXXXXXXXXXXXLN 79
           ++V I+D+DVHHGNGT + F  +  + ++S   H+DG+ YPGTG              +N
Sbjct: 352 RKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVN 411

Query: 80  LPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYML 138
           +P   GG GD      F  VV+P A  F PD  ++SAG+D    DPL     T   Y  +
Sbjct: 412 IPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQM 471

Query: 139 ASSIKQLAKDLCGGRCVFFLEGGY 162
              +  L+    GG+ +  LEGG+
Sbjct: 472 THMLNALS----GGKMLVILEGGF 491


>Medtr4g111985.4 | histone deacetylase superfamily protein | HC |
           chr4:46338588-46328564 | 20130731
          Length = 512

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 8/144 (5%)

Query: 23  KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSF--HQDGS-YPGTGKFXXXXXXXXXXXXLN 79
           ++V I+D+DVHHGNGT + F  +  + ++S   H+DG+ YPGTG              +N
Sbjct: 352 RKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVN 411

Query: 80  LPLP-GGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYML 138
           +P   GG GD      F  VV+P A  F PD  ++SAG+D    DPL     T   Y  +
Sbjct: 412 IPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQM 471

Query: 139 ASSIKQLAKDLCGGRCVFFLEGGY 162
              +  L+    GG+ +  LEGG+
Sbjct: 472 THMLNALS----GGKMLVILEGGF 491


>Medtr3g077160.1 | histone deacetylase family protein | HC |
           chr3:34636818-34643051 | 20130731
          Length = 476

 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 3/118 (2%)

Query: 2   GFFVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGS-YP 60
           GF    ++ +      +VH  +RV  +D DVHHG+G  +AFY    +  +SFH+ G  +P
Sbjct: 170 GFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFP 227

Query: 61  GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYD 118
           GTG              LN+PL  G  D   R +F  ++      ++PD +++  G D
Sbjct: 228 GTGHIKDTGVGPGKDYALNVPLNDGMDDENFRALFRPIMQKVMDVYQPDAVVLQCGAD 285


>Medtr5g004640.2 | histone deacetylase family protein | HC |
           chr5:52671-45920 | 20130731
          Length = 495

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 2   GFFVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSY-P 60
           GF    ++ +A     ++H  +RV  +D D+HHG+G  +AFY    +  +SFH+ G Y P
Sbjct: 161 GFCYVNDIVLAILELLKIH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFP 218

Query: 61  GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYD 118
           GTG              LN+PL  G  D +  ++F  ++    + F+P  +++  G D
Sbjct: 219 GTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHSLFKPLMGKVMEVFRPGAVVLQCGAD 276


>Medtr5g004640.1 | histone deacetylase family protein | HC |
           chr5:52671-45920 | 20130731
          Length = 495

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 2   GFFVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSY-P 60
           GF    ++ +A     ++H  +RV  +D D+HHG+G  +AFY    +  +SFH+ G Y P
Sbjct: 161 GFCYVNDIVLAILELLKIH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFP 218

Query: 61  GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYD 118
           GTG              LN+PL  G  D +  ++F  ++    + F+P  +++  G D
Sbjct: 219 GTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHSLFKPLMGKVMEVFRPGAVVLQCGAD 276


>Medtr3g118535.1 | histone deacetylase family protein | HC |
           chr3:55483175-55497394 | 20130731
          Length = 498

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 3/118 (2%)

Query: 2   GFFVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSY-P 60
           GF    ++ +A     + H  +RV  +D D+HHG+G  +AFY    +  +SFH+ G Y P
Sbjct: 158 GFCYVNDIVLAILELLKQH--ERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFP 215

Query: 61  GTGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYD 118
           GTG              LN+PL  G  D +   +F  ++    + F+P  +++  G D
Sbjct: 216 GTGDLRDIGYGKGKYYSLNVPLDDGIDDESYHLLFKPLICKVMEIFRPGAVVLQCGAD 273


>Medtr1g016440.1 | histone deacetylase superfamily protein | HC |
           chr1:4371842-4377658 | 20130731
          Length = 350

 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 9/177 (5%)

Query: 2   GFFVFGNVAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSYPG 61
           GF  + ++++   +A     + RV IID D H GNG    F DD  ++ L  +  G YP 
Sbjct: 168 GFCAYADISLCIHFAFVQLNISRVIIIDLDAHQGNGHEMDFADDNRVYILDMYNPGIYP- 226

Query: 62  TGKFXXXXXXXXXXXXLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHV 121
                             + +  G+         DE +    +RF P++++ +AG D   
Sbjct: 227 ------LDHEARSYINQKVEVKSGTRTEEYLLKLDEALEVAGRRFNPELLVYNAGTDILE 280

Query: 122 LDPLANLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRAL 178
            DPL  L+ +     +    + + A+       V    GGY +KS +  +ADS   L
Sbjct: 281 GDPLGRLKISPDGIALRDEKVFRFARKK-NIPIVMLTSGGY-MKSSARVIADSILNL 335


>Medtr4g055080.2 | histone deacetylase family protein | HC |
           chr4:20028709-20022768 | 20130731
          Length = 405

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 2/123 (1%)

Query: 24  RVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGS--YPGTGKFXXXXXXXXXXXXLNLP 81
           RV  ID DVHHG+G  +AFY    +  +S H+ G   +PGTG              +N+P
Sbjct: 140 RVLYIDIDVHHGDGVEEAFYFTDRVMTVSSHKYGDLFFPGTGDAKEIGEREGKFYAINVP 199

Query: 82  LPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASS 141
           L  G  D++   +F  ++    + ++P  I++  G D    D L     +   +      
Sbjct: 200 LKDGIDDSSFTRLFKTIISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 259

Query: 142 IKQ 144
           +K+
Sbjct: 260 VKK 262


>Medtr4g055080.1 | histone deacetylase family protein | HC |
           chr4:20032485-20022768 | 20130731
          Length = 430

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 2/124 (1%)

Query: 24  RVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGS--YPGTGKFXXXXXXXXXXXXLNLP 81
           RV  ID DVHHG+G  +AFY    +  +S H+ G   +PGTG              +N+P
Sbjct: 165 RVLYIDIDVHHGDGVEEAFYFTDRVMTVSSHKYGDLFFPGTGDAKEIGEREGKFYAINVP 224

Query: 82  LPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANLQFTTGTYYMLASS 141
           L  G  D++   +F  ++    + ++P  I++  G D    D L     +   +      
Sbjct: 225 LKDGIDDSSFTRLFKTIISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 284

Query: 142 IKQL 145
           +K+ 
Sbjct: 285 VKKF 288