Miyakogusa Predicted Gene

Lj0g3v0177209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0177209.1 Non Characterized Hit- tr|F6GW54|F6GW54_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,68.75,2e-18,
,CUFF.11190.1
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084805.1 | hypothetical protein | HC | chr2:35973132-3597...   100   3e-22
Medtr4g055420.1 | hypothetical protein | HC | chr4:20189425-2019...    95   2e-20
Medtr5g011750.1 | hypothetical protein | HC | chr5:3424383-34232...    69   7e-13
Medtr4g102040.1 | hypothetical protein | HC | chr4:42224975-4222...    62   8e-11

>Medtr2g084805.1 | hypothetical protein | HC |
           chr2:35973132-35974624 | 20130731
          Length = 201

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/66 (68%), Positives = 54/66 (81%)

Query: 1   MRPESTVGELVAAVARQYVKEVRCSILPTNDASDFNLHYSQFSLESLHREEKLVELGSRN 60
           M+PESTVG+LV    RQY+ E R  ILP+   SDF LH+SQFSLESL+REEKLV+LGSRN
Sbjct: 78  MKPESTVGDLVETAVRQYINEARRPILPSRFGSDFELHFSQFSLESLNREEKLVKLGSRN 137

Query: 61  FFMCPR 66
           FF+CP+
Sbjct: 138 FFLCPK 143


>Medtr4g055420.1 | hypothetical protein | HC |
           chr4:20189425-20190557 | 20130731
          Length = 196

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/66 (69%), Positives = 52/66 (78%)

Query: 1   MRPESTVGELVAAVARQYVKEVRCSILPTNDASDFNLHYSQFSLESLHREEKLVELGSRN 60
           M  ESTVG+L+A   R YVKE R  ILP+ DAS F+LHYSQFSLESL R EKL E+GSRN
Sbjct: 90  MTMESTVGDLIAEAVRLYVKEGRRPILPSKDASCFDLHYSQFSLESLDRNEKLREIGSRN 149

Query: 61  FFMCPR 66
           FFMCP+
Sbjct: 150 FFMCPK 155


>Medtr5g011750.1 | hypothetical protein | HC | chr5:3424383-3423229
           | 20130731
          Length = 116

 Score = 69.3 bits (168), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 40/64 (62%)

Query: 1   MRPESTVGELVAAVARQYVKEVRCSILPTNDASDFNLHYSQFSLESLHREEKLVELGSRN 60
           M PE TVG+LV      Y KE R  +L   D + + LHYS F+LESL   EKL  LGSRN
Sbjct: 47  MLPEDTVGQLVKVALMTYDKEKRRPLLKDTDPNRYQLHYSPFTLESLKVSEKLKNLGSRN 106

Query: 61  FFMC 64
           FF+C
Sbjct: 107 FFLC 110


>Medtr4g102040.1 | hypothetical protein | HC |
           chr4:42224975-42223816 | 20130731
          Length = 172

 Score = 62.4 bits (150), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 40/61 (65%)

Query: 4   ESTVGELVAAVARQYVKEVRCSILPTNDASDFNLHYSQFSLESLHREEKLVELGSRNFFM 63
           E TV +L+ A    Y K+ R  IL   D   ++LHYSQF+ +SL R+EKLV L SRNFF+
Sbjct: 81  EDTVEDLIKAALVFYEKDKRRPILKNTDPRCYDLHYSQFTFQSLKRDEKLVGLESRNFFL 140

Query: 64  C 64
           C
Sbjct: 141 C 141