Miyakogusa Predicted Gene

Lj0g3v0176879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0176879.1 Non Characterized Hit- tr|I1ND60|I1ND60_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25612
PE,75.55,0,seg,NULL; ARATH130DUF,Protein of unknown function DUF1423,
plant; SUBFAMILY NOT NAMED,NULL; VERNALIZ,CUFF.11168.1
         (359 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086...   265   6e-71
Medtr5g097360.1 | potyviral VPg interacting protein | HC | chr5:...   224   1e-58
Medtr3g045740.1 | DUF1423 family protein | LC | chr3:14990534-14...    86   6e-17
Medtr5g006390.1 | CDPK adapter protein, putative | HC | chr5:891...    49   8e-06

>Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086502 |
            20130731
          Length = 1236

 Score =  265 bits (677), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 147/368 (39%), Positives = 202/368 (54%), Gaps = 20/368 (5%)

Query: 1    MALTFQEFTDDVVASIKEYLKNLIEIPGGKEEFVNLRNRLERRSDLTKEALLKCHKEQLE 60
            M+  F E +   +  +KE ++ L+       + +  +  L+ RSD+T + L+KCH+ QLE
Sbjct: 793  MSRKFHEMSGQYMTHMKEGIRELMLNADSHGQILAFQKILQNRSDITLDVLVKCHRVQLE 852

Query: 61   ILTAIKMRLGSFL--SGKFQFSDMVEVFLFMRCRNLNCKSLLPVDDCDCKICSGNKGFCS 118
            IL AIK  L  +L        +D+ +VFL ++CRN++C+S LPVD+CDCK+C    GFC 
Sbjct: 853  ILVAIKTGLAHYLHLGDNISSNDLAQVFLNLKCRNVSCRSQLPVDECDCKLCVQKNGFCR 912

Query: 119  SCMCPVCLSFDCASNTCSWVGCDVCSHWCHAACAIERNLIKPGPSLKGPSGTFEMQFHCV 178
             CMC VC  FD ASNT SWVGCDVC HWCH  C +  + I+ G S  G  GT EMQFHC+
Sbjct: 913  ECMCLVCSKFDNASNTVSWVGCDVCLHWCHTDCGLRESYIRNGNSTTGTKGTTEMQFHCI 972

Query: 179  GCGHPSEMFGFVKEVFLCFAKDWSLETLMKELDCVRKIFRPSKDRKGKELHIKTDDMLLK 238
             C HPSEMFGFVKEVF  FAK+WS E L KEL+ V++IF  SKD +G++LH   D ML +
Sbjct: 973  ACDHPSEMFGFVKEVFQNFAKEWSAEYLYKELEYVKRIFSASKDIRGRQLHEIADQMLPR 1032

Query: 239  LQAKLVSPRDACKYIIHFFSYXXXXXXXXXXXXXXXXXXXXQANLTMEAPPFSQSTSLKY 298
            L  K   P +  + I+ F S                      + +   A P  ++  LK 
Sbjct: 1033 LTIKSNLP-EVLRRIMSFLSDCDSSKLAMTTNFSGKEQGKENSVV---AGPSQEAAWLKS 1088

Query: 299  TY-------ELSHSKSNDLHQKDFKASMSSGLKNETDFDLDDLLRKGGLESLESIVRIKE 351
             Y       E   S      Q D +  +        +  L  + +  G + L+SI++IK 
Sbjct: 1089 IYSDKAPLLERPASILPRFDQNDKRTMVQ-------ELQLSSVQKDFGFDELDSIIKIKH 1141

Query: 352  AEARMFQT 359
            AEA+MFQT
Sbjct: 1142 AEAKMFQT 1149


>Medtr5g097360.1 | potyviral VPg interacting protein | HC |
           chr5:42645832-42649703 | 20130731
          Length = 565

 Score =  224 bits (571), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 185/354 (52%), Gaps = 14/354 (3%)

Query: 16  IKEYLKNLIEIPGG---KEEFVNLRNRLERRSDLTKEALLKCHKEQLEILTAIKMRLGSF 72
           +K  L+ ++E   G   ++EF  L+  ++ RSDLT + L++ H+ QLEIL AI   +  F
Sbjct: 115 LKTGLRVILEGGNGMQHRDEFFILQKLVQSRSDLTAKTLIRAHRVQLEILVAINTGIQGF 174

Query: 73  LSGKFQFSD--MVEVFLFMRCRNLNCKSLLPVDDCDCKICSGNKGFCSSCMCPVCLSFDC 130
           L      S   ++E+FL+ RCRN+ C++ LP DDC C+ C+ N GFC+ CMC +C  FD 
Sbjct: 175 LHPNISLSQPSLIEIFLYKRCRNIACQNQLPADDCSCETCTNNSGFCNLCMCTICSKFDF 234

Query: 131 ASNTCSWVGCDVCSHWCHAACAIERNLIKPGPSLKGPSGTFEMQFHCVGCGHPSEMFGFV 190
             NTC W+GCD+CSHW H  CAI   LI  GP +K  SG  EM F C  C   SE+ G+V
Sbjct: 235 EVNTCRWIGCDLCSHWTHTDCAIREQLICMGPPVKSGSGPSEMVFRCQSCSRTSELLGWV 294

Query: 191 KEVFLCFAKDWSLETLMKELDCVRKIFRPSKDRKGKELHIKTDDMLLKLQAKLVSPRDAC 250
           K+VF   A  W  ++LM+ELD V +IF  SKD +G  L  K DD+  KL+++ +  + AC
Sbjct: 295 KDVFQHCAPSWDGDSLMRELDFVSRIFHGSKDHRGMNLFWKCDDLKEKLKSRKMEAKAAC 354

Query: 251 KYIIHFFSYXXXXXXXXXXXXXXXXXXXXQ------ANLTMEAPPFSQSTSLKYTYELSH 304
           + I+  F                      Q      A +  EA    +        ++  
Sbjct: 355 RAILTVFQELDLDSPKSLENVESGRLIAPQEACNRIAEVVQEA---IRKMEFVADEKMRM 411

Query: 305 SKSNDLHQKDFKASMSSGLKNETDFDLDDLLRKGGLESLESIVRIKEAEARMFQ 358
            K   L  +     ++   +   +  ++   +K  +E LE IVR+K AEA MFQ
Sbjct: 412 FKKARLALEACDRELADKAREAEELKMERQKKKSQIEELERIVRLKNAEADMFQ 465


>Medtr3g045740.1 | DUF1423 family protein | LC |
           chr3:14990534-14992667 | 20130731
          Length = 170

 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 2/78 (2%)

Query: 6   QEFTDDVVASIKEYLKNLIEIPGGKEEFVNLRNRLERRSDLTKEALLKCHKEQLEILTAI 65
           +E   +VVASIK+YLKN+IE    KEE VNL+NRL+RRSDL+KE L K +K QLE L A+
Sbjct: 64  REIVKEVVASIKKYLKNMIE--NKKEELVNLQNRLKRRSDLSKETLYKGNKVQLENLVAV 121

Query: 66  KMRLGSFLSGKFQFSDMV 83
            M+L SFL G  Q S  V
Sbjct: 122 NMKLSSFLYGNLQLSKNV 139


>Medtr5g006390.1 | CDPK adapter protein, putative | HC |
           chr5:891472-894633 | 20130731
          Length = 469

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 12/142 (8%)

Query: 107 CKICSGNKGFCSSCMCPVCL-SFDCASNTCSWVGCDV------CSHWCHAACAIERNLIK 159
           C IC    GFC  C C +C  + +      S++ C V      C H  H  CA+ R+L+ 
Sbjct: 175 CDICCSESGFCRDCSCILCCKTVNSTLGGYSYIKCGVNVGEGICGHVAHVECAL-RSLLA 233

Query: 160 PGPSLKGPSGTFEMQFHCVGCGHPSEMFGFVKE-VFLCFAKDWSLETLMKELDCVRKIFR 218
                 G S   + ++HC  C   +++   V+  V +C A D + E   K LD    + R
Sbjct: 234 ---GTVGKSFGLDTEYHCRRCDGRTDLVSHVERLVEICKAVDLNDEIKKKVLDLGACLLR 290

Query: 219 PSKDRKGKELHIKTDDMLLKLQ 240
            SK    KEL  + +  + KL+
Sbjct: 291 GSKKPVAKELFNRVELAIAKLK 312