Miyakogusa Predicted Gene

Lj0g3v0176749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0176749.1 tr|D5GI94|D5GI94_TUBMM Whole genome shotgun
sequence assembly, scaffold_45, strain Mel28 OS=Tuber
me,50.57,7e-19,seg,NULL; XYLULOSE KINASE,NULL; SUGAR
KINASE,NULL,25082_g.1
         (114 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110710.1 | xylulose kinase-like protein | HC | chr3:51745...   155   5e-39
Medtr3g110710.2 | xylulose kinase-like protein | HC | chr3:51745...   155   6e-39

>Medtr3g110710.1 | xylulose kinase-like protein | HC |
           chr3:51745273-51750581 | 20130731
          Length = 557

 Score =  155 bits (393), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 79/87 (90%)

Query: 28  NSNLTIVASELVHFDSDLPHYKTKDGVCRDPSGNGRIVSPILMWVEALDLIFQKLSKSNF 87
           +SNL I+ASEL+HFDSDLPHYKTKDGV RDPS NGRIVSP LMWVEALDLIFQKLSKSN 
Sbjct: 28  DSNLNIIASELIHFDSDLPHYKTKDGVYRDPSINGRIVSPTLMWVEALDLIFQKLSKSNL 87

Query: 88  DFSKVAGVFGSGQQHGSVYWKKGSSQI 114
           DFSKV+ V GSGQQHGSVYWK GSS+I
Sbjct: 88  DFSKVSAVSGSGQQHGSVYWKNGSSKI 114


>Medtr3g110710.2 | xylulose kinase-like protein | HC |
           chr3:51745273-51750581 | 20130731
          Length = 417

 Score =  155 bits (393), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 79/87 (90%)

Query: 28  NSNLTIVASELVHFDSDLPHYKTKDGVCRDPSGNGRIVSPILMWVEALDLIFQKLSKSNF 87
           +SNL I+ASEL+HFDSDLPHYKTKDGV RDPS NGRIVSP LMWVEALDLIFQKLSKSN 
Sbjct: 28  DSNLNIIASELIHFDSDLPHYKTKDGVYRDPSINGRIVSPTLMWVEALDLIFQKLSKSNL 87

Query: 88  DFSKVAGVFGSGQQHGSVYWKKGSSQI 114
           DFSKV+ V GSGQQHGSVYWK GSS+I
Sbjct: 88  DFSKVSAVSGSGQQHGSVYWKNGSSKI 114