Miyakogusa Predicted Gene

Lj0g3v0176709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0176709.1 Non Characterized Hit- tr|G7J886|G7J886_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,95.24,0.00000000000001, ,CUFF.11143.1
         (64 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g092270.1 | transmembrane protein, putative | HC | chr3:42...    84   3e-17
Medtr2g095960.1 | Serine/Threonine-kinase rlckvii-like protein, ...    50   5e-07

>Medtr3g092270.1 | transmembrane protein, putative | HC |
          chr3:42157156-42162254 | 20130731
          Length = 66

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/42 (95%), Positives = 40/42 (95%)

Query: 1  MGYVLRVRLASFFIGAATASFAGLYILHRDYKLAHQSFTQQV 42
          MGYVLRVRLASFF GAATASFAGLYILHRDYKLAHQS TQQV
Sbjct: 1  MGYVLRVRLASFFAGAATASFAGLYILHRDYKLAHQSHTQQV 42


>Medtr2g095960.1 | Serine/Threonine-kinase rlckvii-like protein,
          putative | HC | chr2:40939301-40942575 | 20130731
          Length = 372

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/30 (73%), Positives = 27/30 (90%), Gaps = 1/30 (3%)

Query: 14 IGAATASFAGLYILHRDYKLAHQSFTQQVP 43
          +GAA A ++GLY+LHRDYKLAHQS +QQVP
Sbjct: 1  MGAAMA-WSGLYVLHRDYKLAHQSLSQQVP 29