Miyakogusa Predicted Gene

Lj0g3v0174489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0174489.1 tr|G7JDC8|G7JDC8_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_4g023430 PE=4 SV=1,46.75,0.0000000002,no
description,NULL; F-box domain,F-box domain, cyclin-like; A Receptor
for Ubiquitination Targets,F,CUFF.10973.1
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g023430.1 | galactose oxidase | LC | chr4:7903222-7905210 ...    55   3e-08
Medtr4g023090.1 | galactose oxidase | LC | chr4:7774369-7773209 ...    52   2e-07
Medtr5g070088.1 | F-box protein interaction domain protein | LC ...    52   3e-07
Medtr1g055135.1 | galactose oxidase | LC | chr1:24309570-2431113...    50   6e-07
Medtr1g055135.2 | galactose oxidase | LC | chr1:24309570-2431241...    50   6e-07
Medtr4g109280.1 | F-box protein interaction domain protein | LC ...    50   7e-07
Medtr5g070130.1 | F-box protein interaction domain protein | LC ...    50   7e-07
Medtr4g023380.1 | F-box protein interaction domain protein | LC ...    50   7e-07
Medtr4g023120.1 | F-box protein interaction domain protein | LC ...    50   8e-07
Medtr5g070080.1 | F-box protein interaction domain protein | LC ...    50   1e-06
Medtr3g103020.1 | galactose oxidase | HC | chr3:47452814-4745113...    50   1e-06
Medtr8g013010.1 | F-box protein interaction domain protein | LC ...    49   1e-06
Medtr4g117810.1 | F-box protein interaction domain protein | LC ...    49   1e-06
Medtr4g117770.1 | F-box protein interaction domain protein | LC ...    49   1e-06
Medtr4g023070.1 | F-box protein interaction domain protein | LC ...    49   2e-06
Medtr0627s0010.1 | F-box protein interaction domain protein | LC...    49   2e-06
Medtr1g055165.1 | F-box protein interaction domain protein | LC ...    48   3e-06
Medtr0242s0060.1 | F-box protein interaction domain protein | HC...    48   3e-06
Medtr0242s0040.1 | F-box protein interaction domain protein | HC...    48   3e-06
Medtr4g117750.1 | F-box protein interaction domain protein | LC ...    48   3e-06
Medtr3g036430.1 | F-box protein interaction domain protein | LC ...    48   3e-06
Medtr3g034130.1 | galactose oxidase | LC | chr3:11006623-1100504...    48   4e-06
Medtr1g097490.1 | F-box protein interaction domain protein | LC ...    48   4e-06
Medtr4g021785.1 | F-box protein interaction domain protein | LC ...    47   4e-06
Medtr4g116330.2 | F-box protein interaction domain protein | LC ...    47   5e-06
Medtr4g116330.1 | F-box protein interaction domain protein | LC ...    47   5e-06
Medtr4g023080.1 | galactose oxidase | LC | chr4:7770963-7772027 ...    47   6e-06

>Medtr4g023430.1 | galactose oxidase | LC | chr4:7903222-7905210 |
           20130731
          Length = 222

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/33 (72%), Positives = 27/33 (81%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAA 141
           PVKS++RFK VCKLW SLISDP FA+ HFQ  A
Sbjct: 54  PVKSLIRFKCVCKLWFSLISDPHFANSHFQLTA 86


>Medtr4g023090.1 | galactose oxidase | LC | chr4:7774369-7773209 |
           20130731
          Length = 386

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           PVKS++ FK VCKLW SLISDP FA+ HFQ
Sbjct: 29  PVKSLIHFKCVCKLWFSLISDPHFANSHFQ 58


>Medtr5g070088.1 | F-box protein interaction domain protein | LC |
           chr5:29695641-29697193 | 20130731
          Length = 386

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           PVKS++RFK VCKLW SLIS P FA+ HFQ
Sbjct: 20  PVKSLIRFKCVCKLWLSLISQPHFANSHFQ 49


>Medtr1g055135.1 | galactose oxidase | LC | chr1:24309570-24311139 |
           20130731
          Length = 375

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 26/30 (86%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           PVKS++RFK+VCKLW SLISD  FA+ HFQ
Sbjct: 26  PVKSLIRFKSVCKLWFSLISDSHFANSHFQ 55


>Medtr1g055135.2 | galactose oxidase | LC | chr1:24309570-24312415 |
           20130731
          Length = 375

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 26/30 (86%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           PVKS++RFK+VCKLW SLISD  FA+ HFQ
Sbjct: 26  PVKSLIRFKSVCKLWFSLISDSHFANSHFQ 55


>Medtr4g109280.1 | F-box protein interaction domain protein | LC |
           chr4:45372690-45370154 | 20130731
          Length = 359

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           PVKS++RFK VCK W S+ISDP FA+ HFQ
Sbjct: 21  PVKSLIRFKCVCKSWFSIISDPHFANSHFQ 50


>Medtr5g070130.1 | F-box protein interaction domain protein | LC |
           chr5:29713004-29711723 | 20130731
          Length = 388

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 26/35 (74%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAAPS 143
           PVKS++RFK VCKLW SLIS   FA+ HFQ  A +
Sbjct: 24  PVKSLIRFKCVCKLWFSLISQSDFANSHFQLTAKT 58


>Medtr4g023380.1 | F-box protein interaction domain protein | LC |
           chr4:7877258-7879021 | 20130731
          Length = 379

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/29 (72%), Positives = 25/29 (86%)

Query: 110 VKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           VKS++RFK +CKLW SLISDP FA+ HFQ
Sbjct: 30  VKSLIRFKCICKLWFSLISDPNFANSHFQ 58


>Medtr4g023120.1 | F-box protein interaction domain protein | LC |
           chr4:7786020-7787132 | 20130731
          Length = 370

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           PVKS++ FK VCKLW S+ISDP FA+ HFQ
Sbjct: 16  PVKSLILFKCVCKLWISIISDPQFANSHFQ 45


>Medtr5g070080.1 | F-box protein interaction domain protein | LC |
           chr5:29687571-29689028 | 20130731
          Length = 386

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 25/33 (75%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAA 141
           PVKS++RFK VCK W SLIS P FA+ HFQ  A
Sbjct: 23  PVKSLIRFKCVCKSWFSLISQPHFANSHFQLTA 55


>Medtr3g103020.1 | galactose oxidase | HC | chr3:47452814-47451137 |
           20130731
          Length = 378

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 25/33 (75%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAA 141
           PVKS+VRFK + K W SLISDPLFA  HF+  A
Sbjct: 33  PVKSLVRFKCISKSWFSLISDPLFAKTHFELTA 65


>Medtr8g013010.1 | F-box protein interaction domain protein | LC |
           chr8:4032570-4031623 | 20130731
          Length = 315

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 25/30 (83%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           P+KS++RFK VCK W +LISDP FA+ HFQ
Sbjct: 67  PMKSLIRFKCVCKSWLTLISDPHFANSHFQ 96


>Medtr4g117810.1 | F-box protein interaction domain protein | LC |
           chr4:48885781-48886884 | 20130731
          Length = 367

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAAPS 143
           PV S++RFK VCK W  LISDPLFA+ HF   A +
Sbjct: 24  PVNSLIRFKCVCKSWFFLISDPLFANSHFHLTAAT 58


>Medtr4g117770.1 | F-box protein interaction domain protein | LC |
           chr4:48870095-48871198 | 20130731
          Length = 367

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAAPS 143
           PV S++RFK VCK W  LISDPLFA+ HF   A +
Sbjct: 24  PVNSLIRFKCVCKSWFFLISDPLFANSHFHLTAAT 58


>Medtr4g023070.1 | F-box protein interaction domain protein | LC |
           chr4:7765116-7766573 | 20130731
          Length = 373

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 25/30 (83%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           PVKS++ FK +CKLW S+ISDP FA+ HFQ
Sbjct: 16  PVKSLLVFKCICKLWFSIISDPHFANSHFQ 45


>Medtr0627s0010.1 | F-box protein interaction domain protein | LC |
           scaffold0627:5865-4575 | 20130731
          Length = 419

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 29/36 (80%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAAPSL 144
           P+KS++  K VCK+W+++IS+P FA LHF+R+  SL
Sbjct: 51  PIKSLLICKCVCKIWKAMISEPHFAKLHFERSPISL 86


>Medtr1g055165.1 | F-box protein interaction domain protein | LC |
           chr1:24339939-24341078 | 20130731
          Length = 318

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAAPS 143
           PVKS++RFK+VCK W SLISD  FA+ HFQ  A +
Sbjct: 23  PVKSLIRFKSVCKSWFSLISDNHFANSHFQVTAAT 57


>Medtr0242s0060.1 | F-box protein interaction domain protein | HC |
           scaffold0242:23586-22283 | 20130731
          Length = 419

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 25/33 (75%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAA 141
           PVKS+VRFK V K W++LISDP F  LH  R++
Sbjct: 22  PVKSLVRFKCVNKAWKTLISDPTFVKLHLNRSS 54


>Medtr0242s0040.1 | F-box protein interaction domain protein | HC |
           scaffold0242:14764-13360 | 20130731
          Length = 419

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 25/33 (75%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAA 141
           PVKS+VRFK V K W++LISDP F  LH  R++
Sbjct: 22  PVKSLVRFKCVNKAWKTLISDPTFVKLHLNRSS 54


>Medtr4g117750.1 | F-box protein interaction domain protein | LC |
           chr4:48862818-48864913 | 20130731
          Length = 485

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 27/36 (75%), Gaps = 1/36 (2%)

Query: 109 PVKSIVRFKAVCKLWRSLIS-DPLFASLHFQRAAPS 143
           PVKS++RFK VCK W SLIS DP FA+ HFQ  A +
Sbjct: 16  PVKSLIRFKCVCKSWFSLISHDPHFANSHFQLTAAT 51


>Medtr3g036430.1 | F-box protein interaction domain protein | LC |
           chr3:13525727-13526877 | 20130731
          Length = 345

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 26/35 (74%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAAPS 143
           PVKS+++F+ VCK W+SLISDP FA  H   AA S
Sbjct: 33  PVKSLLQFRCVCKSWKSLISDPKFAKKHLHMAALS 67


>Medtr3g034130.1 | galactose oxidase | LC | chr3:11006623-11005048 |
           20130731
          Length = 370

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 23/30 (76%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQ 138
           PVKS++RFK VCK W +LISDP FA  HF 
Sbjct: 22  PVKSLIRFKCVCKSWLTLISDPHFAKSHFD 51


>Medtr1g097490.1 | F-box protein interaction domain protein | LC |
           chr1:43987150-43985975 | 20130731
          Length = 391

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/29 (62%), Positives = 25/29 (86%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHF 137
           PVKS+++FK +CK W++LISDP FA+ HF
Sbjct: 62  PVKSLLQFKCICKSWKTLISDPQFANNHF 90


>Medtr4g021785.1 | F-box protein interaction domain protein | LC |
           chr4:7238239-7237172 | 20130731
          Length = 355

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 26/35 (74%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAAPS 143
           PVKS++ FK VCK W SLISDP FA+ HFQ  + +
Sbjct: 22  PVKSLICFKCVCKSWFSLISDPHFANSHFQHTSAT 56


>Medtr4g116330.2 | F-box protein interaction domain protein | LC |
           chr4:48157030-48152078 | 20130731
          Length = 341

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 25/33 (75%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAA 141
           PVKS++RFK VCK W SLISD  FA+ HFQ  A
Sbjct: 36  PVKSLLRFKCVCKSWFSLISDTHFANSHFQITA 68


>Medtr4g116330.1 | F-box protein interaction domain protein | LC |
           chr4:48157043-48152078 | 20130731
          Length = 380

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 25/33 (75%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAA 141
           PVKS++RFK VCK W SLISD  FA+ HFQ  A
Sbjct: 36  PVKSLLRFKCVCKSWFSLISDTHFANSHFQITA 68


>Medtr4g023080.1 | galactose oxidase | LC | chr4:7770963-7772027 |
           20130731
          Length = 354

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 26/35 (74%)

Query: 109 PVKSIVRFKAVCKLWRSLISDPLFASLHFQRAAPS 143
           PVKS++ FK VCK W SLISDP F + HFQ A+ +
Sbjct: 22  PVKSLICFKCVCKSWFSLISDPHFENSHFQLASAT 56