Miyakogusa Predicted Gene

Lj0g3v0174309.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0174309.1 Non Characterized Hit- tr|E1ZUF8|E1ZUF8_CHLVA
Putative uncharacterized protein (Fragment)
OS=Chlorel,56.41,2e-17,DUF2358,Protein of unknown function DUF2358;
SUBFAMILY NOT NAMED,NULL; G-PROTEIN COUPLED RECEPTOR,NU,CUFF.10961.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g028425.1 | DUF2358 family protein | HC | chr8:10757503-10...   390   e-109
Medtr8g046460.1 | plant/F3O9-12 protein | HC | chr8:18640978-186...   208   3e-54
Medtr2g064370.1 | plant/F3O9-12 protein | HC | chr2:27285981-272...   196   2e-50

>Medtr8g028425.1 | DUF2358 family protein | HC |
           chr8:10757503-10760632 | 20130731
          Length = 254

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/255 (78%), Positives = 222/255 (87%), Gaps = 5/255 (1%)

Query: 1   MALLVHSPEVYVVAQSAYKPNPKLTKPHSFKPY---KAIGTKRGVKIPCAVKDFSVLEDL 57
           M LL+HSPE++V  Q A  PNP   K H+FKPY    AIG+K  VKI C VKDF+VLE L
Sbjct: 1   MTLLIHSPEIHVTPQFAQNPNPNSRKLHNFKPYAKLNAIGSKNRVKISCDVKDFAVLE-L 59

Query: 58  GLDQNVNSYGQFSVPLEQGSRPSKEEAEEKQNYYVNLGYAIRTLREEFPDLFYKELSFDI 117
           GLD+NV  YGQFSVP++ GS+ SKEE EEKQNYY+N+GYAIRTLREEFPDLFYKELSFDI
Sbjct: 60  GLDRNVKQYGQFSVPVKSGSKSSKEEEEEKQNYYLNMGYAIRTLREEFPDLFYKELSFDI 119

Query: 118 YRDDIVLKDPLNTFIGIENYKSVFWALRFHGRLFFKALWIDISSMSQPVENVIMVRWTVH 177
           YRDDIVLKDPLNTF+GIENYKS+FW LRFHG++FFKALWIDI+S+ QPVENVIMVRWTVH
Sbjct: 120 YRDDIVLKDPLNTFMGIENYKSIFWNLRFHGKIFFKALWIDINSVWQPVENVIMVRWTVH 179

Query: 178 GIPRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIALNSPHSRFKVLGVEELIKSLGCPS 237
           GIPRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIA N P  RFKV+ VEELI+SLGCP 
Sbjct: 180 GIPRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIAFNKP-PRFKVMAVEELIQSLGCPQ 238

Query: 238 TPRPTYFEISSSSQR 252
           TP PTYFEISSS++R
Sbjct: 239 TPGPTYFEISSSTKR 253


>Medtr8g046460.1 | plant/F3O9-12 protein | HC |
           chr8:18640978-18639241 | 20130731
          Length = 268

 Score =  208 bits (530), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 92/184 (50%), Positives = 130/184 (70%), Gaps = 6/184 (3%)

Query: 64  NSYGQFSVPLEQGSRP----SKEEAEEKQNYYVNLGYAIRTLREEFPDLFYKELSFDIYR 119
           +S   F+  + Q + P     K+   +K  +Y+NLG A+RTLRE+ P +F K+L++DIYR
Sbjct: 48  SSVESFTAQVAQVNSPLATQDKQNQHQKDEFYLNLGVAVRTLREDMPLIFVKDLNYDIYR 107

Query: 120 DDIVLKDPLNTFIGIENYKSVFWALRFHGRLFFKALWIDISSMSQPVENVIMVRWTVHGI 179
           DD+   DPLNTF GIE YK +FWALRFHGR+ F+ + +D+  + QP ENVI++RW + G+
Sbjct: 108 DDVTFLDPLNTFTGIEKYKLIFWALRFHGRILFREIGLDVYRIWQPSENVILIRWNLRGV 167

Query: 180 PRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIALNSPHSRFKVLGVEELIKSLGCPSTP 239
           PRVPWE++G F GTS YKLD+ GKIYEH+VDN+A N P    K + V +L+ +  CP++P
Sbjct: 168 PRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQKMMKPVSVLDLVTA--CPASP 225

Query: 240 RPTY 243
            PT+
Sbjct: 226 NPTF 229


>Medtr2g064370.1 | plant/F3O9-12 protein | HC |
           chr2:27285981-27284294 | 20130731
          Length = 288

 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/170 (52%), Positives = 123/170 (72%), Gaps = 7/170 (4%)

Query: 79  PSKEEAEEKQ----NYYVNLGYAIRTLREEFPDLFYKELSFDIYRDDIVLKDPLNTFIGI 134
           PS ++  ++Q     +YVNLG A+RTLRE+ P +F K+L++DIYRDDI   D LNTF GI
Sbjct: 63  PSVQDKHQQQLPKDEFYVNLGLAVRTLREDMPMIFIKDLNYDIYRDDITFLDSLNTFTGI 122

Query: 135 ENYKSVFWALRFHGRLFFKALWIDISSMSQPVENVIMVRWTVHGIPRVPWESRGRFDGTS 194
           E YK +FWALRFHG+L F  + +D+  + QP +NVI +RW + G+PRVPWE++G F GTS
Sbjct: 123 EKYKLIFWALRFHGKLLFHDIALDVYRVWQPSKNVIWIRWNLKGVPRVPWEAKGEFQGTS 182

Query: 195 EYKLDKQGKIYEHRVDNIALNSPHSRFKVLGVEELIKSLGCPSTPRPTYF 244
           +YKLDK GKIYEH+VDN+A N P +  K + V + + S  CP++P PT+ 
Sbjct: 183 KYKLDKNGKIYEHKVDNLAFNFPKN-IKPVSVLDFVTS--CPASPNPTFL 229