Miyakogusa Predicted Gene
- Lj0g3v0174309.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0174309.1 Non Characterized Hit- tr|E1ZUF8|E1ZUF8_CHLVA
Putative uncharacterized protein (Fragment)
OS=Chlorel,56.41,2e-17,DUF2358,Protein of unknown function DUF2358;
SUBFAMILY NOT NAMED,NULL; G-PROTEIN COUPLED RECEPTOR,NU,CUFF.10961.1
(253 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g028425.1 | DUF2358 family protein | HC | chr8:10757503-10... 390 e-109
Medtr8g046460.1 | plant/F3O9-12 protein | HC | chr8:18640978-186... 208 3e-54
Medtr2g064370.1 | plant/F3O9-12 protein | HC | chr2:27285981-272... 196 2e-50
>Medtr8g028425.1 | DUF2358 family protein | HC |
chr8:10757503-10760632 | 20130731
Length = 254
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/255 (78%), Positives = 222/255 (87%), Gaps = 5/255 (1%)
Query: 1 MALLVHSPEVYVVAQSAYKPNPKLTKPHSFKPY---KAIGTKRGVKIPCAVKDFSVLEDL 57
M LL+HSPE++V Q A PNP K H+FKPY AIG+K VKI C VKDF+VLE L
Sbjct: 1 MTLLIHSPEIHVTPQFAQNPNPNSRKLHNFKPYAKLNAIGSKNRVKISCDVKDFAVLE-L 59
Query: 58 GLDQNVNSYGQFSVPLEQGSRPSKEEAEEKQNYYVNLGYAIRTLREEFPDLFYKELSFDI 117
GLD+NV YGQFSVP++ GS+ SKEE EEKQNYY+N+GYAIRTLREEFPDLFYKELSFDI
Sbjct: 60 GLDRNVKQYGQFSVPVKSGSKSSKEEEEEKQNYYLNMGYAIRTLREEFPDLFYKELSFDI 119
Query: 118 YRDDIVLKDPLNTFIGIENYKSVFWALRFHGRLFFKALWIDISSMSQPVENVIMVRWTVH 177
YRDDIVLKDPLNTF+GIENYKS+FW LRFHG++FFKALWIDI+S+ QPVENVIMVRWTVH
Sbjct: 120 YRDDIVLKDPLNTFMGIENYKSIFWNLRFHGKIFFKALWIDINSVWQPVENVIMVRWTVH 179
Query: 178 GIPRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIALNSPHSRFKVLGVEELIKSLGCPS 237
GIPRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIA N P RFKV+ VEELI+SLGCP
Sbjct: 180 GIPRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIAFNKP-PRFKVMAVEELIQSLGCPQ 238
Query: 238 TPRPTYFEISSSSQR 252
TP PTYFEISSS++R
Sbjct: 239 TPGPTYFEISSSTKR 253
>Medtr8g046460.1 | plant/F3O9-12 protein | HC |
chr8:18640978-18639241 | 20130731
Length = 268
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 64 NSYGQFSVPLEQGSRP----SKEEAEEKQNYYVNLGYAIRTLREEFPDLFYKELSFDIYR 119
+S F+ + Q + P K+ +K +Y+NLG A+RTLRE+ P +F K+L++DIYR
Sbjct: 48 SSVESFTAQVAQVNSPLATQDKQNQHQKDEFYLNLGVAVRTLREDMPLIFVKDLNYDIYR 107
Query: 120 DDIVLKDPLNTFIGIENYKSVFWALRFHGRLFFKALWIDISSMSQPVENVIMVRWTVHGI 179
DD+ DPLNTF GIE YK +FWALRFHGR+ F+ + +D+ + QP ENVI++RW + G+
Sbjct: 108 DDVTFLDPLNTFTGIEKYKLIFWALRFHGRILFREIGLDVYRIWQPSENVILIRWNLRGV 167
Query: 180 PRVPWESRGRFDGTSEYKLDKQGKIYEHRVDNIALNSPHSRFKVLGVEELIKSLGCPSTP 239
PRVPWE++G F GTS YKLD+ GKIYEH+VDN+A N P K + V +L+ + CP++P
Sbjct: 168 PRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQKMMKPVSVLDLVTA--CPASP 225
Query: 240 RPTY 243
PT+
Sbjct: 226 NPTF 229
>Medtr2g064370.1 | plant/F3O9-12 protein | HC |
chr2:27285981-27284294 | 20130731
Length = 288
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 123/170 (72%), Gaps = 7/170 (4%)
Query: 79 PSKEEAEEKQ----NYYVNLGYAIRTLREEFPDLFYKELSFDIYRDDIVLKDPLNTFIGI 134
PS ++ ++Q +YVNLG A+RTLRE+ P +F K+L++DIYRDDI D LNTF GI
Sbjct: 63 PSVQDKHQQQLPKDEFYVNLGLAVRTLREDMPMIFIKDLNYDIYRDDITFLDSLNTFTGI 122
Query: 135 ENYKSVFWALRFHGRLFFKALWIDISSMSQPVENVIMVRWTVHGIPRVPWESRGRFDGTS 194
E YK +FWALRFHG+L F + +D+ + QP +NVI +RW + G+PRVPWE++G F GTS
Sbjct: 123 EKYKLIFWALRFHGKLLFHDIALDVYRVWQPSKNVIWIRWNLKGVPRVPWEAKGEFQGTS 182
Query: 195 EYKLDKQGKIYEHRVDNIALNSPHSRFKVLGVEELIKSLGCPSTPRPTYF 244
+YKLDK GKIYEH+VDN+A N P + K + V + + S CP++P PT+
Sbjct: 183 KYKLDKNGKIYEHKVDNLAFNFPKN-IKPVSVLDFVTS--CPASPNPTFL 229