Miyakogusa Predicted Gene

Lj0g3v0174279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0174279.1 tr|B9N5N6|B9N5N6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_582565 PE=4 SV=1,65.97,0,no
description,NULL; no description,BolA protein; BOLA-LIKE PROTEIN
CGI-143,NULL; BOLA-LIKE PROTEIN-,CUFF.10945.1
         (358 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g047990.2 | Fe-S metabolism associated protein SufE | HC |...   492   e-139
Medtr1g047990.1 | Fe-S metabolism associated protein SufE | HC |...   492   e-139
Medtr1g047990.3 | Fe-S metabolism associated protein SufE | HC |...   492   e-139
Medtr6g079650.1 | UV-induced protein uvi31 | HC | chr6:29053437-...   115   9e-26
Medtr4g104680.1 | quinolinate synthetase A protein | HC | chr4:4...    87   2e-17
Medtr3g086590.1 | Fe-S metabolism associated domain protein | HC...    82   7e-16
Medtr1g040145.1 | BolA family transcriptional regulator | HC | c...    55   1e-07
Medtr8g092690.1 | BolA family transcriptional regulator | HC | c...    51   2e-06

>Medtr1g047990.2 | Fe-S metabolism associated protein SufE | HC |
           chr1:18150454-18156048 | 20130731
          Length = 353

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 260/370 (70%), Positives = 291/370 (78%), Gaps = 34/370 (9%)

Query: 1   MSTSSICSCSFRLVATRIPVSLYDKTPLFKTSTFL---TKSIFSIKPITFQRIXXXXXXX 57
           MST+S+ SCSFRL +T+  +SL++K    K STF    T S+FS KPITFQ +       
Sbjct: 2   MSTNSLSSCSFRLFSTKFSLSLFNK----KNSTFFIKPTNSLFSFKPITFQSLPTKPQPP 57

Query: 58  XXXXXXXXXXXLQPIEELPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKE 117
                      LQPIEELPPKLQEIV LFQSVQEPKAKYEQLLFYGKNLKPL+SQFK+K+
Sbjct: 58  SSSSSPPPSTSLQPIEELPPKLQEIVNLFQSVQEPKAKYEQLLFYGKNLKPLESQFKTKD 117

Query: 118 NKVEGCVSQVWVRAYLDQEKNVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRVTPDFA 177
           NKVEGCVSQVWVRAYLD +KNVVYEADSDSVLTKGLAALLVQG SGRPV E+IRVTPDF 
Sbjct: 118 NKVEGCVSQVWVRAYLDGDKNVVYEADSDSVLTKGLAALLVQGFSGRPVNEIIRVTPDFV 177

Query: 178 VLLGLQQSLTPSRNNGFLNMLRLMQKKALMLYVEDEKG-AELNSPGNSEVKDDSFVENSS 236
           + LGLQQSLTPSRNNGFLNML+LMQKKALMLYVE EKG +E +S GNS++K+DSFVENSS
Sbjct: 178 MHLGLQQSLTPSRNNGFLNMLKLMQKKALMLYVEAEKGTSESDSIGNSDLKNDSFVENSS 237

Query: 237 G---------GHSSEIDNSETXXXXXXXXXXXXXXDGGELGGRGRRIKEKMEKELNPVEL 287
           G            SE+D+                    ELGGRG+RIK+K+EKEL P+EL
Sbjct: 238 GPSVTPSLGVDFGSEVDDENV-----------------ELGGRGKRIKKKLEKELQPIEL 280

Query: 288 QVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLVKRHRLIYSLLQEELQSGLHAL 347
           +VEDVSYQHAGHAGVRGSDGETHFN+KVVS EF+GKSLVKRHRLIYSLLQ+EL SGLHAL
Sbjct: 281 EVEDVSYQHAGHAGVRGSDGETHFNVKVVSKEFQGKSLVKRHRLIYSLLQDELDSGLHAL 340

Query: 348 SIVAKTPSEV 357
           SIVAKTPSEV
Sbjct: 341 SIVAKTPSEV 350


>Medtr1g047990.1 | Fe-S metabolism associated protein SufE | HC |
           chr1:18150508-18156040 | 20130731
          Length = 353

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 260/370 (70%), Positives = 291/370 (78%), Gaps = 34/370 (9%)

Query: 1   MSTSSICSCSFRLVATRIPVSLYDKTPLFKTSTFL---TKSIFSIKPITFQRIXXXXXXX 57
           MST+S+ SCSFRL +T+  +SL++K    K STF    T S+FS KPITFQ +       
Sbjct: 2   MSTNSLSSCSFRLFSTKFSLSLFNK----KNSTFFIKPTNSLFSFKPITFQSLPTKPQPP 57

Query: 58  XXXXXXXXXXXLQPIEELPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKE 117
                      LQPIEELPPKLQEIV LFQSVQEPKAKYEQLLFYGKNLKPL+SQFK+K+
Sbjct: 58  SSSSSPPPSTSLQPIEELPPKLQEIVNLFQSVQEPKAKYEQLLFYGKNLKPLESQFKTKD 117

Query: 118 NKVEGCVSQVWVRAYLDQEKNVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRVTPDFA 177
           NKVEGCVSQVWVRAYLD +KNVVYEADSDSVLTKGLAALLVQG SGRPV E+IRVTPDF 
Sbjct: 118 NKVEGCVSQVWVRAYLDGDKNVVYEADSDSVLTKGLAALLVQGFSGRPVNEIIRVTPDFV 177

Query: 178 VLLGLQQSLTPSRNNGFLNMLRLMQKKALMLYVEDEKG-AELNSPGNSEVKDDSFVENSS 236
           + LGLQQSLTPSRNNGFLNML+LMQKKALMLYVE EKG +E +S GNS++K+DSFVENSS
Sbjct: 178 MHLGLQQSLTPSRNNGFLNMLKLMQKKALMLYVEAEKGTSESDSIGNSDLKNDSFVENSS 237

Query: 237 G---------GHSSEIDNSETXXXXXXXXXXXXXXDGGELGGRGRRIKEKMEKELNPVEL 287
           G            SE+D+                    ELGGRG+RIK+K+EKEL P+EL
Sbjct: 238 GPSVTPSLGVDFGSEVDDENV-----------------ELGGRGKRIKKKLEKELQPIEL 280

Query: 288 QVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLVKRHRLIYSLLQEELQSGLHAL 347
           +VEDVSYQHAGHAGVRGSDGETHFN+KVVS EF+GKSLVKRHRLIYSLLQ+EL SGLHAL
Sbjct: 281 EVEDVSYQHAGHAGVRGSDGETHFNVKVVSKEFQGKSLVKRHRLIYSLLQDELDSGLHAL 340

Query: 348 SIVAKTPSEV 357
           SIVAKTPSEV
Sbjct: 341 SIVAKTPSEV 350


>Medtr1g047990.3 | Fe-S metabolism associated protein SufE | HC |
           chr1:18150502-18157210 | 20130731
          Length = 353

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 260/370 (70%), Positives = 291/370 (78%), Gaps = 34/370 (9%)

Query: 1   MSTSSICSCSFRLVATRIPVSLYDKTPLFKTSTFL---TKSIFSIKPITFQRIXXXXXXX 57
           MST+S+ SCSFRL +T+  +SL++K    K STF    T S+FS KPITFQ +       
Sbjct: 2   MSTNSLSSCSFRLFSTKFSLSLFNK----KNSTFFIKPTNSLFSFKPITFQSLPTKPQPP 57

Query: 58  XXXXXXXXXXXLQPIEELPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKE 117
                      LQPIEELPPKLQEIV LFQSVQEPKAKYEQLLFYGKNLKPL+SQFK+K+
Sbjct: 58  SSSSSPPPSTSLQPIEELPPKLQEIVNLFQSVQEPKAKYEQLLFYGKNLKPLESQFKTKD 117

Query: 118 NKVEGCVSQVWVRAYLDQEKNVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRVTPDFA 177
           NKVEGCVSQVWVRAYLD +KNVVYEADSDSVLTKGLAALLVQG SGRPV E+IRVTPDF 
Sbjct: 118 NKVEGCVSQVWVRAYLDGDKNVVYEADSDSVLTKGLAALLVQGFSGRPVNEIIRVTPDFV 177

Query: 178 VLLGLQQSLTPSRNNGFLNMLRLMQKKALMLYVEDEKG-AELNSPGNSEVKDDSFVENSS 236
           + LGLQQSLTPSRNNGFLNML+LMQKKALMLYVE EKG +E +S GNS++K+DSFVENSS
Sbjct: 178 MHLGLQQSLTPSRNNGFLNMLKLMQKKALMLYVEAEKGTSESDSIGNSDLKNDSFVENSS 237

Query: 237 G---------GHSSEIDNSETXXXXXXXXXXXXXXDGGELGGRGRRIKEKMEKELNPVEL 287
           G            SE+D+                    ELGGRG+RIK+K+EKEL P+EL
Sbjct: 238 GPSVTPSLGVDFGSEVDDENV-----------------ELGGRGKRIKKKLEKELQPIEL 280

Query: 288 QVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLVKRHRLIYSLLQEELQSGLHAL 347
           +VEDVSYQHAGHAGVRGSDGETHFN+KVVS EF+GKSLVKRHRLIYSLLQ+EL SGLHAL
Sbjct: 281 EVEDVSYQHAGHAGVRGSDGETHFNVKVVSKEFQGKSLVKRHRLIYSLLQDELDSGLHAL 340

Query: 348 SIVAKTPSEV 357
           SIVAKTPSEV
Sbjct: 341 SIVAKTPSEV 350


>Medtr6g079650.1 | UV-induced protein uvi31 | HC |
           chr6:29053437-29053120 | 20130731
          Length = 105

 Score =  115 bits (287), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 74/93 (79%), Gaps = 1/93 (1%)

Query: 267 LGGRGRRIKEKMEKELNPVELQVEDVSYQHAGHAGVR-GSDGETHFNLKVVSAEFEGKSL 325
           L  R  RI+ K++  L+   ++++DVSYQHAGHA ++  S+ ETHFNLK+VS +FEG +L
Sbjct: 9   LLSRATRIQTKLQSSLSATVIELDDVSYQHAGHAAMKESSEQETHFNLKIVSEKFEGVNL 68

Query: 326 VKRHRLIYSLLQEELQSGLHALSIVAKTPSEVS 358
           VKRHR++Y +L +EL+SGLHALSI+AKTP E++
Sbjct: 69  VKRHRMVYEVLDDELKSGLHALSIIAKTPKEIT 101


>Medtr4g104680.1 | quinolinate synthetase A protein | HC |
           chr4:43367242-43373257 | 20130731
          Length = 686

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 5/164 (3%)

Query: 76  PPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKENKVEGCVSQVWVRAYLDQ 135
           P KL  + + F+S+QEP  + ++LL Y +   P++   +   N+V GC ++VWV   +D 
Sbjct: 56  PLKLLGLAEEFRSLQEPADRMKRLLHYAELTPPMEETARVDRNRVMGCTARVWVEVKIDG 115

Query: 136 EKNVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRVTPDFAVLLGLQQSLTP---SRNN 192
           E  V   ADSDS +TKG  A LV  L G   +EV++V+ +   L+GL   L     SR N
Sbjct: 116 EGKVRLTADSDSEITKGFCACLVWVLDGLEPEEVVKVSTED--LVGLNVGLPGTGRSRVN 173

Query: 193 GFLNMLRLMQKKALMLYVEDEKGAELNSPGNSEVKDDSFVENSS 236
            + N+L  MQKK   L  E E   +     +  V DD  V   S
Sbjct: 174 TWHNVLVTMQKKTKQLVAEREGKLKFEPFPSLIVTDDGVVPKGS 217


>Medtr3g086590.1 | Fe-S metabolism associated domain protein | HC |
           chr3:39249088-39250371 | 20130731
          Length = 194

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 2/128 (1%)

Query: 78  KLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKENKVEGCVSQVWVRAYLDQEK 137
           KL  +   F S+ EP  + ++LL Y   L PLD   +  EN+V GC + VWV A++D+ +
Sbjct: 61  KLNNLTIEFSSLSEPIDRVKRLLHYASLLPPLDRSDRVPENRVTGCSTDVWVVAHIDKGR 120

Query: 138 NVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRVTPDFAVLL--GLQQSLTPSRNNGFL 195
            + ++ADSDS ++KG    LV    G   +EV+ V  D  V +  GL      SR N + 
Sbjct: 121 RMRFQADSDSEISKGFCWCLVWMFDGAEPEEVLNVEKDVLVGMNVGLNNVKARSRINTWH 180

Query: 196 NMLRLMQK 203
           N+   MQK
Sbjct: 181 NVFFAMQK 188


>Medtr1g040145.1 | BolA family transcriptional regulator | HC |
           chr1:14730710-14735741 | 20130731
          Length = 163

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 13/86 (15%)

Query: 274 IKEKMEKELNPVELQVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLVKRHRLIY 333
           +++K++++LN   + V+D +Y           DG  H ++ VVS  FEG+S V R R++Y
Sbjct: 87  MQQKIKEQLNAEAVSVKD-AY----------GDGR-HVSIDVVSTAFEGQSAVNRQRMVY 134

Query: 334 SLLQEELQSGLHALS-IVAKTPSEVS 358
             + EELQS +HA+  +  KTP+E +
Sbjct: 135 KAIWEELQSAVHAVDQMTTKTPAEAA 160


>Medtr8g092690.1 | BolA family transcriptional regulator | HC |
           chr8:38789029-38787063 | 20130731
          Length = 93

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 13/89 (14%)

Query: 267 LGGRGRRIKEKMEKELNPVELQVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLV 326
           +G    +++  +  +LNP  L+V D+S       G  GS     F +++VS +FEGK L+
Sbjct: 1   MGVTKEQVESSLNSKLNPSHLEVTDIS-------GGCGSS----FAVEIVSEQFEGKRLL 49

Query: 327 KRHRLIYSLLQEELQSGLHALSI-VAKTP 354
           +RHR++ + L+EE++  +HALS+  A TP
Sbjct: 50  ERHRMVNAALEEEMKE-IHALSVKKAVTP 77