Miyakogusa Predicted Gene

Lj0g3v0174029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0174029.1 gi|3695062|gb|AF064789.1|.path2.1
         (411 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g089500.1 | Rac GTPase activating protein | HC | chr1:3999...   456   e-128
Medtr7g107560.1 | Rac GTPase activating protein | HC | chr7:4387...   456   e-128
Medtr8g026680.1 | Rac GTPase activating protein | HC | chr8:9249...   331   1e-90
Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   326   3e-89
Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   320   2e-87
Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   315   4e-86
Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   248   6e-66
Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   187   1e-47

>Medtr1g089500.1 | Rac GTPase activating protein | HC |
           chr1:39993064-39989777 | 20130731
          Length = 483

 Score =  456 bits (1174), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/447 (55%), Positives = 284/447 (63%), Gaps = 47/447 (10%)

Query: 1   MVGWRVDSP-ADVISAVHPMEIGWPTNVKHVTLVTFDRFNGFLGLPLELEVHXXXXXXXX 59
           MV  RVD P  +VIS VH MEIGWPT+V+H+T VTFDRFNGFLGLP+E EV         
Sbjct: 48  MVACRVDRPDHEVISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSA 107

Query: 60  XXXXXXXXXXXMQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRD 119
                      MQCSYDSKGNSVPTIL+LMQ+RLYSQGGL AEGIFRINPEN +EEH+R+
Sbjct: 108 SVSVFGVSAESMQCSYDSKGNSVPTILMLMQDRLYSQGGLKAEGIFRINPENSKEEHVRN 167

Query: 120 QLNRGVVPDNIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTE 179
           QLN G+VPD+IDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEE ++LVKQLKPTE
Sbjct: 168 QLNSGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESIELVKQLKPTE 227

Query: 180 LALLNWALDLMADVVEEEEHNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI 239
            ALL+WA+DLMADVV+EEE NKM+ARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI
Sbjct: 228 SALLSWAIDLMADVVQEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI 287

Query: 240 LKTLSEREEATTAGYXXXXXXXXXXXXEDEYDSQLEMYT--------------------- 278
           +KTL EREE  T GY            EDEYDSQ E  T                     
Sbjct: 288 MKTLREREETATGGYSPMSFRTSFRRSEDEYDSQRETATGGYSPMSFRSSYRPSEDEYDS 347

Query: 279 ------SAELRGSQSDCDDHVXXXXXXXXXXXXXXXXXXXXXCFLKQLNENKQGGFAEEP 332
                 S+ELR ++SD DDH                      CFLK+L+E+ +  F+EEP
Sbjct: 348 QREIDASSELRRTKSDFDDHA-HYRNSSQEELEAESLSEIEDCFLKKLDEHTK-EFSEEP 405

Query: 333 --------ARSTCSGYNLESAVSFTDAKPDNSCSSSYEDDXXXXXXXXXXXXXXXXXXXX 384
                   +   C  Y++E AV  TD++   SC S   +                     
Sbjct: 406 ESYLQEYVSSKNCCDYSVEPAVPITDSEIVKSCLSFDREKFNADTTIPLRLGWTD----- 460

Query: 385 XTYCTNDVEMMDKFADCVSLVPLFASS 411
               T DVEM+DKF D VS VP   SS
Sbjct: 461 ----TEDVEMIDKFTDSVSPVPRLTSS 483


>Medtr7g107560.1 | Rac GTPase activating protein | HC |
           chr7:43875012-43878185 | 20130731
          Length = 435

 Score =  456 bits (1173), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/413 (62%), Positives = 287/413 (69%), Gaps = 20/413 (4%)

Query: 1   MVGWRVDSPADVISAVH-PMEIGWPTNVKHVTLVTFDRFNGFLGLPLELEVHXXXXXXXX 59
           MV   V+SP DVISAVH PMEIGWPTNVKHV  VTFDRFNGFLGLPLELEVH        
Sbjct: 41  MVACSVESPDDVISAVHHPMEIGWPTNVKHVNHVTFDRFNGFLGLPLELEVHVPAPVPSA 100

Query: 60  XXXXXXXXXXXMQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRD 119
                      MQCSYDSKGNSVPTILLLMQERLYSQGGL AEGIFRINPENG+EEHLR+
Sbjct: 101 SVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLRE 160

Query: 120 QLNRGVVPDNIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTE 179
           QLN G+VP++IDVHCLAGLIKAWFRELPSGVLDGLSPE+VLECNTEEE V+LVKQLKP E
Sbjct: 161 QLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEESVELVKQLKPVE 220

Query: 180 LALLNWALDLMADVVEEEEHNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI 239
            ALLNWA+DLMADVV EEE NKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI
Sbjct: 221 SALLNWAVDLMADVVVEEECNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLI 280

Query: 240 LKTLSEREEATTAGYXXXXXXXXXXXXEDEYDSQLEMYTSAELRGSQSDCDDHVXXXXXX 299
           LKTL +REE  TA Y             DEYDSQ EMYTS EL+ ++ D DDHV      
Sbjct: 281 LKTLRDREETATAEYSSMSSHSS-----DEYDSQQEMYTSGELKRTKLDYDDHV---DYS 332

Query: 300 XXXXXXXXXXXXXXXCFLKQLNENKQGGFA-EEPARSTCSGYNLESAVSFTDAKPDNSCS 358
                          CFL+QL++ +   F  E+PA       +L+  +       D+  S
Sbjct: 333 HNIEEAASALSEIEECFLEQLDDVQTKRFTKEKPAE------HLQEELESPTKTEDSCLS 386

Query: 359 SSYEDDXXXXXXXXXXXXXXXXXXXXXTYCTNDVEMMDKFADCVSLVPLFASS 411
           SSY +                      +  TNDVEM+DKF+D +SL+PLFAS+
Sbjct: 387 SSYRNG----STTTEGSNADTSSPSIESKNTNDVEMVDKFSDSISLLPLFASN 435


>Medtr8g026680.1 | Rac GTPase activating protein | HC |
           chr8:9249397-9245785 | 20130731
          Length = 492

 Score =  331 bits (848), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 156/234 (66%), Positives = 183/234 (78%)

Query: 16  VHPMEIGWPTNVKHVTLVTFDRFNGFLGLPLELEVHXXXXXXXXXXXXXXXXXXXMQCSY 75
           V  ++I WPT V+HV+ VTFDRFNGFLGLP E +                     MQCSY
Sbjct: 106 VSSLDISWPTEVRHVSHVTFDRFNGFLGLPSEFQPEVPTRVPSASVKVFGVSAKSMQCSY 165

Query: 76  DSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNIDVHCL 135
           D +GNSVPTILL MQ++LYS+GGL AEGIFRI  EN QE  +RDQLN+GVVP  IDVHCL
Sbjct: 166 DDRGNSVPTILLRMQKQLYSEGGLKAEGIFRITAENSQEAFVRDQLNKGVVPHGIDVHCL 225

Query: 136 AGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLMADVVE 195
           +GLIKAWFRELP+GVLD L+PEQV++CNTE++   LVK L  TE ALL+WA++LMADVVE
Sbjct: 226 SGLIKAWFRELPTGVLDSLTPEQVMQCNTEDDCTNLVKLLPSTEAALLDWAINLMADVVE 285

Query: 196 EEEHNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLSEREEA 249
            E+ NKM+ARN+AMVFAPNMTQM+DPLTAL+HAVQVMN LKTLILK L EREE+
Sbjct: 286 NEQFNKMNARNVAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKMLREREES 339


>Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr7:42531591-42525668 |
           20130731
          Length = 477

 Score =  326 bits (835), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 157/233 (67%), Positives = 181/233 (77%)

Query: 19  MEIGWPTNVKHVTLVTFDRFNGFLGLPLELEVHXXXXXXXXXXXXXXXXXXXMQCSYDSK 78
           MEIGWP+NV+HV  VTFDRF+GFLGLP+E E                     MQ S+D++
Sbjct: 97  MEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPTRPPSASTSVFGVSTESMQLSFDAR 156

Query: 79  GNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNIDVHCLAGL 138
           GNSVPTILLLMQ  LY+QGGL AEGIFRIN EN QEE +R+QLNRGVVP+ IDVHCLAGL
Sbjct: 157 GNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPNGIDVHCLAGL 216

Query: 139 IKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLMADVVEEEE 198
           IKAWFRELP+G+LD LSPEQV++  TEEE  QLV+ L  TE ALL+WA++LMADV + E 
Sbjct: 217 IKAWFRELPTGILDPLSPEQVMQSQTEEECAQLVRLLPATESALLDWAVNLMADVAQMEH 276

Query: 199 HNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLSEREEATT 251
            NKM+ARNIAMVFAPNMT M DPLTALM+AVQVMN LKTL+  TL EREE+ T
Sbjct: 277 LNKMNARNIAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVAMTLKEREESIT 329


>Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr4:19175348-19178049 |
           20130731
          Length = 363

 Score =  320 bits (820), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 154/231 (66%), Positives = 180/231 (77%)

Query: 19  MEIGWPTNVKHVTLVTFDRFNGFLGLPLELEVHXXXXXXXXXXXXXXXXXXXMQCSYDSK 78
           MEIG PTNV+H+  VTFDRFNGFLGLPLEL                      M+ SYD +
Sbjct: 92  MEIGHPTNVRHLAHVTFDRFNGFLGLPLELVPQVPTTPPSASATVFGVSTESMKLSYDRR 151

Query: 79  GNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNIDVHCLAGL 138
           GN VPTILLL+QE LY+QGGL AEGIFRIN +N QEE+LRDQLN+GVVP++IDVHCLAGL
Sbjct: 152 GNIVPTILLLIQEHLYAQGGLQAEGIFRINADNRQEEYLRDQLNKGVVPEDIDVHCLAGL 211

Query: 139 IKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLMADVVEEEE 198
           IKAWFRELP GVLD LSPEQV+ C TEE+  +L+ QL  TE +LLNW ++LMADVV+EE 
Sbjct: 212 IKAWFRELPRGVLDSLSPEQVMTCQTEEDCAELMSQLPHTEASLLNWTINLMADVVQEEH 271

Query: 199 HNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLSEREEA 249
            NKM+ARNIAMVFAPNMT+M+DPLTA M+AVQVMN LKTL+  TL ER ++
Sbjct: 272 LNKMNARNIAMVFAPNMTRMADPLTAFMYAVQVMNFLKTLVSMTLKERNDS 322


>Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr2:36405412-36408662 |
           20130731
          Length = 451

 Score =  315 bits (808), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/231 (66%), Positives = 179/231 (77%)

Query: 19  MEIGWPTNVKHVTLVTFDRFNGFLGLPLELEVHXXXXXXXXXXXXXXXXXXXMQCSYDSK 78
           M+I  PTNV+HV  VTFDRFNGFLGLP E E                     MQ SYDS+
Sbjct: 73  MDISPPTNVRHVAHVTFDRFNGFLGLPDEFEPDFPRRPPSASATVFGVSTESMQLSYDSR 132

Query: 79  GNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNIDVHCLAGL 138
           GNSVPTILLLMQ  LY Q GL  EGIFRIN +N QEEH+R+QLN G+VP++IDVHCLAGL
Sbjct: 133 GNSVPTILLLMQRHLYVQEGLQVEGIFRINADNSQEEHVRNQLNMGLVPEDIDVHCLAGL 192

Query: 139 IKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLMADVVEEEE 198
           IKAWFRELPSGVLD LS EQV++C TEE+ ++LV+ L   E ALL+WA++LMADVVE E 
Sbjct: 193 IKAWFRELPSGVLDSLSQEQVMQCQTEEDCIELVRHLPHAEAALLDWAINLMADVVEHEN 252

Query: 199 HNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLSEREEA 249
            NKM+ARNIAMVFAPNMTQM+DP TALM+AVQVMN LKTLIL+TL ER+++
Sbjct: 253 LNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLKTLILRTLRERKDS 303


>Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr7:31295617-31296762 |
           20130731
          Length = 182

 Score =  248 bits (634), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 121/147 (82%), Positives = 132/147 (89%), Gaps = 2/147 (1%)

Query: 71  MQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNI 130
           MQCSYDSKGNSVP ILLLMQERLYSQG    +GIF IN ENG+EEHLR+Q N G+VP +I
Sbjct: 27  MQCSYDSKGNSVPAILLLMQERLYSQG--RTKGIFCINLENGEEEHLREQFNSGIVPIDI 84

Query: 131 DVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLM 190
           DVHCLAGLIKAWFRELPSGVLDGLSPE+VLECNTEEEFV+LVK LKP E ALLNWA+DLM
Sbjct: 85  DVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEEFVELVKLLKPVESALLNWAVDLM 144

Query: 191 ADVVEEEEHNKMDARNIAMVFAPNMTQ 217
           ADVV EEE+NK++A NIAMVFAPNMTQ
Sbjct: 145 ADVVVEEEYNKLNAINIAMVFAPNMTQ 171


>Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr5:27034836-27036920 |
           20130731
          Length = 238

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 111/141 (78%), Gaps = 4/141 (2%)

Query: 71  MQCSYDSKGNSVPTILLLMQERLYSQGGLMAEGIFRINPENGQEEHLRDQLNRGVVPDNI 130
           M+ SYD +GN VPTILLLMQE LY+QGGL AEGIFRIN +N QEE+ RD+LN+GVVP++I
Sbjct: 59  MKLSYDRRGNIVPTILLLMQEHLYAQGGLQAEGIFRINADNRQEEYHRDELNKGVVPEDI 118

Query: 131 DVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEEFVQLVKQLKPTELALLNWALDLM 190
           DVHCL GLIK   +    GVLD LSPEQV++C TEE+  +L   L  TE +LLNW ++LM
Sbjct: 119 DVHCLTGLIKGATK----GVLDSLSPEQVMQCQTEEDCAELASHLPHTEASLLNWTINLM 174

Query: 191 ADVVEEEEHNKMDARNIAMVF 211
           ADVV+EE  NKM+A NIAMVF
Sbjct: 175 ADVVQEEHLNKMNACNIAMVF 195