Miyakogusa Predicted Gene

Lj0g3v0173849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0173849.1 tr|A9RXL8|A9RXL8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_179181,75.47,9e-19,ARM repeat,Armadillo-type fold;
B56,Protein phosphatase 2A, regulatory B subunit, B56;
SERINE/THREON,CUFF.10913.1
         (71 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086010.1 | protein phosphatase 2A regulatory B subunit fa...   101   2e-22
Medtr3g080070.1 | protein phosphatase 2A regulatory B subunit fa...    91   3e-19
Medtr6g022720.1 | protein phosphatase 2A regulatory B subunit fa...    90   6e-19
Medtr1g062950.1 | protein phosphatase 2A regulatory B subunit fa...    81   2e-16
Medtr3g107980.1 | protein phosphatase 2A regulatory B subunit fa...    80   5e-16
Medtr1g011460.1 | protein phosphatase 2A regulatory B subunit fa...    79   8e-16
Medtr1g111570.1 | protein phosphatase 2A regulatory B subunit fa...    79   8e-16
Medtr7g102920.1 | protein phosphatase 2A regulatory B subunit fa...    78   2e-15
Medtr4g113020.1 | protein phosphatase 2A regulatory B subunit fa...    65   2e-11
Medtr4g113020.2 | protein phosphatase 2A regulatory B subunit fa...    65   2e-11

>Medtr3g086010.1 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr3:38911759-38917112 | 20130731
          Length = 521

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%), Gaps = 1/69 (1%)

Query: 2   VMHCVYVSSIRWLKK-VFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLT 60
           V HC+     +  ++ +FLWNNDHIVNLIKQN KVIL IIFPALE+NT++HWNQAVHSLT
Sbjct: 393 VSHCLNSPHFQVAERALFLWNNDHIVNLIKQNCKVILPIIFPALERNTKTHWNQAVHSLT 452

Query: 61  LNVQKIFQD 69
           LNVQKIF D
Sbjct: 453 LNVQKIFHD 461


>Medtr3g080070.1 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr3:36215292-36210254 | 20130731
          Length = 535

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 46/55 (83%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNNDHI NLI QN KVIL IIFPALEKN R HWNQAV SLTLNV+KIF D
Sbjct: 417 RALFLWNNDHIRNLIIQNCKVILPIIFPALEKNARGHWNQAVQSLTLNVRKIFSD 471


>Medtr6g022720.1 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr6:7943105-7936585 | 20130731
          Length = 523

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 46/55 (83%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + +FLWNNDHI NLIKQN K+IL I+ PALE+N RSHWNQAV SLT+NV KIF D
Sbjct: 401 RALFLWNNDHIENLIKQNYKIILPIVLPALEQNARSHWNQAVRSLTINVSKIFSD 455


>Medtr1g062950.1 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr1:27640948-27635016 | 20130731
          Length = 486

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 43/53 (81%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIF 67
           + +FLWNN+HIV LI QNR VIL IIF A E+N  SHWNQAVH LT+NV+K+F
Sbjct: 383 RALFLWNNEHIVGLIAQNRTVILPIIFEAFERNIESHWNQAVHGLTVNVRKMF 435


>Medtr3g107980.1 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr3:49897973-49894856 | 20130731
          Length = 499

 Score = 79.7 bits (195), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 46/55 (83%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + ++LWNNDHIVNLI  NR+VIL IIFPALEKN  SHWN AV +LT NV+K+F++
Sbjct: 391 RALYLWNNDHIVNLIAHNRQVILPIIFPALEKNFHSHWNPAVLNLTHNVRKMFKE 445


>Medtr1g011460.1 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr1:2029392-2032542 | 20130731
          Length = 494

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 45/53 (84%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIF 67
           + +FLWNNDHIVNLI  NR+VIL IIFPAL+KN +SHWN AV +LT N++K+F
Sbjct: 384 RTLFLWNNDHIVNLIAHNRQVILPIIFPALDKNIKSHWNPAVVNLTHNIRKMF 436


>Medtr1g111570.1 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr1:50420260-50423814 | 20130731
          Length = 488

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 47/55 (85%)

Query: 15  KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIFQD 69
           + ++LWNN+HI++L+ QNR VIL IIF ALE NT++HWN+AVH LT N++K+FQ+
Sbjct: 383 RALYLWNNEHIISLVAQNRNVILPIIFDALESNTKNHWNRAVHGLTANLRKMFQE 437


>Medtr7g102920.1 | protein phosphatase 2A regulatory B subunit
          family protein | HC | chr7:41356506-41357478 | 20130731
          Length = 128

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 45/53 (84%)

Query: 15 KKVFLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIF 67
          + +FLWNN+HIV+LI QNR V+L IIF ALEKN +SHWN AV+ LT+NV+K+F
Sbjct: 26 RALFLWNNEHIVSLIAQNRTVVLPIIFEALEKNVQSHWNPAVNGLTVNVRKMF 78


>Medtr4g113020.1 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr4:46413162-46417272 | 20130731
          Length = 510

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 41/50 (82%)

Query: 18  FLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIF 67
            LWNN+HI+NLI QNR+VIL ++F AL  N+++HWNQAV +LT N++K+ 
Sbjct: 394 LLWNNEHILNLITQNRQVILPLVFSALVHNSQNHWNQAVLNLTQNIRKML 443


>Medtr4g113020.2 | protein phosphatase 2A regulatory B subunit
           family protein | HC | chr4:46413162-46417272 | 20130731
          Length = 510

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 41/50 (82%)

Query: 18  FLWNNDHIVNLIKQNRKVILSIIFPALEKNTRSHWNQAVHSLTLNVQKIF 67
            LWNN+HI+NLI QNR+VIL ++F AL  N+++HWNQAV +LT N++K+ 
Sbjct: 394 LLWNNEHILNLITQNRQVILPLVFSALVHNSQNHWNQAVLNLTQNIRKML 443