Miyakogusa Predicted Gene

Lj0g3v0172469.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0172469.2 tr|D7MMK0|D7MMK0_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_683728
PE,71.43,6e-16,coiled-coil,NULL; seg,NULL; TARGETING PROTEIN FOR
XKLP2,NULL; TPX2,Xklp2 targeting protein,CUFF.10841.2
         (211 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g078565.2 | targeting protein for Xklp2 protein | HC | chr...   246   9e-66
Medtr4g078565.1 | targeting protein for Xklp2 protein | HC | chr...   246   1e-65
Medtr5g459310.1 | TPX2 | HC | chr5:24465650-24465923 | 20130731        77   1e-14
Medtr1g051075.1 | TPX2 | LC | chr1:19916703-19915998 | 20130731        64   1e-10
Medtr7g013070.1 | TPX2 (targeting protein for Xklp2) family prot...    62   5e-10
Medtr6g015010.1 | TPX2 (targeting protein for Xklp2) family prot...    54   1e-07

>Medtr4g078565.2 | targeting protein for Xklp2 protein | HC |
           chr4:30365049-30359735 | 20130731
          Length = 740

 Score =  246 bits (629), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 129/200 (64%), Positives = 140/200 (70%), Gaps = 5/200 (2%)

Query: 12  AARVPKANPYPYTTDFAVIPPKPEPKHCTKPEPFQLESLVRHXXXXXXXXXXXXXXXXXX 71
           A RVPKANPYPYTTD+ VIPPKPEPK CTKPEPFQLESLVRH                  
Sbjct: 546 ATRVPKANPYPYTTDYPVIPPKPEPKQCTKPEPFQLESLVRHEEEMQREQEERLRMERQE 605

Query: 72  XXXXXFKAQPVLKEDPIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKR 131
                FKAQPVLKEDPIPVPEKVRKPLTQVQEF L L +RAVDRAQFD+KIKEKE +YKR
Sbjct: 606 AQMRKFKAQPVLKEDPIPVPEKVRKPLTQVQEFDLHLNHRAVDRAQFDQKIKEKEVVYKR 665

Query: 132 YRXXXXXXXXXXXXKALKQLRRTMVPHARPVPKFDHPFCPQKAAKEATKPKSPNXXXXXX 191
           YR            KALKQ+RRTMVPHARPVP F++PFCPQK +K  TKPKSPN      
Sbjct: 666 YREESEAARMIEEEKALKQMRRTMVPHARPVPNFNNPFCPQKTSK-TTKPKSPN----LR 720

Query: 192 XXXXXXFNGTVVSSPASNMR 211
                 FNG+  SSPA++MR
Sbjct: 721 VLQRRRFNGSTTSSPATSMR 740


>Medtr4g078565.1 | targeting protein for Xklp2 protein | HC |
           chr4:30365049-30359735 | 20130731
          Length = 747

 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 129/200 (64%), Positives = 140/200 (70%), Gaps = 5/200 (2%)

Query: 12  AARVPKANPYPYTTDFAVIPPKPEPKHCTKPEPFQLESLVRHXXXXXXXXXXXXXXXXXX 71
           A RVPKANPYPYTTD+ VIPPKPEPK CTKPEPFQLESLVRH                  
Sbjct: 553 ATRVPKANPYPYTTDYPVIPPKPEPKQCTKPEPFQLESLVRHEEEMQREQEERLRMERQE 612

Query: 72  XXXXXFKAQPVLKEDPIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKR 131
                FKAQPVLKEDPIPVPEKVRKPLTQVQEF L L +RAVDRAQFD+KIKEKE +YKR
Sbjct: 613 AQMRKFKAQPVLKEDPIPVPEKVRKPLTQVQEFDLHLNHRAVDRAQFDQKIKEKEVVYKR 672

Query: 132 YRXXXXXXXXXXXXKALKQLRRTMVPHARPVPKFDHPFCPQKAAKEATKPKSPNXXXXXX 191
           YR            KALKQ+RRTMVPHARPVP F++PFCPQK +K  TKPKSPN      
Sbjct: 673 YREESEAARMIEEEKALKQMRRTMVPHARPVPNFNNPFCPQKTSK-TTKPKSPN----LR 727

Query: 192 XXXXXXFNGTVVSSPASNMR 211
                 FNG+  SSPA++MR
Sbjct: 728 VLQRRRFNGSTTSSPATSMR 747


>Medtr5g459310.1 | TPX2 | HC | chr5:24465650-24465923 | 20130731
          Length = 63

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 38/42 (90%)

Query: 12 AARVPKANPYPYTTDFAVIPPKPEPKHCTKPEPFQLESLVRH 53
          AAR+PKANP P TTD+ VIPPKPEPKHCTKPE FQL+SL+RH
Sbjct: 12 AARLPKANPIPCTTDYVVIPPKPEPKHCTKPEGFQLQSLIRH 53


>Medtr1g051075.1 | TPX2 | LC | chr1:19916703-19915998 | 20130731
          Length = 97

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/45 (73%), Positives = 36/45 (80%), Gaps = 3/45 (6%)

Query: 12 AARVPKANPYPYTTDFAVI---PPKPEPKHCTKPEPFQLESLVRH 53
          A RVPKAN YPYTTD+ V+     KPEPKH TKPEPFQLESL+RH
Sbjct: 3  ATRVPKANLYPYTTDYPVVLKSHQKPEPKHRTKPEPFQLESLLRH 47


>Medtr7g013070.1 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr7:3709419-3713778 | 20130731
          Length = 456

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 12/106 (11%)

Query: 79  AQPVLKEDPIPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRYRXXXXX 138
           A+P +KE  IPV            +  L    RA+DRA FDE+I EK    ++Y+     
Sbjct: 336 AKPPVKEITIPV------------DLKLHTDVRALDRAGFDEQIAEKLLFIEQYKLEKER 383

Query: 139 XXXXXXXKALKQLRRTMVPHARPVPKFDHPFCPQKAAKEATKPKSP 184
                  + +K+LR+ +VP A+P+P FD PF P+++ K  T PK+P
Sbjct: 384 QQKLAEEEEIKRLRKELVPKAQPMPYFDRPFIPRRSMKCPTLPKTP 429


>Medtr6g015010.1 | TPX2 (targeting protein for Xklp2) family protein
           | HC | chr6:4857840-4861888 | 20130731
          Length = 484

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 45/74 (60%)

Query: 111 RAVDRAQFDEKIKEKETMYKRYRXXXXXXXXXXXXKALKQLRRTMVPHARPVPKFDHPFC 170
           RA+ RA+FD ++ EK ++ ++ +            + +++LR+ ++P A+P+P FD PF 
Sbjct: 385 RAIGRAEFDHQVAEKLSLIEQQKMEMERQQKLAEEEEIRRLRKELIPKAQPMPYFDRPFI 444

Query: 171 PQKAAKEATKPKSP 184
           P+++ K  T PK P
Sbjct: 445 PRRSMKNPTIPKEP 458