Miyakogusa Predicted Gene

Lj0g3v0172469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0172469.1 Non Characterized Hit- tr|D7M0D1|D7M0D1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.99,9e-18,coiled-coil,NULL; seg,NULL; TARGETING PROTEIN FOR
XKLP2,NULL; TPX2_importin,Cell cycle regulated mic,CUFF.10841.1
         (341 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g078565.2 | targeting protein for Xklp2 protein | HC | chr...   510   e-145
Medtr4g078565.1 | targeting protein for Xklp2 protein | HC | chr...   510   e-145
Medtr5g011390.1 | cell cycle regulated microtubule-associated pr...   110   2e-24
Medtr4g101890.3 | cell cycle regulated microtubule-associated pr...    94   1e-19
Medtr4g101890.1 | cell cycle regulated microtubule-associated pr...    94   1e-19
Medtr4g101890.2 | cell cycle regulated microtubule-associated pr...    94   1e-19
Medtr4g101890.4 | cell cycle regulated microtubule-associated pr...    94   2e-19
Medtr5g459310.1 | TPX2 | HC | chr5:24465650-24465923 | 20130731        77   2e-14
Medtr1g051075.1 | TPX2 | LC | chr1:19916703-19915998 | 20130731        63   3e-10

>Medtr4g078565.2 | targeting protein for Xklp2 protein | HC |
           chr4:30365049-30359735 | 20130731
          Length = 740

 Score =  510 bits (1314), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 260/341 (76%), Positives = 273/341 (80%), Gaps = 2/341 (0%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
           MMAKMPKFKAR LNKKILQT TLPPMPRSTP PPEFKEFHLETLARAHQ+ DSAS AS+E
Sbjct: 338 MMAKMPKFKARTLNKKILQTSTLPPMPRSTPQPPEFKEFHLETLARAHQNTDSASKASSE 397

Query: 61  VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
           VSHKENS KPHLTEPK P+LQTSLRARPP +KSS E+EQEELEKIPKFKARPLNKKIFES
Sbjct: 398 VSHKENSSKPHLTEPKPPLLQTSLRARPPTVKSSLEIEQEELEKIPKFKARPLNKKIFES 457

Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHNPIPRKTTP 180
           KGDIG+FCH KKHVTEPQEFHFAT+ER PPP A+ADLFDKL LKSE A N   IPR TTP
Sbjct: 458 KGDIGLFCHMKKHVTEPQEFHFATSERFPPPTAVADLFDKLSLKSEPARNT--IPRTTTP 515

Query: 181 NPFHLHTEERGAXXXXXXXXXXXXXXXXXXAARVPKANPYPYTTDFAVIPPKPEPKHCTK 240
           NPFHLHTEERGA                  A RVPKANPYPYTTD+ VIPPKPEPK CTK
Sbjct: 516 NPFHLHTEERGAEKEKKLYMELLQKELEEEATRVPKANPYPYTTDYPVIPPKPEPKQCTK 575

Query: 241 PEPFQLESLVRHXXXXXXXXXXXXXXXXXXXXXXXFKAQPVLKEDPIPVPEKVRKPLTQV 300
           PEPFQLESLVRH                       FKAQPVLKEDPIPVPEKVRKPLTQV
Sbjct: 576 PEPFQLESLVRHEEEMQREQEERLRMERQEAQMRKFKAQPVLKEDPIPVPEKVRKPLTQV 635

Query: 301 QEFSLRLTNRAVDRAQFDEKIKEKETMYKRYREESEAERMV 341
           QEF L L +RAVDRAQFD+KIKEKE +YKRYREESEA RM+
Sbjct: 636 QEFDLHLNHRAVDRAQFDQKIKEKEVVYKRYREESEAARMI 676



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 72  LTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
           LT+PK+P  +T+ R RP ++KS+ ELE+E + K+PKFKAR LNKKI ++
Sbjct: 309 LTKPKSPEFETNQRVRPARVKSAAELEEEMMAKMPKFKARTLNKKILQT 357


>Medtr4g078565.1 | targeting protein for Xklp2 protein | HC |
           chr4:30365049-30359735 | 20130731
          Length = 747

 Score =  510 bits (1313), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 260/341 (76%), Positives = 273/341 (80%), Gaps = 2/341 (0%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
           MMAKMPKFKAR LNKKILQT TLPPMPRSTP PPEFKEFHLETLARAHQ+ DSAS AS+E
Sbjct: 345 MMAKMPKFKARTLNKKILQTSTLPPMPRSTPQPPEFKEFHLETLARAHQNTDSASKASSE 404

Query: 61  VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
           VSHKENS KPHLTEPK P+LQTSLRARPP +KSS E+EQEELEKIPKFKARPLNKKIFES
Sbjct: 405 VSHKENSSKPHLTEPKPPLLQTSLRARPPTVKSSLEIEQEELEKIPKFKARPLNKKIFES 464

Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHNPIPRKTTP 180
           KGDIG+FCH KKHVTEPQEFHFAT+ER PPP A+ADLFDKL LKSE A N   IPR TTP
Sbjct: 465 KGDIGLFCHMKKHVTEPQEFHFATSERFPPPTAVADLFDKLSLKSEPARNT--IPRTTTP 522

Query: 181 NPFHLHTEERGAXXXXXXXXXXXXXXXXXXAARVPKANPYPYTTDFAVIPPKPEPKHCTK 240
           NPFHLHTEERGA                  A RVPKANPYPYTTD+ VIPPKPEPK CTK
Sbjct: 523 NPFHLHTEERGAEKEKKLYMELLQKELEEEATRVPKANPYPYTTDYPVIPPKPEPKQCTK 582

Query: 241 PEPFQLESLVRHXXXXXXXXXXXXXXXXXXXXXXXFKAQPVLKEDPIPVPEKVRKPLTQV 300
           PEPFQLESLVRH                       FKAQPVLKEDPIPVPEKVRKPLTQV
Sbjct: 583 PEPFQLESLVRHEEEMQREQEERLRMERQEAQMRKFKAQPVLKEDPIPVPEKVRKPLTQV 642

Query: 301 QEFSLRLTNRAVDRAQFDEKIKEKETMYKRYREESEAERMV 341
           QEF L L +RAVDRAQFD+KIKEKE +YKRYREESEA RM+
Sbjct: 643 QEFDLHLNHRAVDRAQFDQKIKEKEVVYKRYREESEAARMI 683



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 72  LTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
           LT+PK+P  +T+ R RP ++KS+ ELE+E + K+PKFKAR LNKKI ++
Sbjct: 316 LTKPKSPEFETNQRVRPARVKSAAELEEEMMAKMPKFKARTLNKKILQT 364


>Medtr5g011390.1 | cell cycle regulated microtubule-associated
           protein | LC | chr5:3256522-3248559 | 20130731
          Length = 777

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 105/184 (57%), Gaps = 11/184 (5%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARA--HQSADSASIAS 58
           +   +PKFKARP+N+KIL  P+LP   R+    PEF+EFHL+T  RA  H SA S+S   
Sbjct: 271 LTVAVPKFKARPVNRKILNAPSLPLHKRTPARLPEFQEFHLKTSERAMHHTSATSSSTLP 330

Query: 59  TEVSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIF 118
                K+       + P+  +  ++LR RP  + +    + + L+    FKARP NKKI 
Sbjct: 331 CNDFDKDLDKNATFSAPQNSI--SNLR-RPSVMGAP---KHDGLDYRHGFKARPFNKKIL 384

Query: 119 ESKGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHNPIPRKT 178
            SKGDIG+F + K+  T P EF+F+T +R+     I DLF+KL L S GA ++N    K 
Sbjct: 385 SSKGDIGVFRNIKQETTVPMEFNFSTEKRLQHNPPIDDLFNKLSLTS-GAQSNN--GSKV 441

Query: 179 TPNP 182
            P P
Sbjct: 442 KPGP 445


>Medtr4g101890.3 | cell cycle regulated microtubule-associated
           protein | HC | chr4:42154027-42145938 | 20130731
          Length = 431

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 89/172 (51%), Gaps = 10/172 (5%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
           M    P+FKARPLN++IL  P+LP   RSTP  PEF+EFHL+TL RA Q   SA+ AS  
Sbjct: 252 MTVAAPRFKARPLNRRILDAPSLPLPKRSTPRLPEFREFHLKTLERAIQHT-SATSASHH 310

Query: 61  VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
            +  +  W  H     T V      AR P    + + +      I  FKA+PLNKKI  +
Sbjct: 311 CNDSDKGWDQH-----TSVEHKIKDARRPTAMGAPKHDGLGFNHI--FKAQPLNKKILSN 363

Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHN 172
           K   G+  HT K   +  EF+    + I     I +LF KL L SEG  N+ 
Sbjct: 364 KEHAGVL-HTNKETADQMEFNSHAEKGIQHNLPI-ELFSKLSLTSEGQPNNG 413


>Medtr4g101890.1 | cell cycle regulated microtubule-associated
           protein | HC | chr4:42154027-42145936 | 20130731
          Length = 458

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 10/167 (5%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
           M    P+FKARPLN++IL  P+LP   RSTP  PEF+EFHL+TL RA Q   SA+ AS  
Sbjct: 252 MTVAAPRFKARPLNRRILDAPSLPLPKRSTPRLPEFREFHLKTLERAIQHT-SATSASHH 310

Query: 61  VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
            +  +  W  H     T V      AR P    + + +      I  FKA+PLNKKI  +
Sbjct: 311 CNDSDKGWDQH-----TSVEHKIKDARRPTAMGAPKHDGLGFNHI--FKAQPLNKKILSN 363

Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEG 167
           K   G+  HT K   +  EF+    + I     I +LF KL L SEG
Sbjct: 364 KEHAGVL-HTNKETADQMEFNSHAEKGIQHNLPI-ELFSKLSLTSEG 408


>Medtr4g101890.2 | cell cycle regulated microtubule-associated
           protein | HC | chr4:42154027-42145938 | 20130731
          Length = 475

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 10/167 (5%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
           M    P+FKARPLN++IL  P+LP   RSTP  PEF+EFHL+TL RA Q   SA+ AS  
Sbjct: 252 MTVAAPRFKARPLNRRILDAPSLPLPKRSTPRLPEFREFHLKTLERAIQHT-SATSASHH 310

Query: 61  VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
            +  +  W  H     T V      AR P    + + +      I  FKA+PLNKKI  +
Sbjct: 311 CNDSDKGWDQH-----TSVEHKIKDARRPTAMGAPKHDGLGFNHI--FKAQPLNKKILSN 363

Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEG 167
           K   G+  HT K   +  EF+    + I     I +LF KL L SEG
Sbjct: 364 KEHAGVL-HTNKETADQMEFNSHAEKGIQHNLPI-ELFSKLSLTSEG 408


>Medtr4g101890.4 | cell cycle regulated microtubule-associated
           protein | HC | chr4:42154027-42145938 | 20130731
          Length = 309

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 10/167 (5%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
           M    P+FKARPLN++IL  P+LP   RSTP  PEF+EFHL+TL RA Q   SA+ AS  
Sbjct: 86  MTVAAPRFKARPLNRRILDAPSLPLPKRSTPRLPEFREFHLKTLERAIQHT-SATSASHH 144

Query: 61  VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
            +  +  W  H     T V      AR P    + + +      I  FKA+PLNKKI  +
Sbjct: 145 CNDSDKGWDQH-----TSVEHKIKDARRPTAMGAPKHDGLGFNHI--FKAQPLNKKILSN 197

Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEG 167
           K   G+  HT K   +  EF+    + I     I +LF KL L SEG
Sbjct: 198 KEHAGVL-HTNKETADQMEFNSHAEKGIQHNLPI-ELFSKLSLTSEG 242


>Medtr5g459310.1 | TPX2 | HC | chr5:24465650-24465923 | 20130731
          Length = 63

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 38/42 (90%)

Query: 211 AARVPKANPYPYTTDFAVIPPKPEPKHCTKPEPFQLESLVRH 252
           AAR+PKANP P TTD+ VIPPKPEPKHCTKPE FQL+SL+RH
Sbjct: 12  AARLPKANPIPCTTDYVVIPPKPEPKHCTKPEGFQLQSLIRH 53


>Medtr1g051075.1 | TPX2 | LC | chr1:19916703-19915998 | 20130731
          Length = 97

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 211 AARVPKANPYPYTTDFAVIPP---KPEPKHCTKPEPFQLESLVRHXXXXXXXXXXXXXXX 267
           A RVPKAN YPYTTD+ V+     KPEPKH TKPEPFQLESL+RH               
Sbjct: 3   ATRVPKANLYPYTTDYPVVLKSHQKPEPKHRTKPEPFQLESLLRHKEEMQREQEERLRME 62

Query: 268 XXXXXXXXFKAQPVLKEDPIP 288
                   FKA PV K  P P
Sbjct: 63  REEAQMRKFKALPV-KRGPNP 82