Miyakogusa Predicted Gene

Lj0g3v0171049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0171049.1 tr|Q93KF0|Q93KF0_9FIRM Beta-galactosidase
OS=Caldicellulosiruptor lactoaceticus GN=lac PE=4
SV=1,52.56,2e-19,Glyco_hydro_2_N,Glycoside hydrolase, family 2,
N-terminal; SUBFAMILY NOT NAMED,NULL; BETA-GALACTOSID,CUFF.10735.1
         (169 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g039160.1 | glycoside hydrolase family 2 protein | HC | ch...   299   8e-82

>Medtr8g039160.1 | glycoside hydrolase family 2 protein | HC |
           chr8:14479426-14488265 | 20130731
          Length = 1118

 Score =  299 bits (766), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 140/167 (83%), Positives = 151/167 (90%)

Query: 1   MVASSSSSVAGPILLASQNGYKVWEDPSFIKWRKRDPHVSLHCHESVEGSLKFWYQRNKV 60
           M +S SSS+ GP+LLA  NGYKVWEDPSFIKWRKRDPHV LHCHESVEGSLK+WYQR+KV
Sbjct: 1   MASSPSSSLVGPLLLAPNNGYKVWEDPSFIKWRKRDPHVHLHCHESVEGSLKYWYQRSKV 60

Query: 61  DFLVSQSAVWNDDAVNGALDSAAFWVKDLPFVKSLSGYWKFFLASNPNNVPTEFYESEFH 120
           D+LVSQSAVW DDAVNGAL+SAAFWVKDLPFVKSLSGYWKFFLASNP NVP +F++SEF 
Sbjct: 61  DYLVSQSAVWKDDAVNGALESAAFWVKDLPFVKSLSGYWKFFLASNPCNVPAKFHDSEFQ 120

Query: 121 DSEWSALPVPSNWQLHGFDRPIYTNTEYPFPLDPPSVPEENPTGWFR 167
           DSEWS LPVPSNWQLHGFDRPIYTN  YPFPLDPP VP ENPTG +R
Sbjct: 121 DSEWSTLPVPSNWQLHGFDRPIYTNVTYPFPLDPPFVPTENPTGCYR 167