Miyakogusa Predicted Gene

Lj0g3v0170999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0170999.1 tr|E9BWJ3|E9BWJ3_CAPO3 Acyl-coenzyme A oxidase
OS=Capsaspora owczarzaki (strain ATCC 30864)
GN=CAOG_,34.39,7e-18,Acyl-CoA dehydrogenase C-terminal
domain-like,Acyl-CoA dehydrogenase/oxidase C-terminal;
ACOX,Acyl-C,CUFF.10726.1
         (174 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC | chr4:30622...   304   2e-83
Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC | chr8:38035...    49   2e-06

>Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC |
           chr4:30622603-30615873 | 20130731
          Length = 678

 Score =  304 bits (779), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 149/174 (85%), Positives = 161/174 (92%)

Query: 1   MNKPWPVIPSQLTSSAIRSSEFQIDLFHLRERDLLRRFAAEVSEYQSHGKSKESAFILSY 60
           MN   PVIPSQLTSS I+SSEFQIDLFHLRERDLL+RFAAEVSE+QS G SKESAFILSY
Sbjct: 505 MNGSCPVIPSQLTSSTIKSSEFQIDLFHLRERDLLKRFAAEVSEHQSQGNSKESAFILSY 564

Query: 61  QLAEDLGRAFSERAILKTFMEAESTLSAGSVKNVLGLLRSLYAMMCVDEDASFLRYGYLS 120
           QLAEDLGRAFSERAILKTFMEAES L AGS+K+VLGLLRSLYA++ VDEDA+FLRYGYLS
Sbjct: 565 QLAEDLGRAFSERAILKTFMEAESALPAGSLKDVLGLLRSLYALISVDEDAAFLRYGYLS 624

Query: 121 IENASAVRKEVPKLCSELRPLALALVSSFGIPDAFLSPIAYNWVDSNSWDLSQH 174
            ENASAVRKEVPKLC+ELRP ALALV+SFGIPDAFLSPIAYNWV+SNSW  +QH
Sbjct: 625 TENASAVRKEVPKLCAELRPHALALVNSFGIPDAFLSPIAYNWVESNSWSTAQH 678


>Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC |
           chr8:38035172-38040185 | 20130731
          Length = 689

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)

Query: 1   MNKPWPVIPSQLTSSAIRSSEFQIDLFHLRERDLLRRFAAEVSEY-QSHGKSKESAFILS 59
           +++P PV         +R  +FQ+D F  R   LL   A  + ++ +  G        L+
Sbjct: 513 LSQPNPVTARWEGEDHLRDPKFQLDAFRYRTSRLLHSVAVRLRKHSKPLGDFGAWNRCLN 572

Query: 60  YQLAEDLGRAFSERAILKTFMEAESTLSAGSVKNVLGLLRSLYAMMCVDED-ASFLRYGY 118
           + L   L  +  E  IL  F+EA  +    S +  L L+  LYA+  +  D  ++    Y
Sbjct: 573 HLLT--LAESHIESVILAKFIEAVQSCPDASAQAALKLVCDLYALDRIWNDIGTYRNVDY 630

Query: 119 LSIENASAVRKEVPKLCSELRPLALALVSSFGIPDAFL-SPIA 160
           ++   A A+ K    L  ++R +A  LV +F +PD    +PIA
Sbjct: 631 VAPNKAKAIHKLSEYLSFQVRNIAKELVDAFDLPDHVTRAPIA 673