Miyakogusa Predicted Gene
- Lj0g3v0169239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0169239.1 Non Characterized Hit- tr|I1N1T9|I1N1T9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=3,79.61,0,no
description,NULL; no description,Transketolase-like, C-terminal;
TRANSKETOLASE_2,Transketolase bi,gene.g12997.t1.1
(535 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g068265.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |... 891 0.0
Medtr8g068300.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |... 886 0.0
Medtr4g118640.2 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |... 757 0.0
Medtr4g118640.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |... 756 0.0
Medtr2g020590.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |... 731 0.0
Medtr4g118640.3 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |... 708 0.0
Medtr3g107740.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |... 569 e-162
Medtr3g107740.2 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |... 384 e-107
Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC | ... 67 6e-11
Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC | ... 67 6e-11
>Medtr8g068265.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
chr8:28466086-28471025 | 20130731
Length = 711
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/558 (78%), Positives = 484/558 (86%), Gaps = 24/558 (4%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
MHTI+ TSGLAGFPKRDES+HDAFGVGHSSTSISAG MAVARDLL KKN+VISVIGDGA
Sbjct: 153 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKKNSVISVIGDGA 212
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG AYEA+NNAGF+D+NLIV+LNDNKQVSLPTATLDGPATPVGALS TLSKIQAS +F
Sbjct: 213 MTAGQAYEAMNNAGFIDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLSKIQASRKF 272
Query: 119 RKIRDTAKVKHNQANRRTN--------------TPSCSKSF--------GPVDGHNIEDL 156
RK+R+ K Q +T+ + S S F GP+DGHNIEDL
Sbjct: 273 RKLREATKNITKQIGGQTHLVASKVDKYARDFISGSGSSLFEELGMYYIGPMDGHNIEDL 332
Query: 157 VLIFEKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLS 216
V IFEKVKAMP GPVLIH+VTEKGKGYPPA AAAD+MH V KFDPKTG QFKPK STL+
Sbjct: 333 VNIFEKVKAMPAPGPVLIHIVTEKGKGYPPALAAADRMHGVVKFDPKTGHQFKPKPSTLA 392
Query: 217 YNQYFAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 276
Y QYFA+SLIKEAE+D IVAIHAAMGGGTGLNYFQKRFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 452
Query: 277 ATEGFKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFM 336
A EG KPFCAI SSFLQRGYDQVVHDVDLQKLPVRFA+DR GLVG DGPTHCGAFDITFM
Sbjct: 453 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFM 512
Query: 337 ASLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKG 396
A LPNM+VMAPSDEAELM+MVATAAAIDDRPSCFRFPRGNGIGA+LPLNNKGTPLEIGKG
Sbjct: 513 ACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCFRFPRGNGIGANLPLNNKGTPLEIGKG 572
Query: 397 RILIEGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEV 456
RIL+EGSRVA+LGYG MVQ+C++AAEML+ +GVYVTVADARFCKPLDTDLI+LLA+EHE+
Sbjct: 573 RILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVYVTVADARFCKPLDTDLIRLLAREHEI 632
Query: 457 LITLEEGSIGGFASHVSQFLSISGILDGPLKWRPMMLPDKYIEHGSAQFQNEEAGLSSKH 516
LIT+EEGSIGGF SHVSQFLS++G+LDGPLK R MMLPD+YI+HG+ Q +EAGLSSKH
Sbjct: 633 LITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKH 692
Query: 517 VAATVLSLIGRAKEDLLL 534
+ ATVLSL+ KE LL
Sbjct: 693 ILATVLSLLDMPKEALLF 710
>Medtr8g068300.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
chr8:28474611-28479112 | 20130731
Length = 710
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/558 (78%), Positives = 482/558 (86%), Gaps = 24/558 (4%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
MHTI+ TSGLAGFPKRDES+HDAFGVGHSSTSISAG MA+ARDLL KKN+VISVIGDGA
Sbjct: 153 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAIARDLLGKKNSVISVIGDGA 212
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG AYEA+NNAGFLD+NLIV+LNDNKQVSLPTATLDGPATPVGALS TLSKIQAS +F
Sbjct: 213 MTAGQAYEALNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLSKIQASRKF 272
Query: 119 RKIRDTAKVKHNQANRRTN--------------TPSCSKSF--------GPVDGHNIEDL 156
RK+R+ K Q +T+ + S S F GP+DGHNIEDL
Sbjct: 273 RKLREATKNITKQIGGQTHLVASKVDKYARDFISGSGSSLFEELGMYYIGPMDGHNIEDL 332
Query: 157 VLIFEKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLS 216
V IFEKVKA P GPVLIH+VTEKGKGYPPA AAAD+MH V KFDPKTG QFKPK STL+
Sbjct: 333 VNIFEKVKATPASGPVLIHIVTEKGKGYPPAVAAADRMHGVVKFDPKTGHQFKPKPSTLA 392
Query: 217 YNQYFAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 276
Y QYFA+SLIKEAE+D IVAIHAAMGGGTGLNYFQKRFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 452
Query: 277 ATEGFKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFM 336
ATEG KPFCAI S+FLQRGYDQVVHDVDLQKLPVRFA+DR GLVG DGPTHCGAFDITFM
Sbjct: 453 ATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFM 512
Query: 337 ASLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKG 396
A LPNM+VMAPSDEAELM+MVATAAAIDDRPSCFRFPRGNGIGA LPL+NKGTPLEIGKG
Sbjct: 513 ACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCFRFPRGNGIGADLPLHNKGTPLEIGKG 572
Query: 397 RILIEGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEV 456
RIL+EGSRVA+LGYG MVQ+C++AAEML+ +GVYVTV+DARFCKPLDTDLI+LLA+EHE+
Sbjct: 573 RILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVYVTVSDARFCKPLDTDLIRLLAREHEI 632
Query: 457 LITLEEGSIGGFASHVSQFLSISGILDGPLKWRPMMLPDKYIEHGSAQFQNEEAGLSSKH 516
LIT+EEGSIGGF SHVSQFLS++G+LDGPLK R MMLPD+YI+HG+ Q +EAGLSSKH
Sbjct: 633 LITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKH 692
Query: 517 VAATVLSLIGRAKEDLLL 534
+ ATVLSL+ KE L
Sbjct: 693 ILATVLSLLEMPKEALFF 710
>Medtr4g118640.2 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
chr4:49145064-49149332 | 20130731
Length = 672
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/556 (66%), Positives = 441/556 (79%), Gaps = 24/556 (4%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
MHT++ T+GL+GF KR ES +D+FG GHSST+ISAG MAV RDL +KN+V++VIGDGA
Sbjct: 113 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGA 172
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG AYEA+NNAG+LD+++IV+LNDNKQVSLPTATLDGP PVGALS LS++Q++
Sbjct: 173 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPL 232
Query: 119 RKIRDTAK--------------VKHNQANRRTNTPSCSKSF--------GPVDGHNIEDL 156
R++R+ AK K ++ R + + S F GPVDGHNI+DL
Sbjct: 233 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDL 292
Query: 157 VLIFEKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLS 216
V I ++VK + GPVLIHV+TEKG+GYP AE AADK H VAKFDP TG+QFK + T S
Sbjct: 293 VAILKEVKTTNSTGPVLIHVITEKGRGYPYAEKAADKYHGVAKFDPPTGKQFKVAAKTQS 352
Query: 217 YNQYFAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 276
Y YFAE+LI EA+ DK+I+AIHAAMGGGTG+N F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 353 YTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGL 412
Query: 277 ATEGFKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFM 336
A EG KPFCAI SSFLQR YDQVVHDVDLQKLPVRFA+DR GLVG DGPTH G+FD+TFM
Sbjct: 413 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFM 472
Query: 337 ASLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKG 396
A LPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG LP KG PLEIGKG
Sbjct: 473 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKG 532
Query: 397 RILIEGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEV 456
RILIEG RVALLGYGS VQ CL AA +++ G+ +TVADARFCKPLD LI+ LAK HEV
Sbjct: 533 RILIEGERVALLGYGSAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEV 592
Query: 457 LITLEEGSIGGFASHVSQFLSISGILDGPLKWRPMMLPDKYIEHGSAQFQNEEAGLSSKH 516
LIT+EEGSIGGF SHV+QF+++ G+LDG LKWRP++LPD+YI+HGS Q AGL+ H
Sbjct: 593 LITVEEGSIGGFGSHVAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSH 652
Query: 517 VAATVLSLIGRAKEDL 532
+AATV +++G+ +E L
Sbjct: 653 IAATVFNILGQTREAL 668
>Medtr4g118640.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
chr4:49145064-49149426 | 20130731
Length = 717
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/556 (66%), Positives = 441/556 (79%), Gaps = 24/556 (4%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
MHT++ T+GL+GF KR ES +D+FG GHSST+ISAG MAV RDL +KN+V++VIGDGA
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGA 217
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG AYEA+NNAG+LD+++IV+LNDNKQVSLPTATLDGP PVGALS LS++Q++
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPL 277
Query: 119 RKIRDTAK--------------VKHNQANRRTNTPSCSKSF--------GPVDGHNIEDL 156
R++R+ AK K ++ R + + S F GPVDGHNI+DL
Sbjct: 278 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDL 337
Query: 157 VLIFEKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLS 216
V I ++VK + GPVLIHV+TEKG+GYP AE AADK H VAKFDP TG+QFK + T S
Sbjct: 338 VAILKEVKTTNSTGPVLIHVITEKGRGYPYAEKAADKYHGVAKFDPPTGKQFKVAAKTQS 397
Query: 217 YNQYFAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 276
Y YFAE+LI EA+ DK+I+AIHAAMGGGTG+N F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGL 457
Query: 277 ATEGFKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFM 336
A EG KPFCAI SSFLQR YDQVVHDVDLQKLPVRFA+DR GLVG DGPTH G+FD+TFM
Sbjct: 458 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFM 517
Query: 337 ASLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKG 396
A LPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG LP KG PLEIGKG
Sbjct: 518 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKG 577
Query: 397 RILIEGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEV 456
RILIEG RVALLGYGS VQ CL AA +++ G+ +TVADARFCKPLD LI+ LAK HEV
Sbjct: 578 RILIEGERVALLGYGSAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEV 637
Query: 457 LITLEEGSIGGFASHVSQFLSISGILDGPLKWRPMMLPDKYIEHGSAQFQNEEAGLSSKH 516
LIT+EEGSIGGF SHV+QF+++ G+LDG LKWRP++LPD+YI+HGS Q AGL+ H
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSH 697
Query: 517 VAATVLSLIGRAKEDL 532
+AATV +++G+ +E L
Sbjct: 698 IAATVFNILGQTREAL 713
>Medtr2g020590.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
chr2:6870248-6863032 | 20130731
Length = 718
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/552 (65%), Positives = 428/552 (77%), Gaps = 20/552 (3%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
MHT++ GL+GF KR ES D FG GHSST+ISAG MAV RDL +K+NV+++IGDGA
Sbjct: 160 MHTLRQKDGLSGFTKRSESEFDIFGTGHSSTTISAGLGMAVGRDLKGEKHNVVTIIGDGA 219
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG A+EA+NNAG+L++N+IV+LNDNKQVSLPTA LDGP PVGALSRTLS++Q++I
Sbjct: 220 MTAGQAFEAMNNAGYLNSNMIVILNDNKQVSLPTADLDGPIPPVGALSRTLSRLQSNIPL 279
Query: 119 RKIRDTAKVKHNQANRRTN----------TPSCSKSF--------GPVDGHNIEDLVLIF 160
R++R+ AK Q R + S S F GPVDGH+I+DLV I
Sbjct: 280 RELREVAKGVTKQNGRPIAKVEEYALGMISGSGSTLFEELGLDYIGPVDGHSIDDLVAIL 339
Query: 161 EKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLSYNQY 220
++VK+ GPVLIHVVTEKG GY AE AADK H VAKFDP TG+QFK K+ T
Sbjct: 340 KQVKSPKKTGPVLIHVVTEKGLGYSYAEKAADKYHGVAKFDPATGKQFKTKAPTPVLTSC 399
Query: 221 FAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLATEG 280
F ++LI EAE DK IV IHAAMGGGTG+N+F +RFP RCFDVGIAEQHAVTFAAGLA EG
Sbjct: 400 FVDALIAEAEADKGIVGIHAAMGGGTGMNHFLRRFPTRCFDVGIAEQHAVTFAAGLACEG 459
Query: 281 FKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFMASLP 340
KPFCAI SSFLQR YDQVVHDVDLQKLPVRF +D+ G VG DGPTHCG+FD+T+MA LP
Sbjct: 460 LKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFVIDKAGFVGEDGPTHCGSFDVTYMACLP 519
Query: 341 NMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILI 400
NMVVMAPSDEAE++HMVATA AI+DRPSCFRFPR NG G LP N+G P+EIGKGRILI
Sbjct: 520 NMVVMAPSDEAEIIHMVATAVAINDRPSCFRFPRANGTGVELPPGNRGIPMEIGKGRILI 579
Query: 401 EGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEVLITL 460
EG RVALLG+G+ VQ C+ AA ML+ G+ VTVADARFCKPLD LI+ LAK HEVLIT+
Sbjct: 580 EGERVALLGFGTAVQNCVAAASMLEDHGLRVTVADARFCKPLDHSLIRSLAKSHEVLITV 639
Query: 461 EEGSIGGFASHVSQFLSISGILDGPLKWRPMMLPDKYIEHGSAQFQNEEAGLSSKHVAAT 520
EEGSIGGF SHV+QF+++ G+LDG LKWRPM+ PD YI+HGS Q AGL+S H+AAT
Sbjct: 640 EEGSIGGFGSHVAQFMALDGLLDGKLKWRPMVFPDIYIDHGSPAEQLAVAGLTSSHIAAT 699
Query: 521 VLSLIGRAKEDL 532
V +++G+ +E L
Sbjct: 700 VFNILGQTREAL 711
>Medtr4g118640.3 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
chr4:49145064-49148819 | 20130731
Length = 678
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/518 (67%), Positives = 409/518 (78%), Gaps = 24/518 (4%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
MHT++ T+GL+GF KR ES +D+FG GHSST+ISAG MAV RDL +KN+V++VIGDGA
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGA 217
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
MTAG AYEA+NNAG+LD+++IV+LNDNKQVSLPTATLDGP PVGALS LS++Q++
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPL 277
Query: 119 RKIRDTAK--------------VKHNQANRRTNTPSCSKSF--------GPVDGHNIEDL 156
R++R+ AK K ++ R + + S F GPVDGHNI+DL
Sbjct: 278 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDL 337
Query: 157 VLIFEKVKAMPTLGPVLIHVVTEKGKGYPPAEAAADKMHNVAKFDPKTGRQFKPKSSTLS 216
V I ++VK + GPVLIHV+TEKG+GYP AE AADK H VAKFDP TG+QFK + T S
Sbjct: 338 VAILKEVKTTNSTGPVLIHVITEKGRGYPYAEKAADKYHGVAKFDPPTGKQFKVAAKTQS 397
Query: 217 YNQYFAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 276
Y YFAE+LI EA+ DK+I+AIHAAMGGGTG+N F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGL 457
Query: 277 ATEGFKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAFDITFM 336
A EG KPFCAI SSFLQR YDQVVHDVDLQKLPVRFA+DR GLVG DGPTH G+FD+TFM
Sbjct: 458 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFM 517
Query: 337 ASLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKG 396
A LPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG LP KG PLEIGKG
Sbjct: 518 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKG 577
Query: 397 RILIEGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEV 456
RILIEG RVALLGYGS VQ CL AA +++ G+ +TVADARFCKPLD LI+ LAK HEV
Sbjct: 578 RILIEGERVALLGYGSAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEV 637
Query: 457 LITLEEGSIGGFASHVSQFLSISGILDGPLKWRPMMLP 494
LIT+EEGSIGGF SHV+QF+++ G+LDG LK R P
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALDGLLDGNLKVRKQTSP 675
>Medtr3g107740.1 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
chr3:49718037-49711963 | 20130731
Length = 708
Score = 569 bits (1466), Expect = e-162, Method: Compositional matrix adjust.
Identities = 295/561 (52%), Positives = 379/561 (67%), Gaps = 38/561 (6%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
M TI+ +GL+GF R ES +DAFG GH SISAG MAVARD+ ++ V++VI +
Sbjct: 152 MKTIRKKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRRERVVAVISNWT 211
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
+G YEA++NAG+LD+NL+V+LND++ LP DG T V ALS TLS++Q+S F
Sbjct: 212 TMSGQVYEAMSNAGYLDSNLVVILNDSRHSLLPKIE-DGSKTSVNALSSTLSRLQSSKSF 270
Query: 119 RKIRDTAK--------------VKHNQANRRTNTPSCSKSF--------GPVDGHNIEDL 156
RK R+ AK K ++ R P S F GPVDGHNIEDL
Sbjct: 271 RKFREAAKGVTKRIGRGMHELAAKVDEYARGMMGPPGSTLFEELGLYYIGPVDGHNIEDL 330
Query: 157 VLIFEKVKAMPTLGPVLIHVVTEKGK--GYPPAEAAADKMHNVA-KFD--PKTGRQFKPK 211
+ + ++V ++ ++GPVLIHV+T + + + DK + + FD GR
Sbjct: 331 ISVLQEVASLDSMGPVLIHVITNENQVEEHNKKSYMTDKQQDESVSFDLLDNAGR----- 385
Query: 212 SSTLSYNQYFAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVT 271
+Y F ESL+ EAE DK+IV +HA + L F ++FP+R F+VGIAEQHAVT
Sbjct: 386 --LQTYGDCFVESLVAEAEKDKDIVVVHAGITTEPSLKLFMEKFPDRIFNVGIAEQHAVT 443
Query: 272 FAAGLATEGFKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAF 331
FA+GL+ G KPFC I SSFLQR YDQVVHDVD QK+PVRF + GLVG DGP CGAF
Sbjct: 444 FASGLSCGGLKPFCIIPSSFLQRAYDQVVHDVDQQKVPVRFVITSAGLVGSDGPLQCGAF 503
Query: 332 DITFMASLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPL 391
DITFM+ LPNM+VMAPSDEAEL+HMVATAA I+D+P CFR+PRG +G + + G P+
Sbjct: 504 DITFMSCLPNMIVMAPSDEAELVHMVATAAHINDQPVCFRYPRGALVGKDEAILD-GIPI 562
Query: 392 EIGKGRILIEGSRVALLGYGSMVQRCLQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLA 451
EIGKGRIL+EG VALLGYGSMVQ CL+A +L +G+ VTVADARFCKPLD +L++ L
Sbjct: 563 EIGKGRILVEGKDVALLGYGSMVQNCLKAYSLLANLGIEVTVADARFCKPLDIELLRQLC 622
Query: 452 KEHEVLITLEEGSIGGFASHVSQFLSISGILDGPLKWRPMMLPDKYIEHGSAQFQNEEAG 511
K H LIT+EEGSIGGF SHV+QF+++ G+LD +KWRP++LPD YIEH S Q +AG
Sbjct: 623 KHHSFLITVEEGSIGGFGSHVAQFIALDGLLDRRIKWRPIVLPDSYIEHASPNQQLNQAG 682
Query: 512 LSSKHVAATVLSLIGRAKEDL 532
L+ H+AAT LSL+GR +E L
Sbjct: 683 LTGHHIAATALSLLGRTREAL 703
>Medtr3g107740.2 | 1-deoxy-D-xylulose-5-phosphate synthase | HC |
chr3:49718014-49711963 | 20130731
Length = 574
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/430 (48%), Positives = 274/430 (63%), Gaps = 38/430 (8%)
Query: 1 MHTIKMTSGLAGFPKRDESIHDAFGVGHSSTSISAG--MAVARDLLEKKNNVISVIGDGA 58
M TI+ +GL+GF R ES +DAFG GH SISAG MAVARD+ ++ V++VI +
Sbjct: 152 MKTIRKKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRRERVVAVISNWT 211
Query: 59 MTAGLAYEAINNAGFLDTNLIVVLNDNKQVSLPTATLDGPATPVGALSRTLSKIQASIEF 118
+G YEA++NAG+LD+NL+V+LND++ LP DG T V ALS TLS++Q+S F
Sbjct: 212 TMSGQVYEAMSNAGYLDSNLVVILNDSRHSLLPKIE-DGSKTSVNALSSTLSRLQSSKSF 270
Query: 119 RKIRDTAK--------------VKHNQANRRTNTPSCSKSF--------GPVDGHNIEDL 156
RK R+ AK K ++ R P S F GPVDGHNIEDL
Sbjct: 271 RKFREAAKGVTKRIGRGMHELAAKVDEYARGMMGPPGSTLFEELGLYYIGPVDGHNIEDL 330
Query: 157 VLIFEKVKAMPTLGPVLIHVVTEKGK--GYPPAEAAADKMHNVA-KFD--PKTGRQFKPK 211
+ + ++V ++ ++GPVLIHV+T + + + DK + + FD GR
Sbjct: 331 ISVLQEVASLDSMGPVLIHVITNENQVEEHNKKSYMTDKQQDESVSFDLLDNAGR----- 385
Query: 212 SSTLSYNQYFAESLIKEAEIDKNIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVT 271
+Y F ESL+ EAE DK+IV +HA + L F ++FP+R F+VGIAEQHAVT
Sbjct: 386 --LQTYGDCFVESLVAEAEKDKDIVVVHAGITTEPSLKLFMEKFPDRIFNVGIAEQHAVT 443
Query: 272 FAAGLATEGFKPFCAISSSFLQRGYDQVVHDVDLQKLPVRFAVDRGGLVGGDGPTHCGAF 331
FA+GL+ G KPFC I SSFLQR YDQVVHDVD QK+PVRF + GLVG DGP CGAF
Sbjct: 444 FASGLSCGGLKPFCIIPSSFLQRAYDQVVHDVDQQKVPVRFVITSAGLVGSDGPLQCGAF 503
Query: 332 DITFMASLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPL 391
DITFM+ LPNM+VMAPSDEAEL+HMVATAA I+D+P CFR+PRG +G + + G P+
Sbjct: 504 DITFMSCLPNMIVMAPSDEAELVHMVATAAHINDQPVCFRYPRGALVGKDEAILD-GIPI 562
Query: 392 EIGKGRILIE 401
E+ + R ++
Sbjct: 563 EVIEQRCFLD 572
>Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC |
chr7:85481-92086 | 20130731
Length = 361
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 93/226 (41%), Gaps = 17/226 (7%)
Query: 251 FQKRFPERCFDVGIAEQHAVTFAAGLATEGFKPFCA-ISSSFLQRGYDQVVHDVDLQK-- 307
+K PER D I E G A G KP ++ +F + D +++
Sbjct: 69 LEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYM 128
Query: 308 ------LPVRFAVDRGGLVG-GDGPTHCGAFDITFMASLPNMVVMAPSDEAELMHMVATA 360
+P+ F G G G +HC A ++ S P + V+AP + ++ A
Sbjct: 129 SAGQINVPIVFRGPNGAAAGVGAQHSHCYA---SWYGSCPGLKVLAPYSSEDARGLL-KA 184
Query: 361 AAIDDRPSCF---RFPRGNGIGASLPLNNKGTPLEIGKGRILIEGSRVALLGYGSMVQRC 417
A D P F G S + + L IGK +I EG V + + MV
Sbjct: 185 AIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKMVGFA 244
Query: 418 LQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEVLITLEEG 463
L+AAE L+ G+ V + R +PLD I ++ L+T+EEG
Sbjct: 245 LKAAETLEKEGISAEVINLRSIRPLDRATINASVRKTNRLVTVEEG 290
>Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC |
chr7:86084-92086 | 20130731
Length = 361
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 93/226 (41%), Gaps = 17/226 (7%)
Query: 251 FQKRFPERCFDVGIAEQHAVTFAAGLATEGFKPFCA-ISSSFLQRGYDQVVHDVDLQK-- 307
+K PER D I E G A G KP ++ +F + D +++
Sbjct: 69 LEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYM 128
Query: 308 ------LPVRFAVDRGGLVG-GDGPTHCGAFDITFMASLPNMVVMAPSDEAELMHMVATA 360
+P+ F G G G +HC A ++ S P + V+AP + ++ A
Sbjct: 129 SAGQINVPIVFRGPNGAAAGVGAQHSHCYA---SWYGSCPGLKVLAPYSSEDARGLL-KA 184
Query: 361 AAIDDRPSCF---RFPRGNGIGASLPLNNKGTPLEIGKGRILIEGSRVALLGYGSMVQRC 417
A D P F G S + + L IGK +I EG V + + MV
Sbjct: 185 AIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKMVGFA 244
Query: 418 LQAAEMLKTIGVYVTVADARFCKPLDTDLIQLLAKEHEVLITLEEG 463
L+AAE L+ G+ V + R +PLD I ++ L+T+EEG
Sbjct: 245 LKAAETLEKEGISAEVINLRSIRPLDRATINASVRKTNRLVTVEEG 290