Miyakogusa Predicted Gene

Lj0g3v0169029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0169029.1 Non Characterized Hit- tr|I3T5T3|I3T5T3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,85.71,0.0000000002,seg,NULL,CUFF.10601.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g111900.1 | plant/F25P12-18 protein | HC | chr7:45982442-4...    62   2e-10
Medtr7g103200.1 | plant/F25P12-18 protein | HC | chr7:41716977-4...    62   2e-10
Medtr1g084200.1 | plant/F25P12-18 protein | HC | chr1:37614251-3...    52   2e-07

>Medtr7g111900.1 | plant/F25P12-18 protein | HC |
          chr7:45982442-45981611 | 20130731
          Length = 170

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 33/38 (86%)

Query: 1  MSLVTEEIRGRLEICHGDALCLVKSKDLLKEIALPNGL 38
          MSLVTEEI+ + E+ HGD +C VKSK+LLKEI+LPNGL
Sbjct: 1  MSLVTEEIKSKSEVYHGDEMCQVKSKELLKEISLPNGL 38


>Medtr7g103200.1 | plant/F25P12-18 protein | HC |
          chr7:41716977-41716258 | 20130731
          Length = 152

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 33/38 (86%)

Query: 1  MSLVTEEIRGRLEICHGDALCLVKSKDLLKEIALPNGL 38
          MSLVTEEI+ + E+ HGD LC VKSK+LLKEI+LPNGL
Sbjct: 1  MSLVTEEIKSKSEVHHGDELCQVKSKELLKEISLPNGL 38


>Medtr1g084200.1 | plant/F25P12-18 protein | HC |
          chr1:37614251-37615143 | 20130731
          Length = 173

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 31/38 (81%)

Query: 1  MSLVTEEIRGRLEICHGDALCLVKSKDLLKEIALPNGL 38
          M+L+T+EIRG+ E+ +GD +C  KSK+LL EI LPNGL
Sbjct: 1  MNLLTDEIRGKSEVYNGDEICQAKSKELLLEINLPNGL 38