Miyakogusa Predicted Gene
- Lj0g3v0168529.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0168529.1 Non Characterized Hit- tr|K4DCD0|K4DCD0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.84,0.000000005,seg,NULL,CUFF.10567.1
(134 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g116500.1 | hypothetical protein | HC | chr4:48260415-4826... 92 1e-19
>Medtr4g116500.1 | hypothetical protein | HC |
chr4:48260415-48261004 | 20130731
Length = 138
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 3 EEDSTLESPXXXXXXXXXXXXXXXXXGFPNHRVRPRIARSTSL-XXXXXXXKPSRSTDFT 61
EEDSTLESP F +HRV+PRI RS+SL SRS D
Sbjct: 4 EEDSTLESPHSLKYKLKSSLCFSC--CFSHHRVKPRIVRSSSLRTHNRNHNNNSRSIDLP 61
Query: 62 HLKEKRCNFIARIGXXXXXXXSADFHYDALSYALNFDDVTSDNNRPADDIRSFSPRLPAS 121
HLKEK NFI+RI SADFHYDALSYALNF+D +D + DD+RSFS RLPAS
Sbjct: 62 HLKEKCTNFISRI-VHHRRRHSADFHYDALSYALNFEDDAND-EKSVDDLRSFSARLPAS 119
Query: 122 P 122
P
Sbjct: 120 P 120