Miyakogusa Predicted Gene

Lj0g3v0168269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0168269.1 Non Characterized Hit- tr|B9S2Q4|B9S2Q4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,27.27,1e-18,seg,NULL,CUFF.10542.1
         (331 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088975.1 | transmembrane protein, putative | HC | chr3:40...   323   2e-88
Medtr1g029440.1 | transmembrane protein, putative | HC | chr1:10...   280   1e-75
Medtr3g088965.1 | transmembrane protein, putative | LC | chr3:40...   246   3e-65
Medtr7g021620.1 | transmembrane protein, putative | HC | chr7:68...   129   3e-30
Medtr4g096890.1 | transmembrane protein, putative | HC | chr4:38...   128   6e-30
Medtr4g082350.1 | transmembrane protein, putative | HC | chr4:32...    62   8e-10

>Medtr3g088975.1 | transmembrane protein, putative | HC |
           chr3:40729182-40727803 | 20130731
          Length = 332

 Score =  323 bits (827), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 167/330 (50%), Positives = 226/330 (68%)

Query: 1   MERDQEKMQFLGFFGVFKESYMIMFSWRKXXXXXXXXXXXXXXXXXXXNMEVSQVMFGGI 60
           M+R+QE+MQFLG FG++KESY I+ SWRK                   ++++S ++F  I
Sbjct: 1   MDREQEEMQFLGLFGIYKESYKIIISWRKIFSQITLTLILPLSFIFLIHIQISNILFRKI 60

Query: 61  LFYSERISRTKFGTPHQKRLINTISIEWASFIIFKLIYFVFFLIFSLVSTSAVVHTIASI 120
           +  +  I  T+ GTP  ++L + I+ EW +F++FKL+YF   LIFSL+STSAVV+TIASI
Sbjct: 61  MNNTNEILETQQGTPQYQKLSDIITSEWTTFLLFKLVYFTSLLIFSLLSTSAVVYTIASI 120

Query: 121 YTSREVTLKKAMGAVAKVWKSLVITFLCTFAAFFIYNVVAGIVLFIWALTIGENIYGMAT 180
           YT+REVT K+  G V KVWK L++TFLCTF AFF+YN +A +V  IWAL+I     G+A 
Sbjct: 121 YTAREVTFKRVFGVVPKVWKRLMVTFLCTFFAFFVYNTLAILVFIIWALSINYKSGGVAI 180

Query: 181 LLVIGILYIVGFIYLAAVWQLANVVSMLEDSSGIKAMMKSNELIKGKKGLSLIITFMLSV 240
           L++IGILY VG +YL  +WQLA+VV++LEDS G KAMMKSN LIKGK GLS +I   L+V
Sbjct: 181 LVIIGILYFVGILYLTIIWQLASVVTVLEDSYGFKAMMKSNNLIKGKIGLSTLIFLKLNV 240

Query: 241 FFFLIQFLFSMVLLRLFHVGLVWKIASGVXXXXXXXXXXXXXXVIQTVLYFDCKSYHHEI 300
            FF IQFLF+ ++++ + + LV + A G+              VIQTVLYF CKSYHH+ 
Sbjct: 241 SFFGIQFLFTKLVVKAWGLTLVDRTAYGILCFVLLSHLFLFGLVIQTVLYFVCKSYHHQS 300

Query: 301 IGKSALSEQLEVYQGEHELVKATGVPQDSH 330
           I KSALS+ LEVY GE+E +K   V  +++
Sbjct: 301 IDKSALSDHLEVYHGEYEPLKDKDVQLENY 330


>Medtr1g029440.1 | transmembrane protein, putative | HC |
           chr1:10107059-10108491 | 20130731
          Length = 333

 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 152/331 (45%), Positives = 214/331 (64%), Gaps = 1/331 (0%)

Query: 1   MERDQEKMQFLGFFGVFKESYMIMFSWRKXXXXXXXXXXXXXXXXXXXNMEVSQVMFGGI 60
           M+++QE MQFLGFFG +KES+ I+FSWRK                   ++EVS ++F  I
Sbjct: 1   MDKEQEDMQFLGFFGCYKESFKIIFSWRKIFTQITLTLLLPLSFIFLFHIEVSNLIFKKI 60

Query: 61  LFYSERISRTKFGTPHQKRLINTISIEWASFIIFKLIYFVFFLIFSLVSTSAVVHTIASI 120
               E+I  T+ GTP  ++L + IS ++ + ++FKL+YF F LIFSL+STSA+V+T ASI
Sbjct: 61  QHTEEQIDHTQQGTPKYEKLTDIISSQFITLLLFKLVYFTFLLIFSLLSTSAIVYTTASI 120

Query: 121 YTSREVTLKKAMGAVAKVWKSLVITFLCTFAAFFIYNVVAGIVLFIWALTIGENIYGMAT 180
           +TS++V+ KK M  V KVWK L+ITFLC +AAFF YN +   V+ + A+TI     G+  
Sbjct: 121 FTSKDVSFKKVMKIVPKVWKRLMITFLCAYAAFFAYNFITFFVIILLAITISIKSGGIVL 180

Query: 181 LLVIGILYIVGFIYLAAVWQLANVVSMLEDSSGIKAMMKSNELIKGKKGLSLIITFMLSV 240
           L+ I I Y +GF+YL  +WQLA+VV++LED  GIKAM+KS ELIKGK GLS+ I  +L+V
Sbjct: 181 LIFIMIFYFIGFVYLTLIWQLASVVTVLEDFYGIKAMVKSKELIKGKMGLSIFIFLVLNV 240

Query: 241 FFFLIQFLFSMVLLR-LFHVGLVWKIASGVXXXXXXXXXXXXXXVIQTVLYFDCKSYHHE 299
            F LI+ +F +V++   +  G V +   G+              V+QTVLY  CKSYHHE
Sbjct: 241 SFVLIRLVFKVVVVNGRWCFGYVDRTGYGILCFLFLSCLFLFGLVLQTVLYLVCKSYHHE 300

Query: 300 IIGKSALSEQLEVYQGEHELVKATGVPQDSH 330
            I KSAL++ LEVY GE+  + A  V  +++
Sbjct: 301 NIDKSALADHLEVYLGEYVPLTAKDVQLENY 331


>Medtr3g088965.1 | transmembrane protein, putative | LC |
           chr3:40725497-40724514 | 20130731
          Length = 327

 Score =  246 bits (627), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 198/326 (60%), Gaps = 6/326 (1%)

Query: 1   MERDQEKMQFLGFFGVFKESYMIMFSWRKXXXXXXXXXXXXXXXXXXXNMEVSQVMFGGI 60
           M  +QEKMQFLG FGV+KESY +MFSWRK                    +E+S  + G I
Sbjct: 1   MAIEQEKMQFLGLFGVYKESYKLMFSWRKLLSQITLILIIPLTFNFLIQIELSDFVLGKI 60

Query: 61  LFYSERISRTKFGTPHQKRLINTISIEWASFIIFKLIYFVFFLIFSLVSTSAVVHTIASI 120
           L +S +++     T   + L   I+ EWA F + K+ YF+      L STSA+V+T+ASI
Sbjct: 61  LHHSNQMTNHHLDTAQPQNLTEIITKEWAIFFLIKIAYFILIFSLYLFSTSAIVYTVASI 120

Query: 121 YT-SREVTLKKAMGAVAKVWKSLVITFLCTFAAFFIYNVVAGIVLFIWALTIG-ENIYGM 178
           YT ++++   K M  +  + K L++TFLCT  A F YN++A ++  I+ALT G  N   +
Sbjct: 121 YTGNKDIAFNKVMSVITNLSKRLMVTFLCTLTAGFFYNIIAMVIAIIFALTFGVRNGGSV 180

Query: 179 ATLLVIGILYIVGFIYLAAVWQLANVVSMLEDSSGIKAMMKSNELIKGKKGLSLIITFML 238
           A  ++IGILY VG +YL  VWQLANVV++LEDS G +AMMKS ELIKGK GLS+ IT   
Sbjct: 181 AGFIIIGILYFVGLVYLNVVWQLANVVTVLEDSYGFEAMMKSKELIKGKMGLSIFITLQF 240

Query: 239 SVFFFLIQFLFSMVLL---RLFHVGLVWKIASGVXXXXXXXXXXXXXXVIQTVLYFDCKS 295
           +  FF+I+FLF M+++   + F + L+ +I  G               ++QTVLYF CKS
Sbjct: 241 NFCFFVIRFLFGMLVVNGWKWFELSLMSRITIGFVCFLFLSHLFLLILIMQTVLYFVCKS 300

Query: 296 YHHEIIGKSALS-EQLEVYQGEHELV 320
           Y +E I K + S E ++V+QGE+ +V
Sbjct: 301 YQNESIDKCSPSLEHVKVHQGEYVVV 326


>Medtr7g021620.1 | transmembrane protein, putative | HC |
           chr7:6883195-6886674 | 20130731
          Length = 320

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 163/331 (49%), Gaps = 27/331 (8%)

Query: 1   MERDQEKMQFLGFFGVFKESYMIMFSWRKXXXXXXXXXXXXXXXXXXXNMEVSQVMFGGI 60
           M+  QE++QFL    + KES  I     K                      +S  +    
Sbjct: 1   MDLAQEELQFLNIPNILKESISIPKISPKTFYLITLTLI----------FPLSFAILAHS 50

Query: 61  LFYSERISR--TKFGTPHQKRLINTISIEWASFIIFKLIYFVFFLIFSLVSTSAVVHTIA 118
           LF    IS+  + F  P Q       S +W   +I +  Y +F   FSL+ST+AVV T+A
Sbjct: 51  LFTHPLISQLQSPFTDPSQT------SHDWTLLLIIQFFYLIFLFAFSLLSTAAVVFTVA 104

Query: 119 SIYTSREVTLKKAMGAVAKVWKSLVITFLCTFAAFFIYN--VVAGIVLFIWALTIGENIY 176
           S+YTS+ V+    + A+ KV+K L ITFL        YN   V  +VL + A+    ++ 
Sbjct: 105 SLYTSKPVSFSNTISAIPKVFKRLFITFLWVTLLMICYNFLFVLCLVLMVVAIDTDNSVL 164

Query: 177 GMATLLVIGILYIVGFIYLAAVWQLANVVSMLEDSSGIKAMMKSNELIKGKKGLSLIITF 236
              +++ I +L++V  +Y+ A+W LA+VVS+LE   G  AM KS EL+KG+   + ++  
Sbjct: 165 LFFSVVFIFVLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAALLVC 224

Query: 237 MLSVFFFLIQFLFSMVLLRLFH----VGLVWKIASGVXXXXXXXXXXXXXXVIQTVLYFD 292
              +   +I  +FS+V++   H     G+  +I  G               ++Q+V Y+ 
Sbjct: 225 GYLLICAVISGMFSVVVV---HGGDGYGVFSRIVIGGFLVGVLVIVNLVGLLVQSVFYYV 281

Query: 293 CKSYHHEIIGKSALSEQLEVYQGEHELVKAT 323
           CKSYHH+ I KSAL + L  Y GE+  +K++
Sbjct: 282 CKSYHHQGIDKSALHDHLGGYLGEYVPLKSS 312


>Medtr4g096890.1 | transmembrane protein, putative | HC |
           chr4:38580522-38581484 | 20130731
          Length = 320

 Score =  128 bits (322), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 160/331 (48%), Gaps = 27/331 (8%)

Query: 1   MERDQEKMQFLGFFGVFKESYMIMFSWRKXXXXXXXXXXXXXXXXXXXNMEVSQVMFGGI 60
           M+   E++QFL    + KES  I     K                      +S  +    
Sbjct: 1   MDLAPEELQFLNIPNILKESISIPKISPKTFYLITLILI----------FPLSFAILAHS 50

Query: 61  LFYSERISR--TKFGTPHQKRLINTISIEWASFIIFKLIYFVFFLIFSLVSTSAVVHTIA 118
           LF    IS   + F  P Q       S +W   +I +  Y +F   FSL+ST+AVV T+A
Sbjct: 51  LFTHPLISHIESPFTDPAQT------SHDWTLLLIIQFFYLIFLFAFSLLSTAAVVFTVA 104

Query: 119 SIYTSREVTLKKAMGAVAKVWKSLVITFLCTFAAFFIYNVV--AGIVLFIWALTIGENIY 176
           S+YTS+ V+    + A+  V+K L ITFL      F YN V    +VL + A+    ++ 
Sbjct: 105 SLYTSKPVSFSNTISAIPNVFKRLFITFLWVTLLMFCYNFVFILCLVLMVIAVDTDNSVL 164

Query: 177 GMATLLVIGILYIVGFIYLAAVWQLANVVSMLEDSSGIKAMMKSNELIKGKKGLSLIITF 236
              ++++I +L++V  +Y+ A+W LA+VVS+LE   G  AM KS EL+KG+   +   + 
Sbjct: 165 LFFSVVLIFVLFLVVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYA---SL 221

Query: 237 MLSVFFFLIQFLFSMVLLRLFHVGLVWKIAS----GVXXXXXXXXXXXXXXVIQTVLYFD 292
           ++  + FL   +  M  + + H G  + + S    G               ++Q+V Y+ 
Sbjct: 222 LVCGYLFLCAVISGMFSVIVVHGGDGYDVFSRIFIGGFLVGVLVIVNLVGLLVQSVFYYV 281

Query: 293 CKSYHHEIIGKSALSEQLEVYQGEHELVKAT 323
           CKSYHH+ I KSAL + L  Y GE+  +K++
Sbjct: 282 CKSYHHQEIDKSALHDHLGGYLGEYVPLKSS 312


>Medtr4g082350.1 | transmembrane protein, putative | HC |
           chr4:32077565-32075769 | 20130731
          Length = 358

 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 7/232 (3%)

Query: 73  GTPHQKRLINTISIEWASFIIFKLIYFVFFLIFSLVSTSAVVHTIASIYTSREVTLKKAM 132
           G P  + +I      +A  +I   + F  +    L+S +AVV+++   Y+ ++    K  
Sbjct: 106 GLP-LRPMIKQSCQRFADTVIASAMCFPLYATLLLLSKTAVVYSVDCTYSRKKFDGSKFC 164

Query: 133 GAVAKVWKSLVITFL--CTFAAFFIYNVVAGIVLFIWALTI---GENIYGMATLLVIGIL 187
             VAK W+ ++ T++  CT     I      +V F  AL +     N+   A L+V G++
Sbjct: 165 VIVAKFWRKILATYMWACTVIVGCITMFCVFLVAFCSALAVLGFSPNVVVYAALMV-GLV 223

Query: 188 YIVGFIYLAAVWQLANVVSMLEDSSGIKAMMKSNELIKGKKGLSLIITFMLSVFFFLIQF 247
           + V F     +  +A V+S+LED SG +AM++S+ LIKG+  + L+I    ++    ++ 
Sbjct: 224 FSVVFANAIIICSVALVISVLEDVSGAQAMLRSSILIKGQTQVGLLIYLGSTIGMAFVEG 283

Query: 248 LFSMVLLRLFHVGLVWKIASGVXXXXXXXXXXXXXXVIQTVLYFDCKSYHHE 299
           LF   +  L +     ++  G               ++  V YF C+S+  E
Sbjct: 284 LFEHRVKTLSYGDGSSRMWEGPLLVIMYSFVVLIDSMMSAVFYFSCRSFSME 335