Miyakogusa Predicted Gene

Lj0g3v0167769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0167769.1 Non Characterized Hit- tr|I1JCF2|I1JCF2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20341
PE,76.69,0,seg,NULL; TPR-like,NULL; Tetratricopeptide
repeats,Tetratricopeptide repeat; TPR_1,Tetratricopeptide,CUFF.10502.1
         (475 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g075260.1 | TPR superfamily protein | HC | chr8:31818432-3...   683   0.0  
Medtr7g058930.1 | male sterility MS5 family protein | HC | chr7:...   290   2e-78
Medtr2g030510.1 | TPR repeat protein, putative | HC | chr2:11504...   288   7e-78
Medtr7g059010.1 | male sterility MS5 family protein | HC | chr7:...   276   2e-74
Medtr7g059010.2 | male sterility MS5 family protein | HC | chr7:...   276   3e-74

>Medtr8g075260.1 | TPR superfamily protein | HC |
           chr8:31818432-31815891 | 20130731
          Length = 479

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/489 (73%), Positives = 386/489 (78%), Gaps = 24/489 (4%)

Query: 1   MLQEMWNAPPGFRXXXXXXXXXXXXLGVPRTRSESFHIAHKVPVGDTPYVRAKNVQLVEK 60
           M+QEMWNAPPGFR            LGVPRTRSESFHI HKVP+GDTPYVRAKNVQLV+K
Sbjct: 1   MMQEMWNAPPGFRPSKSAPSSPAKPLGVPRTRSESFHITHKVPIGDTPYVRAKNVQLVDK 60

Query: 61  DPERAIPLFWAAINAGDRVDSALKDMAILMKQQNRSEKAIEAIKSLRSRCSDQAQESLDN 120
           DPERAIPLFWAAINAGDRVDSALKDMAI+MKQQNR+E+AIEAIKSLRSRCSDQAQESLDN
Sbjct: 61  DPERAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDN 120

Query: 121 ILLDLYKRCGRLDDQIALLRHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLG 180
           ILLDLYKRCGRLDDQIALLRHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLG
Sbjct: 121 ILLDLYKRCGRLDDQIALLRHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLG 180

Query: 181 NLGWALMQQSNYMEAEEAYRRALSIAPDNNKMCNLGICLMKQGRVVEAKERLCRVKSAVH 240
           NLGWALMQQ+NY+EAEEAYRRAL +APDNNKMCNLGICLMKQGR+ EAKE L RVK AV 
Sbjct: 181 NLGWALMQQNNYIEAEEAYRRALCLAPDNNKMCNLGICLMKQGRIAEAKETLHRVKPAVT 240

Query: 241 DGPRGSDSHLKAYERAQQMLKDLQSERMNIGGGDRVEQRRLFEAFLGSSSIWQPQPCKD- 299
           DGPRGSDSHLKAYERAQQMLKDL+SE MN GG DR+EQ RLFEAFLGSSSIWQPQPCKD 
Sbjct: 241 DGPRGSDSHLKAYERAQQMLKDLESEMMNRGGVDRLEQSRLFEAFLGSSSIWQPQPCKDN 300

Query: 300 -HTS-----NSVKTTQDEFADENINSNI-MTKNHXXXXXXXXXXXXXLGNSLNVTAPPFY 352
            HTS      +  T QDEF DENINSN  + KN+             + NSLNV APPFY
Sbjct: 301 IHTSLPPMRTTSTTIQDEFGDENINSNTNIVKNY--TAQPQNKFTPLVNNSLNVAAPPFY 358

Query: 353 TSKPLVREPPNEN-HFAETLKRTRSGNAAVSMRVNDVGDFNKVNMELGVPLPENKTRRLS 411
            +K   +E  NEN + +E LKRTRSGNAA  +RV+DV   NKVN+ELGV  P NK RRLS
Sbjct: 359 AAKSSFKE-SNENLNLSERLKRTRSGNAAGLLRVDDVNS-NKVNVELGV--PGNKARRLS 414

Query: 412 SEDNNEKNKMVDLLPDNKDFEDXXXXXXXXXXXXXXXNDK----IFQKKTDK-RLKVFQD 466
                EKNK+ DLLPD KDFED                +     I  KK DK RLKVFQD
Sbjct: 415 F----EKNKLCDLLPDTKDFEDAILAAVLGSSNELENENAATSGICSKKIDKRRLKVFQD 470

Query: 467 ITLSLSPRA 475
           ITLSLSP+A
Sbjct: 471 ITLSLSPKA 479


>Medtr7g058930.1 | male sterility MS5 family protein | HC |
           chr7:21253696-21249411 | 20130731
          Length = 300

 Score =  290 bits (743), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 140/234 (59%), Positives = 180/234 (76%), Gaps = 4/234 (1%)

Query: 32  RSESFHIAHKVPVGDTPYVRAKNVQLVEKDPERAIPLFWAAINAGDRVDSALKDMAILMK 91
           + + +H+ +KVP GD+PYVRAK+ QLVEKDPE AI LFW AINAGD+VDSALKDMA++MK
Sbjct: 20  KEDIYHVLYKVPYGDSPYVRAKHAQLVEKDPEAAIVLFWKAINAGDKVDSALKDMAVVMK 79

Query: 92  QQNRSEKAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLRHKLYLIQQGLA 151
           Q +RSE+AIEAI S R  CS Q+QESLDN+L+DLYK+CG++D++I LL+ KL LI QG A
Sbjct: 80  QLDRSEEAIEAISSFRGLCSKQSQESLDNVLIDLYKKCGKIDEEIDLLKQKLKLIYQGEA 139

Query: 152 FNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQSNYMEAEEAYRRALSIAPDNNK 211
           FNGK TKTARS GKKFQVS++QE +RLLGNLGWA MQ+ NY+ AE  YR+A  I PD NK
Sbjct: 140 FNGKLTKTARSHGKKFQVSIKQETSRLLGNLGWAYMQKMNYVMAEAVYRKAQMIDPDCNK 199

Query: 212 MCNLGICLMKQGRVVEAKERLCRVKSAVHDGPRGSDSHLKAYERAQQMLKDLQS 265
            CNLG+CL++Q R  EA+     +   +  G       +K+ +RAQ +L++L+S
Sbjct: 200 ACNLGLCLIRQARYEEAQ----LIIDDILKGELPGSDDIKSKKRAQDLLEELRS 249


>Medtr2g030510.1 | TPR repeat protein, putative | HC |
           chr2:11504409-11508674 | 20130731
          Length = 617

 Score =  288 bits (737), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 136/230 (59%), Positives = 176/230 (76%), Gaps = 1/230 (0%)

Query: 36  FHIAHKVPVGDTPYVRAKNVQLVEKDPERAIPLFWAAINAGDRVDSALKDMAILMKQQNR 95
           FH+ HKVP GD+PYV+AK VQLV+KDP +AI LFWAAINAGDRV+SALKDMA++MKQ NR
Sbjct: 51  FHVIHKVPSGDSPYVKAKQVQLVDKDPGKAISLFWAAINAGDRVESALKDMALVMKQLNR 110

Query: 96  SEKAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLRHKLYLIQQGLAFNGK 155
           S++AIEAIKS R  C   +QESLDNIL++LYKR GR+D++I +L  KL  I+ G+ + G+
Sbjct: 111 SDEAIEAIKSFRHLCPSDSQESLDNILVELYKRSGRVDEEIGMLHQKLKQIEDGMTYVGR 170

Query: 156 RTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQSNYMEAEEAYRRALSIAPDNNKMCNL 215
            TK ARSQGKK Q+S EQE +R+LGNL WA +Q+ +Y  AEE YR+ALS   D NK CNL
Sbjct: 171 TTKHARSQGKKIQISAEQEISRILGNLAWAYLQKGDYKTAEEHYRKALSFEVDRNKQCNL 230

Query: 216 GICLMKQGRVVEAKERLCRVKSAVHDGPRGSDSHLKAYERAQQMLKDLQS 265
            ICLM+  +V EA+  L  V +A  +  +  DS +K+YERA QML++++S
Sbjct: 231 AICLMQMNKVTEARFLLQAVTAATKNR-KMDDSFVKSYERATQMLQEMES 279


>Medtr7g059010.1 | male sterility MS5 family protein | HC |
           chr7:21290335-21286538 | 20130731
          Length = 404

 Score =  276 bits (707), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/234 (58%), Positives = 177/234 (75%), Gaps = 4/234 (1%)

Query: 32  RSESFHIAHKVPVGDTPYVRAKNVQLVEKDPERAIPLFWAAINAGDRVDSALKDMAILMK 91
           + + +H+ HKVP GDTPYV+AK+ QLV+KDPE AI  FW AINAGD+VDSALKDMA++MK
Sbjct: 32  KEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMK 91

Query: 92  QQNRSEKAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLRHKLYLIQQGLA 151
           Q +R+E+AIEAIKS R  C+  +QESLDN+LLDLYK+CGR+++QI LL+ KL LI QG A
Sbjct: 92  QLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGEA 151

Query: 152 FNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQSNYMEAEEAYRRALSIAPDNNK 211
           FNG+ TKTARS GKKFQVS++QE  RLLGNLGWA MQ++NYM AE  +++A  I  D NK
Sbjct: 152 FNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADANK 211

Query: 212 MCNLGICLMKQGRVVEAKERLCRVKSAVHDGPRGSDSHLKAYERAQQMLKDLQS 265
             NL +CLM+Q R  EA   L +V   +     GSD  +K+  RA+++L +L +
Sbjct: 212 ALNLALCLMRQSRYEEAYLILEQV---LQGKLPGSD-EIKSRNRAEELLVELSA 261


>Medtr7g059010.2 | male sterility MS5 family protein | HC |
           chr7:21290300-21287093 | 20130731
          Length = 295

 Score =  276 bits (707), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 137/234 (58%), Positives = 177/234 (75%), Gaps = 4/234 (1%)

Query: 32  RSESFHIAHKVPVGDTPYVRAKNVQLVEKDPERAIPLFWAAINAGDRVDSALKDMAILMK 91
           + + +H+ HKVP GDTPYV+AK+ QLV+KDPE AI  FW AINAGD+VDSALKDMA++MK
Sbjct: 15  KEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMK 74

Query: 92  QQNRSEKAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLRHKLYLIQQGLA 151
           Q +R+E+AIEAIKS R  C+  +QESLDN+LLDLYK+CGR+++QI LL+ KL LI QG A
Sbjct: 75  QLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGEA 134

Query: 152 FNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQSNYMEAEEAYRRALSIAPDNNK 211
           FNG+ TKTARS GKKFQVS++QE  RLLGNLGWA MQ++NYM AE  +++A  I  D NK
Sbjct: 135 FNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADANK 194

Query: 212 MCNLGICLMKQGRVVEAKERLCRVKSAVHDGPRGSDSHLKAYERAQQMLKDLQS 265
             NL +CLM+Q R  EA   L +V   +     GSD  +K+  RA+++L +L +
Sbjct: 195 ALNLALCLMRQSRYEEAYLILEQV---LQGKLPGSD-EIKSRNRAEELLVELSA 244