Miyakogusa Predicted Gene

Lj0g3v0167659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0167659.1 Non Characterized Hit- tr|D8SQP6|D8SQP6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,28.57,7e-17,coiled-coil,NULL,CUFF.10493.1
         (242 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g015010.1 | transmembrane protein, putative | HC | chr4:43...   332   2e-91
Medtr7g067000.1 | transmembrane protein, putative | HC | chr7:24...   298   4e-81

>Medtr4g015010.1 | transmembrane protein, putative | HC |
           chr4:4329550-4327346 | 20130731
          Length = 275

 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 174/259 (67%), Positives = 208/259 (80%), Gaps = 17/259 (6%)

Query: 1   MISLKTL-HPSFLPTN--TTYSHLHTRNYT--------LCLC--NSNESDSQPPEPKGDV 47
           MI+LK + HP+F P+N  TT+S LH  + T        LCLC  NSN+      +P GDV
Sbjct: 14  MIALKAIFHPTFYPSNNTTTFSTLHPHHNTARRRSSVFLCLCSTNSNDEPDNNSKPGGDV 73

Query: 48  QSQELLAQIAMLQTQKVRLTDYLDERSEYLTQFGEEAKAEFDKVGEDALKGLDEASDRIT 107
           QSQELLAQ+AML+T+KVRLTDYLDERSEYLTQFGEEAKAE DK+GEDALKGLDEASDRIT
Sbjct: 74  QSQELLAQLAMLETEKVRLTDYLDERSEYLTQFGEEAKAEIDKIGEDALKGLDEASDRIT 133

Query: 108 ANIESQMLAFEESTELNKQEIQESESKITEFEGQMEKDRNEGLFFKNLGQQPP-VDQAKA 166
           A IES+MLAFEES EL++ E +ESE+K+ E EGQME DRNEGLFFKNLGQ+   VD+AKA
Sbjct: 134 AKIESEMLAFEESNELDRVEFEESENKVMEIEGQMEVDRNEGLFFKNLGQKGANVDKAKA 193

Query: 167 KEEVEKIKDV-AREKDGGKTRKNIYLFFMGLLAYGIVGSI--ASSSGTDWRKVSLLGAVL 223
           KEE+EK+KDV   EK+G KTRKN+YLFF+GL  YGIVGSI  +S S TDW++V++LGA+L
Sbjct: 194 KEEIEKMKDVTTSEKNGRKTRKNVYLFFIGLFTYGIVGSINVSSLSSTDWKRVAVLGAIL 253

Query: 224 VALFYQFINEQNKDKKKED 242
           +ALF QFI EQNKD  ++D
Sbjct: 254 LALFSQFIFEQNKDNNQKD 272


>Medtr7g067000.1 | transmembrane protein, putative | HC |
           chr7:24493567-24492713 | 20130731
          Length = 257

 Score =  298 bits (762), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 162/241 (67%), Positives = 190/241 (78%), Gaps = 8/241 (3%)

Query: 1   MISLKTLHPSF----LPTNTTYSHLH-TRNYTLCLCNSNESDSQPPEPKGDVQSQELLAQ 55
           MI+LK+LHPSF    +  N     LH TR+YTLCLC SN SDSQ P+P GD + QELLAQ
Sbjct: 1   MIALKSLHPSFKLNKIKCNIHCKRLHNTRSYTLCLCKSNGSDSQAPQP-GDTKKQELLAQ 59

Query: 56  IAMLQTQKVRLTDYLDERSEYLTQFGEEAKAEFDKVGEDALKGLDEASDRITANIESQML 115
           I  LQT+K+RLT+YLDERS YLTQFGE+A +EF+K+GEDALK LDEAS RITAN+ESQML
Sbjct: 60  IVTLQTRKIRLTEYLDERSAYLTQFGEKANSEFEKIGEDALKELDEASARITANMESQML 119

Query: 116 AFEESTELNKQEIQESESKITEFEGQMEKDRNEGLFFKNLGQQ-PPVDQAKAKEEVEKIK 174
            FEES E+N+QEIQE E+K+ EFE QME  RNEGLFFKNL ++ P VD+AKAKEE EKIK
Sbjct: 120 EFEESAEINRQEIQERENKLAEFEVQMENGRNEGLFFKNLRKKVPVVDKAKAKEEAEKIK 179

Query: 175 DVAREKDGGKTRKNIYLFFMGLLAYGIVGSIASSSGTDWRKVSLLGAVLVALFYQFINEQ 234
           DV R K G   RKN YLFF+GLL + +V SIAS S TDWRKV++ GA+LVAL  QF+ EQ
Sbjct: 180 DVTRLKAGSGIRKNAYLFFIGLLTFTVVYSIASPS-TDWRKVAVFGAILVALTSQFVYEQ 238

Query: 235 N 235
           N
Sbjct: 239 N 239